CircRNA Information

General Information
circRNA Basic Information
CircID chr16:30069616|30070010
Strand +
CircType exon
Host Gene ENSG00000149925.15;
Algorism CIRI2;
Sequence TCCTCCTGCGCAGCCTTCAGGTTCTCCTTCTTCCCGCCCCAGGCCTTCAGGGCAGAGGCCTGCAGGGCTCGGCCGTAGGAGAAGGTCAGGGCCCAGGGCTTCAGCAGGGGGCACTTGTTAATGGCATTGAGGTTGATGGACGCCTCCTCCTCACTCTGGCCTCCAGACAGGAAGGTGATCCCTGTAGAGCAGGGGTGAGGCGAGAGGGGCTGTGGTCAGAGACCCAGGAAGCTGGCAGGAGCTGGTGGAAGTTGCCATGGAAATCCGTCCAAATGGGCATAGGGTTGTGGGTGGAGCTTATCTACTGCATAGAGATCAAGATGAGTGTGGGCCTCACCAGTGACAGCGGGGGGCACTGTGCGGCGCAGCGCTGTGACGGTCGCCATGGCAATCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:30069616|30070010 hsa-miR-184 0 0 1
chr16:30069616|30070010 hsa-miR-370-5p 0 0 1
chr16:30069616|30070010 hsa-miR-370-3p 0 0 1
chr16:30069616|30070010 hsa-miR-577 0 0 1
chr16:30069616|30070010 hsa-miR-587 0 0 1
chr16:30069616|30070010 hsa-miR-589-5p 0 0 1
chr16:30069616|30070010 hsa-miR-589-3p 0 0 1
chr16:30069616|30070010 hsa-miR-593-5p 0 0 1
chr16:30069616|30070010 hsa-miR-593-3p 0 0 1
chr16:30069616|30070010 hsa-miR-604 0 0 1
chr16:30069616|30070010 hsa-miR-650 0 0 1
chr16:30069616|30070010 hsa-miR-661 1 1 1
chr16:30069616|30070010 hsa-miR-668-5p 0 0 1
chr16:30069616|30070010 hsa-miR-668-3p 0 0 1
chr16:30069616|30070010 hsa-miR-765 0 0 1
chr16:30069616|30070010 hsa-miR-874-5p 0 0 1
chr16:30069616|30070010 hsa-miR-874-3p 0 0 1
chr16:30069616|30070010 hsa-miR-891b 0 0 1
chr16:30069616|30070010 hsa-miR-936 0 0 1
chr16:30069616|30070010 hsa-miR-1226-5p 0 0 1
chr16:30069616|30070010 hsa-miR-1226-3p 0 0 1
chr16:30069616|30070010 hsa-miR-1231 0 1 1
chr16:30069616|30070010 hsa-miR-1202 0 1 1
chr16:30069616|30070010 hsa-miR-1205 0 1 1
chr16:30069616|30070010 hsa-miR-1291 0 1 1
chr16:30069616|30070010 hsa-miR-1281 0 0 1
chr16:30069616|30070010 hsa-miR-139-5p 0 0 1
chr16:30069616|30070010 hsa-miR-296-5p 0 0 1
chr16:30069616|30070010 hsa-miR-615-3p 0 1 1
chr16:30069616|30070010 hsa-miR-193a-5p 0 0 1
chr16:30069616|30070010 hsa-miR-146b-3p 0 0 1
chr16:30069616|30070010 hsa-miR-140-3p 0 0 1
chr16:30069616|30070010 hsa-miR-324-3p 0 0 1
chr16:30069616|30070010 hsa-miR-876-5p 0 0 1
chr16:30069616|30070010 hsa-miR-516a-3p 0 0 1
chr16:30069616|30070010 hsa-miR-1233 0 0 1
chr16:30069616|30070010 hsa-miR-128 0 0 1
chr16:30069616|30070010 hsa-miR-516b 0 0 1
chr16:30069616|30070010 hsa-miR-1273 0 0 1
chr16:30069616|30070010 hsa-miR-638 1 0 0
chr16:30069616|30070010 hsa-miR-1248 0 1 0
chr16:30069616|30070010 hsa-miR-1913 0 1 0
chr16:30069616|30070010 hsa-miR-1976 0 1 0
chr16:30069616|30070010 hsa-miR-2861 1 0 0
chr16:30069616|30070010 hsa-miR-3141 1 0 0
chr16:30069616|30070010 hsa-miR-3154 0 1 0
chr16:30069616|30070010 hsa-miR-3185 0 1 0
chr16:30069616|30070010 hsa-miR-3196 0 1 0
chr16:30069616|30070010 hsa-miR-4297 0 1 0
chr16:30069616|30070010 hsa-miR-4292 0 1 0
chr16:30069616|30070010 hsa-miR-3935 0 1 0
chr16:30069616|30070010 hsa-miR-4421 0 1 0
chr16:30069616|30070010 hsa-miR-4443 0 1 0
chr16:30069616|30070010 hsa-miR-3972 0 1 0
chr16:30069616|30070010 hsa-miR-4706 1 1 0
chr16:30069616|30070010 hsa-miR-4739 1 0 0
chr16:30069616|30070010 hsa-miR-5787 1 0 0
chr16:30069616|30070010 hsa-miR-6126 0 1 0
chr16:30069616|30070010 hsa-miR-6127 1 0 0
chr16:30069616|30070010 hsa-miR-7974 1 0 0
chr16:30069616|30070010 hsa-miR-7976 0 1 0
chr16:30069616|30070010 hsa-miR-12122 0 1 0
chr16:30069616|30070010 hsa-miR-18a-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6765-5p 1 0 0
chr16:30069616|30070010 hsa-miR-7106-5p 0 1 0
chr16:30069616|30070010 hsa-miR-6894-5p 1 0 0
chr16:30069616|30070010 hsa-miR-766-3p 1 0 0
chr16:30069616|30070010 hsa-miR-6892-3p 1 1 0
chr16:30069616|30070010 hsa-miR-6089 1 1 0
chr16:30069616|30070010 hsa-miR-6757-5p 1 0 0
chr16:30069616|30070010 hsa-miR-7160-5p 1 1 0
chr16:30069616|30070010 hsa-miR-6762-3p 1 0 0
chr16:30069616|30070010 hsa-miR-3187-3p 1 0 0
chr16:30069616|30070010 hsa-miR-7110-3p 0 1 0
chr16:30069616|30070010 hsa-miR-7855-5p 0 1 0
chr16:30069616|30070010 hsa-miR-5008-5p 0 1 0
chr16:30069616|30070010 hsa-miR-345-3p 0 1 0
chr16:30069616|30070010 hsa-miR-4436b-5p 1 0 0
chr16:30069616|30070010 hsa-miR-1343-3p 1 1 0
chr16:30069616|30070010 hsa-miR-6852-5p 0 1 0
chr16:30069616|30070010 hsa-miR-939-3p 1 1 0
chr16:30069616|30070010 hsa-miR-3186-5p 0 1 0
chr16:30069616|30070010 hsa-miR-5001-3p 1 0 0
chr16:30069616|30070010 hsa-miR-3667-3p 0 1 0
chr16:30069616|30070010 hsa-miR-3677-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6749-5p 1 0 0
chr16:30069616|30070010 hsa-miR-4743-5p 0 1 0
chr16:30069616|30070010 hsa-miR-149-3p 1 0 0
chr16:30069616|30070010 hsa-miR-6736-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6789-5p 1 0 0
chr16:30069616|30070010 hsa-miR-4640-3p 1 0 0
chr16:30069616|30070010 hsa-miR-7843-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6878-5p 0 1 0
chr16:30069616|30070010 hsa-miR-6769a-3p 0 1 0
chr16:30069616|30070010 hsa-miR-516b-5p 0 1 0
chr16:30069616|30070010 hsa-miR-4776-3p 0 1 0
chr16:30069616|30070010 hsa-miR-4732-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6801-5p 0 1 0
chr16:30069616|30070010 hsa-miR-216a-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6856-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6886-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6773-3p 0 1 0
chr16:30069616|30070010 hsa-miR-4749-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6802-3p 0 1 0
chr16:30069616|30070010 hsa-miR-7152-5p 0 1 0
chr16:30069616|30070010 hsa-miR-1229-3p 0 1 0
chr16:30069616|30070010 hsa-miR-4750-3p 1 0 0
chr16:30069616|30070010 hsa-miR-3173-5p 0 1 0
chr16:30069616|30070010 hsa-miR-6779-3p 0 1 0
chr16:30069616|30070010 hsa-miR-371b-3p 0 1 0
chr16:30069616|30070010 hsa-miR-4727-5p 1 1 0
chr16:30069616|30070010 hsa-miR-4787-3p 1 1 0
chr16:30069616|30070010 hsa-miR-4650-5p 0 1 0
chr16:30069616|30070010 hsa-miR-6787-5p 1 0 0
chr16:30069616|30070010 hsa-miR-6812-5p 0 1 0
chr16:30069616|30070010 hsa-miR-6816-5p 1 0 0
chr16:30069616|30070010 hsa-miR-6754-5p 1 0 0
chr16:30069616|30070010 hsa-miR-6756-5p 1 0 0
chr16:30069616|30070010 hsa-miR-7107-5p 1 1 0
chr16:30069616|30070010 hsa-miR-11181-3p 0 1 0
chr16:30069616|30070010 hsa-miR-320a-5p 0 1 0
chr16:30069616|30070010 hsa-miR-1237-5p 1 0 0
chr16:30069616|30070010 hsa-miR-6858-5p 0 1 0
chr16:30069616|30070010 hsa-miR-6799-3p 1 1 0
chr16:30069616|30070010 hsa-miR-6877-3p 0 1 0
chr16:30069616|30070010 hsa-miR-4646-5p 1 0 0
chr16:30069616|30070010 hsa-miR-4667-5p 1 0 0
chr16:30069616|30070010 hsa-miR-302d-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6791-5p 1 1 0
chr16:30069616|30070010 hsa-miR-4722-3p 1 1 0
chr16:30069616|30070010 hsa-miR-6727-3p 0 1 0
chr16:30069616|30070010 hsa-miR-4757-5p 0 1 0
chr16:30069616|30070010 hsa-miR-6784-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6862-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6801-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6810-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6775-3p 1 1 0
chr16:30069616|30070010 hsa-miR-10392-3p 1 0 0
chr16:30069616|30070010 hsa-miR-11181-5p 0 1 0
chr16:30069616|30070010 hsa-miR-4723-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6769b-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6819-3p 1 1 0
chr16:30069616|30070010 hsa-miR-4756-5p 1 0 0
chr16:30069616|30070010 hsa-miR-6744-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6783-3p 0 1 0
chr16:30069616|30070010 hsa-miR-10394-5p 0 1 0
chr16:30069616|30070010 hsa-miR-515-3p 0 1 0
chr16:30069616|30070010 hsa-miR-6811-5p 0 1 0
chr16:30069616|30070010 hsa-miR-519e-3p 0 1 0
chr16:30069616|30070010 hsa-miR-520e-3p 0 1 0
chr16:30069616|30070010 hsa-miR-519a-2-5p 0 1 0
chr16:30069616|30070010 hsa-miR-520b-5p 0 1 0
chr16:30069616|30070010 hsa-miR-520b-3p 0 1 0
chr16:30069616|30070010 hsa-miR-520c-3p 0 1 0
chr16:30069616|30070010 hsa-miR-3681-3p 0 1 0
chr16:30069616|30070010 hsa-miR-301b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:30069616|30070010
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MLMALRLMDASSSLWPPDRKVIPVEQG
Nucleotide Sequence TTGTTAATGGCATTGAGGTTGATGGACGCCTCCTCCTCACTCTGGCCTCCAGACAGGAAGGTGATCCCTGTAGAGCAGGGGTGA

CircID chr16:30069616|30070010
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MVEVAMEIRPNGHRVVGGAYLLHRDQDECGPHQ
Nucleotide Sequence CTGGTGGAAGTTGCCATGGAAATCCGTCCAAATGGGCATAGGGTTGTGGGTGGAGCTTATCTACTGCATAGAGATCAAGATGAGTGTGGGCCTCACCAGTGA

CircID chr16:30069616|30070010
ORF Type ORF3
Protein Length 130
Nucleotide Length 390
Protein Sequence MRSLQVLLLPAPGLQGRGLQGSAVGEGQGPGLQQGALVNGIEVDGRLLLTLASRQEGDPCRAGVRREGLWSETQEAGRSWWKLPWKSVQMGIGLWVELIYCIEIKMSVGLTSDSGGHCAAQRCDGRHGNL
Nucleotide Sequence CTGCGCAGCCTTCAGGTTCTCCTTCTTCCCGCCCCAGGCCTTCAGGGCAGAGGCCTGCAGGGCTCGGCCGTAGGAGAAGGTCAGGGCCCAGGGCTTCAGCAGGGGGCACTTGTTAATGGCATTGAGGTTGATGGACGCCTCCTCCTCACTCTGGCCTCCAGACAGGAAGGTGATCCCTGTAGAGCAGGGGTGAGGCGAGAGGGGCTGTGGTCAGAGACCCAGGAAGCTGGCAGGAGCTGGTGGAAGTTGCCATGGAAATCCGTCCAAATGGGCATAGGGTTGTGGGTGGAGCTTATCTACTGCATAGAGATCAAGATGAGTGTGGGCCTCACCAGTGACAGCGGGGGGCACTGTGCGGCGCAGCGCTGTGACGGTCGCCATGGCAATCTC

CircID chr16:30069616|30070010
ORF Type ORF4
Protein Length 56
Nucleotide Length 171
Protein Sequence MATVTALRRTVPPAVTGEAHTHLDLYAVDKLHPQPYAHLDGFPWQLPPAPASFLGL
Nucleotide Sequence ATGGCGACCGTCACAGCGCTGCGCCGCACAGTGCCCCCCGCTGTCACTGGTGAGGCCCACACTCATCTTGATCTCTATGCAGTAGATAAGCTCCACCCACAACCCTATGCCCATTTGGACGGATTTCCATGGCAACTTCCACCAGCTCCTGCCAGCTTCCTGGGTCTCTGA

CircID chr16:30069616|30070010
ORF Type ORF5
Protein Length 56
Nucleotide Length 168
Protein Sequence MSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQE
Nucleotide Sequence CTGTCTGGAGGCCAGAGTGAGGAGGAGGCGTCCATCAACCTCAATGCCATTAACAAGTGCCCCCTGCTGAAGCCCTGGGCCCTGACCTTCTCCTACGGCCGAGCCCTGCAGGCCTCTGCCCTGAAGGCCTGGGGCGGGAAGAAGGAGAACCTGAAGGCTGCGCAGGAG

CircID chr16:30069616|30070010
ORF Type ORF6
Protein Length 29
Nucleotide Length 90
Protein Sequence MPWRPSQRCAAQCPPLSLVRPTLILISMQ
Nucleotide Sequence TTGCCATGGCGACCGTCACAGCGCTGCGCCGCACAGTGCCCCCCGCTGTCACTGGTGAGGCCCACACTCATCTTGATCTCTATGCAGTAG

CircID chr16:30069616|30070010
ORF Type ORF7
Protein Length 59
Nucleotide Length 180
Protein Sequence MPIWTDFHGNFHQLLPASWVSDHSPSRLTPALQGSPSCLEARVRRRRPSTSMPLTSAPC
Nucleotide Sequence ATGCCCATTTGGACGGATTTCCATGGCAACTTCCACCAGCTCCTGCCAGCTTCCTGGGTCTCTGACCACAGCCCCTCTCGCCTCACCCCTGCTCTACAGGGATCACCTTCCTGTCTGGAGGCCAGAGTGAGGAGGAGGCGTCCATCAACCTCAATGCCATTAACAAGTGCCCCCTGCTGA

CircID chr16:30069616|30070010
ORF Type ORF8
Protein Length 35
Nucleotide Length 108
Protein Sequence MATSTSSCQLPGSLTTAPLASPLLYRDHLPVWRPE
Nucleotide Sequence ATGGCAACTTCCACCAGCTCCTGCCAGCTTCCTGGGTCTCTGACCACAGCCCCTCTCGCCTCACCCCTGCTCTACAGGGATCACCTTCCTGTCTGGAGGCCAGAGTGA

CircID chr16:30069616|30070010
ORF Type ORF9
Protein Length 32
Nucleotide Length 96
Protein Sequence MGPDLLLRPSPAGLCPEGLGREEGEPEGCAGG
Nucleotide Sequence CTGGGCCCTGACCTTCTCCTACGGCCGAGCCCTGCAGGCCTCTGCCCTGAAGGCCTGGGGCGGGAAGAAGGAGAACCTGAAGGCTGCGCAGGAGGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites