CircRNA Information

General Information
circRNA Basic Information
CircID chr16:29833815|29834066
Strand +
CircType exon
Host Gene ENSG00000013364.17;
Algorism CIRI2;
Sequence CTGTCACCCTCTCCTTGCCGTCCCGGTCCCAGCACTCCTTGCGGGCCCTGAGCCGCAGAGCCTGGTTCTGCCTGATGATGGTGGCCTGAATGATCTCCACGACCTCCACTTCCTTCCGGGGGATGTACGTGCCTGGGGAGGGAAGGTGATGGTCAGAAGGTATCAGGGCTATGACAGGAAGGCAGGGAGCCCTATGGAGACAGAACTTACCAGGTCCCTCGAAAAGCCACTCATCTCCTGCCACCACCTTGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:29833815|29834066 hsa-miR-143-5p 0 0 1
chr16:29833815|29834066 hsa-miR-143-3p 0 0 1
chr16:29833815|29834066 hsa-miR-136-5p 0 0 1
chr16:29833815|29834066 hsa-miR-136-3p 0 0 1
chr16:29833815|29834066 hsa-miR-484 0 0 1
chr16:29833815|29834066 hsa-miR-492 0 0 1
chr16:29833815|29834066 hsa-miR-591 0 0 1
chr16:29833815|29834066 hsa-miR-620 0 0 1
chr16:29833815|29834066 hsa-miR-624-5p 0 0 1
chr16:29833815|29834066 hsa-miR-624-3p 0 0 1
chr16:29833815|29834066 hsa-miR-631 0 0 1
chr16:29833815|29834066 hsa-miR-760 1 1 1
chr16:29833815|29834066 hsa-miR-1237-5p 0 0 1
chr16:29833815|29834066 hsa-miR-1237-3p 0 0 1
chr16:29833815|29834066 hsa-miR-1266-5p 0 0 1
chr16:29833815|29834066 hsa-miR-1266-3p 0 0 1
chr16:29833815|29834066 hsa-miR-1270 0 0 1
chr16:29833815|29834066 hsa-miR-1252-5p 0 0 1
chr16:29833815|29834066 hsa-miR-1252-3p 0 0 1
chr16:29833815|29834066 hsa-miR-512-3p 0 0 1
chr16:29833815|29834066 hsa-miR-1207-5p 1 1 1
chr16:29833815|29834066 hsa-miR-542-3p 0 0 1
chr16:29833815|29834066 hsa-miR-642 0 0 1
chr16:29833815|29834066 hsa-miR-129-3p 0 0 1
chr16:29833815|29834066 hsa-miR-24 0 0 1
chr16:29833815|29834066 hsa-miR-608 1 0 0
chr16:29833815|29834066 hsa-miR-638 1 0 0
chr16:29833815|29834066 hsa-miR-762 1 0 0
chr16:29833815|29834066 hsa-miR-298 1 0 0
chr16:29833815|29834066 hsa-miR-1293 1 0 0
chr16:29833815|29834066 hsa-miR-1248 0 1 0
chr16:29833815|29834066 hsa-miR-3155a 0 1 0
chr16:29833815|29834066 hsa-miR-3196 1 0 0
chr16:29833815|29834066 hsa-miR-4297 0 1 0
chr16:29833815|29834066 hsa-miR-4269 0 1 0
chr16:29833815|29834066 hsa-miR-4270 1 0 0
chr16:29833815|29834066 hsa-miR-3918 1 1 0
chr16:29833815|29834066 hsa-miR-4428 0 1 0
chr16:29833815|29834066 hsa-miR-4440 0 1 0
chr16:29833815|29834066 hsa-miR-3155b 0 1 0
chr16:29833815|29834066 hsa-miR-4488 1 0 0
chr16:29833815|29834066 hsa-miR-4497 1 0 0
chr16:29833815|29834066 hsa-miR-4498 1 0 0
chr16:29833815|29834066 hsa-miR-4514 0 1 0
chr16:29833815|29834066 hsa-miR-4518 1 1 0
chr16:29833815|29834066 hsa-miR-4533 1 1 0
chr16:29833815|29834066 hsa-miR-3960 1 0 0
chr16:29833815|29834066 hsa-miR-4654 1 0 0
chr16:29833815|29834066 hsa-miR-4673 0 1 0
chr16:29833815|29834066 hsa-miR-4674 1 0 0
chr16:29833815|29834066 hsa-miR-4683 1 0 0
chr16:29833815|29834066 hsa-miR-4739 1 0 0
chr16:29833815|29834066 hsa-miR-5090 1 0 0
chr16:29833815|29834066 hsa-miR-5787 1 0 0
chr16:29833815|29834066 hsa-miR-6165 1 1 0
chr16:29833815|29834066 hsa-miR-7150 1 1 0
chr16:29833815|29834066 hsa-miR-7976 0 1 0
chr16:29833815|29834066 hsa-miR-8052 1 0 0
chr16:29833815|29834066 hsa-miR-8077 1 0 0
chr16:29833815|29834066 hsa-miR-8089 1 0 0
chr16:29833815|29834066 hsa-miR-12115 0 1 0
chr16:29833815|29834066 hsa-miR-4433b-3p 1 1 0
chr16:29833815|29834066 hsa-miR-4731-5p 1 0 0
chr16:29833815|29834066 hsa-miR-504-3p 1 1 0
chr16:29833815|29834066 hsa-miR-3194-3p 0 1 0
chr16:29833815|29834066 hsa-miR-6747-3p 0 1 0
chr16:29833815|29834066 hsa-miR-6809-5p 0 1 0
chr16:29833815|29834066 hsa-miR-4433a-3p 1 0 0
chr16:29833815|29834066 hsa-miR-6765-5p 1 0 0
chr16:29833815|29834066 hsa-miR-215-3p 0 1 0
chr16:29833815|29834066 hsa-miR-7106-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6857-5p 1 1 0
chr16:29833815|29834066 hsa-miR-1972 1 0 0
chr16:29833815|29834066 hsa-miR-6510-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6089 1 0 0
chr16:29833815|29834066 hsa-miR-7847-3p 0 1 0
chr16:29833815|29834066 hsa-miR-6746-5p 1 0 0
chr16:29833815|29834066 hsa-miR-24-3p 0 1 0
chr16:29833815|29834066 hsa-miR-6840-5p 0 1 0
chr16:29833815|29834066 hsa-miR-6727-5p 1 0 0
chr16:29833815|29834066 hsa-miR-4655-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6716-5p 1 0 0
chr16:29833815|29834066 hsa-miR-1292-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6829-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6732-5p 1 0 0
chr16:29833815|29834066 hsa-miR-2467-3p 1 0 0
chr16:29833815|29834066 hsa-miR-6782-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6850-5p 1 0 0
chr16:29833815|29834066 hsa-miR-3934-3p 1 0 0
chr16:29833815|29834066 hsa-miR-6884-3p 0 1 0
chr16:29833815|29834066 hsa-miR-5088-5p 1 0 0
chr16:29833815|29834066 hsa-miR-542-5p 1 0 0
chr16:29833815|29834066 hsa-miR-1908-3p 1 0 0
chr16:29833815|29834066 hsa-miR-6784-5p 1 0 0
chr16:29833815|29834066 hsa-miR-3127-5p 1 1 0
chr16:29833815|29834066 hsa-miR-1908-5p 1 0 0
chr16:29833815|29834066 hsa-miR-7113-3p 0 1 0
chr16:29833815|29834066 hsa-miR-3667-3p 0 1 0
chr16:29833815|29834066 hsa-miR-6771-5p 1 0 0
chr16:29833815|29834066 hsa-miR-92b-5p 1 1 0
chr16:29833815|29834066 hsa-miR-4743-3p 0 1 0
chr16:29833815|29834066 hsa-miR-103b 0 1 0
chr16:29833815|29834066 hsa-miR-4776-5p 1 0 0
chr16:29833815|29834066 hsa-miR-7106-3p 0 1 0
chr16:29833815|29834066 hsa-miR-1911-3p 0 1 0
chr16:29833815|29834066 hsa-miR-1295b-3p 1 0 0
chr16:29833815|29834066 hsa-miR-6880-3p 0 1 0
chr16:29833815|29834066 hsa-miR-6734-3p 0 1 0
chr16:29833815|29834066 hsa-miR-6888-3p 0 1 0
chr16:29833815|29834066 hsa-miR-885-5p 0 1 0
chr16:29833815|29834066 hsa-miR-4763-3p 1 0 0
chr16:29833815|29834066 hsa-miR-6865-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6870-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6726-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6754-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6756-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6851-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6722-3p 1 0 0
chr16:29833815|29834066 hsa-miR-6808-5p 1 0 0
chr16:29833815|29834066 hsa-miR-320a-5p 0 1 0
chr16:29833815|29834066 hsa-miR-6836-5p 1 0 0
chr16:29833815|29834066 hsa-miR-1909-3p 1 0 0
chr16:29833815|29834066 hsa-miR-328-5p 1 0 0
chr16:29833815|29834066 hsa-miR-4745-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6794-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6848-5p 1 0 0
chr16:29833815|29834066 hsa-miR-939-5p 1 0 0
chr16:29833815|29834066 hsa-miR-4758-5p 1 0 0
chr16:29833815|29834066 hsa-miR-10394-3p 1 0 0
chr16:29833815|29834066 hsa-miR-1910-3p 0 1 0
chr16:29833815|29834066 hsa-miR-6511a-5p 0 1 0
chr16:29833815|29834066 hsa-miR-7843-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6785-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6724-5p 1 0 0
chr16:29833815|29834066 hsa-miR-10398-5p 0 1 0
chr16:29833815|29834066 hsa-miR-6529-5p 1 0 0
chr16:29833815|29834066 hsa-miR-6837-5p 1 1 0
chr16:29833815|29834066 hsa-miR-11181-5p 0 1 0
chr16:29833815|29834066 hsa-miR-4724-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:29833815|29834066
ORF Type ORF1
Protein Length 63
Nucleotide Length 189
Protein Sequence MVLPDDGGLNDLHDLHFLPGDVRAWGGKVMVRRYQGYDRKAGSPMETELTRSLEKPLISCHHL
Nucleotide Sequence CTGGTTCTGCCTGATGATGGTGGCCTGAATGATCTCCACGACCTCCACTTCCTTCCGGGGGATGTACGTGCCTGGGGAGGGAAGGTGATGGTCAGAAGGTATCAGGGCTATGACAGGAAGGCAGGGAGCCCTATGGAGACAGAACTTACCAGGTCCCTCGAAAAGCCACTCATCTCCTGCCACCACCTT
CircID chr16:29833815|29834066
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MTGRQGALWRQNLPGPSKSHSSPATTL
Nucleotide Sequence ATGACAGGAAGGCAGGGAGCCCTATGGAGACAGAACTTACCAGGTCCCTCGAAAAGCCACTCATCTCCTGCCACCACCTTG
CircID chr16:29833815|29834066
ORF Type ORF3
Protein Length 50
Nucleotide Length 153
Protein Sequence MTITFPPQARTSPGRKWRSWRSFRPPSSGRTRLCGSGPARSAGTGTARRG
Nucleotide Sequence CTGACCATCACCTTCCCTCCCCAGGCACGTACATCCCCCGGAAGGAAGTGGAGGTCGTGGAGATCATTCAGGCCACCATCATCAGGCAGAACCAGGCTCTGCGGCTCAGGGCCCGCAAGGAGTGCTGGGACCGGGACGGCAAGGAGAGGGTGA
CircID chr16:29833815|29834066
ORF Type ORF4
Protein Length 55
Nucleotide Length 165
Protein Sequence MIPSDHHLPSPGTYIPRKEVEVVEIIQATIIRQNQALRLRARKECWDRDGKERVT
Nucleotide Sequence CTGATACCTTCTGACCATCACCTTCCCTCCCCAGGCACGTACATCCCCCGGAAGGAAGTGGAGGTCGTGGAGATCATTCAGGCCACCATCATCAGGCAGAACCAGGCTCTGCGGCTCAGGGCCCGCAAGGAGTGCTGGGACCGGGACGGCAAGGAGAGGGTGACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab