CircRNA Information

General Information
circRNA Basic Information
CircID chr16:29814854|29814964
Strand -
CircType exon
Host Gene ENSG00000167371.15;
Algorism CIRI2;
Sequence CTCCCTGCACTAATGCCTGCATCCCCTCCGGCCTCTTGGCCCCCTATCCCTGCACTTCTGGAAACCTCCCTGCACTCTGGAAACCTCCCTGAACACCTCCCCAACTCTGCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:29814854|29814964 hsa-miR-130a-5p 0 0 1
chr16:29814854|29814964 hsa-miR-130a-3p 0 0 1
chr16:29814854|29814964 hsa-miR-301a-5p 0 0 1
chr16:29814854|29814964 hsa-miR-301a-3p 0 0 1
chr16:29814854|29814964 hsa-miR-130b-5p 0 0 1
chr16:29814854|29814964 hsa-miR-130b-3p 0 0 1
chr16:29814854|29814964 hsa-miR-571 0 0 1
chr16:29814854|29814964 hsa-miR-454-5p 0 0 1
chr16:29814854|29814964 hsa-miR-454-3p 0 0 1
chr16:29814854|29814964 hsa-miR-301b-5p 0 0 1
chr16:29814854|29814964 hsa-miR-301b-3p 0 0 1
chr16:29814854|29814964 hsa-miR-939-5p 0 0 1
chr16:29814854|29814964 hsa-miR-939-3p 0 0 1
chr16:29814854|29814964 hsa-miR-1321 0 1 1
chr16:29814854|29814964 hsa-miR-525-5p 0 0 1
chr16:29814854|29814964 hsa-miR-520a-5p 0 0 1
chr16:29814854|29814964 hsa-miR-519b-3p 0 0 1
chr16:29814854|29814964 hsa-miR-519c-3p 0 0 1
chr16:29814854|29814964 hsa-miR-519a 0 0 1
chr16:29814854|29814964 hsa-miR-198 0 1 0
chr16:29814854|29814964 hsa-miR-608 1 0 0
chr16:29814854|29814964 hsa-miR-658 1 0 0
chr16:29814854|29814964 hsa-miR-762 1 0 0
chr16:29814854|29814964 hsa-miR-3147 1 0 0
chr16:29814854|29814964 hsa-miR-3175 1 0 0
chr16:29814854|29814964 hsa-miR-4257 1 0 0
chr16:29814854|29814964 hsa-miR-4259 1 1 0
chr16:29814854|29814964 hsa-miR-4270 1 1 0
chr16:29814854|29814964 hsa-miR-3652 1 0 0
chr16:29814854|29814964 hsa-miR-3936 1 0 0
chr16:29814854|29814964 hsa-miR-4441 0 1 0
chr16:29814854|29814964 hsa-miR-3689c 1 0 0
chr16:29814854|29814964 hsa-miR-4489 1 0 0
chr16:29814854|29814964 hsa-miR-2392 1 0 0
chr16:29814854|29814964 hsa-miR-4507 1 0 0
chr16:29814854|29814964 hsa-miR-4525 1 0 0
chr16:29814854|29814964 hsa-miR-4651 1 0 0
chr16:29814854|29814964 hsa-miR-4669 1 0 0
chr16:29814854|29814964 hsa-miR-4706 1 0 0
chr16:29814854|29814964 hsa-miR-4734 1 0 0
chr16:29814854|29814964 hsa-miR-4739 1 1 0
chr16:29814854|29814964 hsa-miR-4748 1 0 0
chr16:29814854|29814964 hsa-miR-5572 1 0 0
chr16:29814854|29814964 hsa-miR-5787 1 0 0
chr16:29814854|29814964 hsa-miR-6086 1 0 0
chr16:29814854|29814964 hsa-miR-6127 1 0 0
chr16:29814854|29814964 hsa-miR-6132 1 0 0
chr16:29814854|29814964 hsa-miR-6133 1 0 0
chr16:29814854|29814964 hsa-miR-12127 0 1 0
chr16:29814854|29814964 hsa-miR-12128 0 1 0
chr16:29814854|29814964 hsa-miR-12131 1 0 0
chr16:29814854|29814964 hsa-miR-211-3p 1 0 0
chr16:29814854|29814964 hsa-miR-6734-5p 1 0 0
chr16:29814854|29814964 hsa-miR-504-3p 1 1 0
chr16:29814854|29814964 hsa-miR-6747-5p 1 0 0
chr16:29814854|29814964 hsa-miR-3150a-3p 1 1 0
chr16:29814854|29814964 hsa-miR-7106-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6825-5p 1 1 0
chr16:29814854|29814964 hsa-miR-6857-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6799-5p 1 1 0
chr16:29814854|29814964 hsa-miR-6728-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6804-5p 1 0 0
chr16:29814854|29814964 hsa-miR-5187-5p 1 0 0
chr16:29814854|29814964 hsa-miR-1227-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6089 1 1 0
chr16:29814854|29814964 hsa-miR-3192-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6757-5p 1 1 0
chr16:29814854|29814964 hsa-miR-4695-5p 1 0 0
chr16:29814854|29814964 hsa-miR-4722-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6806-5p 0 1 0
chr16:29814854|29814964 hsa-miR-197-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6776-5p 1 0 0
chr16:29814854|29814964 hsa-miR-3180-3p 1 0 0
chr16:29814854|29814964 hsa-miR-6732-5p 1 1 0
chr16:29814854|29814964 hsa-miR-6805-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6798-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6760-5p 1 0 0
chr16:29814854|29814964 hsa-miR-2467-3p 1 0 0
chr16:29814854|29814964 hsa-miR-6782-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6810-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6740-5p 1 0 0
chr16:29814854|29814964 hsa-miR-1229-5p 1 0 0
chr16:29814854|29814964 hsa-miR-4640-5p 1 0 0
chr16:29814854|29814964 hsa-miR-1228-5p 1 0 0
chr16:29814854|29814964 hsa-miR-296-3p 1 0 0
chr16:29814854|29814964 hsa-miR-6771-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6823-5p 1 0 0
chr16:29814854|29814964 hsa-miR-4713-3p 1 0 0
chr16:29814854|29814964 hsa-miR-4743-5p 1 1 0
chr16:29814854|29814964 hsa-miR-4787-5p 1 0 0
chr16:29814854|29814964 hsa-miR-149-3p 1 0 0
chr16:29814854|29814964 hsa-miR-6824-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6789-5p 1 0 0
chr16:29814854|29814964 hsa-miR-3162-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6781-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6877-5p 1 0 0
chr16:29814854|29814964 hsa-miR-5010-5p 1 0 0
chr16:29814854|29814964 hsa-miR-664b-5p 1 0 0
chr16:29814854|29814964 hsa-miR-7113-5p 1 0 0
chr16:29814854|29814964 hsa-miR-1207-5p 1 0 0
chr16:29814854|29814964 hsa-miR-1273h-5p 1 0 0
chr16:29814854|29814964 hsa-miR-3689b-3p 1 0 0
chr16:29814854|29814964 hsa-miR-4763-3p 1 0 0
chr16:29814854|29814964 hsa-miR-6769b-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6778-5p 1 0 0
chr16:29814854|29814964 hsa-miR-1343-5p 1 0 0
chr16:29814854|29814964 hsa-miR-3180 1 0 0
chr16:29814854|29814964 hsa-miR-6726-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6737-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6743-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6752-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6754-5p 1 1 0
chr16:29814854|29814964 hsa-miR-6756-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6803-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6819-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6851-5p 1 1 0
chr16:29814854|29814964 hsa-miR-7110-5p 1 0 0
chr16:29814854|29814964 hsa-miR-1249-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6722-3p 1 1 0
chr16:29814854|29814964 hsa-miR-6751-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6763-5p 1 1 0
chr16:29814854|29814964 hsa-miR-6780a-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6797-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6879-5p 1 0 0
chr16:29814854|29814964 hsa-miR-7111-5p 1 0 0
chr16:29814854|29814964 hsa-miR-4728-5p 1 0 0
chr16:29814854|29814964 hsa-miR-5196-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6836-5p 1 0 0
chr16:29814854|29814964 hsa-miR-10526-3p 1 0 0
chr16:29814854|29814964 hsa-miR-1237-5p 1 0 0
chr16:29814854|29814964 hsa-miR-1909-3p 1 0 0
chr16:29814854|29814964 hsa-miR-328-5p 1 0 0
chr16:29814854|29814964 hsa-miR-3689a-3p 1 0 0
chr16:29814854|29814964 hsa-miR-4726-5p 1 0 0
chr16:29814854|29814964 hsa-miR-4749-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6738-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6777-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6794-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6795-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6846-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6848-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6858-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6883-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6887-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6889-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6845-5p 0 1 0
chr16:29814854|29814964 hsa-miR-6511b-5p 1 1 0
chr16:29814854|29814964 hsa-miR-3940-5p 1 0 0
chr16:29814854|29814964 hsa-miR-1914-3p 1 0 0
chr16:29814854|29814964 hsa-miR-6855-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6785-5p 1 0 0
chr16:29814854|29814964 hsa-miR-4667-5p 1 0 0
chr16:29814854|29814964 hsa-miR-6762-5p 1 1 0
chr16:29814854|29814964 hsa-miR-4756-5p 0 1 0
chr16:29814854|29814964 hsa-miR-135a-2-3p 1 1 0
chr16:29814854|29814964 hsa-miR-6811-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:29814854|29814964
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MPASPPASWPPIPALLETSLHSGNLPEHLPNSA
Nucleotide Sequence ATGCCTGCATCCCCTCCGGCCTCTTGGCCCCCTATCCCTGCACTTCTGGAAACCTCCCTGCACTCTGGAAACCTCCCTGAACACCTCCCCAACTCTGCG
CircID chr16:29814854|29814964
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MHPLRPLGPLSLHFWKPPCTLETSLNTSPTL
Nucleotide Sequence CTGCATCCCCTCCGGCCTCTTGGCCCCCTATCCCTGCACTTCTGGAAACCTCCCTGCACTCTGGAAACCTCCCTGAACACCTCCCCAACTCTG
CircID chr16:29814854|29814964
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MGRCSGRFPECREVSRSAGIGGQEAGGDAGISAG
Nucleotide Sequence TTGGGGAGGTGTTCAGGGAGGTTTCCAGAGTGCAGGGAGGTTTCCAGAAGTGCAGGGATAGGGGGCCAAGAGGCCGGAGGGGATGCAGGCATTAGTGCAGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab