CircRNA Information

General Information
circRNA Basic Information
CircID chr16:30069868|30070218
Strand +
CircType exon
Host Gene ENSG00000149925.15;
Algorism CIRI2;
Sequence CTCCGCTTAATAGGCGTGGTTAGAGACGAAGAGGGACTCGCTGGCAGCAGCCCCAGCCTGACCGCTCGGAGTGTACTTTCCTTGACAGGCAAGGCTGTTGGCCTAAGCAGGGAGAGGGGTGGAGTGAGAAGGGCTCTTCTCCGAGTCCCATCCACCCAGGCACCCTGCCCACCTCCTGCCTATCCTTACCAGGGCTCGCTTGACATACTCCTCCTGCGCAGCCTTCAGGTTCTCCTTCTTCCCGCCCCAGGCCTTCAGGGCAGAGGCCTGCAGGGCTCGGCCGTAGGAGAAGGTCAGGGCCCAGGGCTTCAGCAGGGGGCACTTGTTAATGGCATTGAGGTTGATGGACGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:30069868|30070218 hsa-miR-370-5p 0 0 1
chr16:30069868|30070218 hsa-miR-370-3p 0 0 1
chr16:30069868|30070218 hsa-miR-484 0 0 1
chr16:30069868|30070218 hsa-miR-589-5p 0 0 1
chr16:30069868|30070218 hsa-miR-589-3p 0 0 1
chr16:30069868|30070218 hsa-miR-604 0 0 1
chr16:30069868|30070218 hsa-miR-661 1 1 1
chr16:30069868|30070218 hsa-miR-765 0 1 1
chr16:30069868|30070218 hsa-miR-874-5p 0 0 1
chr16:30069868|30070218 hsa-miR-874-3p 0 0 1
chr16:30069868|30070218 hsa-miR-541-5p 0 0 1
chr16:30069868|30070218 hsa-miR-541-3p 0 0 1
chr16:30069868|30070218 hsa-miR-940 0 0 1
chr16:30069868|30070218 hsa-miR-1229-5p 0 0 1
chr16:30069868|30070218 hsa-miR-1229-3p 0 0 1
chr16:30069868|30070218 hsa-miR-1202 0 0 1
chr16:30069868|30070218 hsa-miR-1205 0 1 1
chr16:30069868|30070218 hsa-miR-1291 0 1 1
chr16:30069868|30070218 hsa-miR-548k 0 0 1
chr16:30069868|30070218 hsa-miR-1293 0 0 1
chr16:30069868|30070218 hsa-miR-1253 0 0 1
chr16:30069868|30070218 hsa-miR-296-5p 0 0 1
chr16:30069868|30070218 hsa-miR-615-3p 0 1 1
chr16:30069868|30070218 hsa-miR-146b-3p 0 0 1
chr16:30069868|30070218 hsa-miR-654-5p 0 0 1
chr16:30069868|30070218 hsa-miR-1207-5p 1 1 1
chr16:30069868|30070218 hsa-miR-324-3p 0 0 1
chr16:30069868|30070218 hsa-miR-483-3p 0 0 1
chr16:30069868|30070218 hsa-miR-1233 0 0 1
chr16:30069868|30070218 hsa-miR-550 0 0 1
chr16:30069868|30070218 hsa-miR-642 0 0 1
chr16:30069868|30070218 hsa-miR-1254 0 0 1
chr16:30069868|30070218 hsa-miR-129-3p 0 0 1
chr16:30069868|30070218 hsa-miR-1295 0 0 1
chr16:30069868|30070218 hsa-miR-608 1 0 0
chr16:30069868|30070218 hsa-miR-612 1 0 0
chr16:30069868|30070218 hsa-miR-636 1 0 0
chr16:30069868|30070218 hsa-miR-663a 1 1 0
chr16:30069868|30070218 hsa-miR-762 1 1 0
chr16:30069868|30070218 hsa-miR-1286 1 0 0
chr16:30069868|30070218 hsa-miR-2861 1 0 0
chr16:30069868|30070218 hsa-miR-3141 1 0 0
chr16:30069868|30070218 hsa-miR-3147 1 0 0
chr16:30069868|30070218 hsa-miR-3154 0 1 0
chr16:30069868|30070218 hsa-miR-3185 0 1 0
chr16:30069868|30070218 hsa-miR-3196 0 1 0
chr16:30069868|30070218 hsa-miR-4292 0 1 0
chr16:30069868|30070218 hsa-miR-3652 1 0 0
chr16:30069868|30070218 hsa-miR-1268b 1 0 0
chr16:30069868|30070218 hsa-miR-4490 0 1 0
chr16:30069868|30070218 hsa-miR-2392 1 0 0
chr16:30069868|30070218 hsa-miR-4507 1 0 0
chr16:30069868|30070218 hsa-miR-4514 1 0 0
chr16:30069868|30070218 hsa-miR-4516 0 1 0
chr16:30069868|30070218 hsa-miR-4533 1 0 0
chr16:30069868|30070218 hsa-miR-1587 1 0 0
chr16:30069868|30070218 hsa-miR-4651 1 1 0
chr16:30069868|30070218 hsa-miR-4656 1 0 0
chr16:30069868|30070218 hsa-miR-4688 1 0 0
chr16:30069868|30070218 hsa-miR-4706 1 1 0
chr16:30069868|30070218 hsa-miR-4710 1 0 0
chr16:30069868|30070218 hsa-miR-4739 1 1 0
chr16:30069868|30070218 hsa-miR-4741 1 0 0
chr16:30069868|30070218 hsa-miR-5191 0 1 0
chr16:30069868|30070218 hsa-miR-5192 1 1 0
chr16:30069868|30070218 hsa-miR-5704 0 1 0
chr16:30069868|30070218 hsa-miR-5787 1 1 0
chr16:30069868|30070218 hsa-miR-6069 1 0 0
chr16:30069868|30070218 hsa-miR-6126 0 1 0
chr16:30069868|30070218 hsa-miR-6134 0 1 0
chr16:30069868|30070218 hsa-miR-6165 1 0 0
chr16:30069868|30070218 hsa-miR-6844 0 1 0
chr16:30069868|30070218 hsa-miR-6860 1 0 0
chr16:30069868|30070218 hsa-miR-7974 1 0 0
chr16:30069868|30070218 hsa-miR-7976 0 1 0
chr16:30069868|30070218 hsa-miR-8054 0 1 0
chr16:30069868|30070218 hsa-miR-12126 0 1 0
chr16:30069868|30070218 hsa-miR-18a-3p 0 1 0
chr16:30069868|30070218 hsa-miR-6747-5p 1 0 0
chr16:30069868|30070218 hsa-miR-4433a-3p 1 0 0
chr16:30069868|30070218 hsa-miR-6765-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6861-5p 1 1 0
chr16:30069868|30070218 hsa-miR-7106-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6894-5p 1 0 0
chr16:30069868|30070218 hsa-miR-1233-3p 0 1 0
chr16:30069868|30070218 hsa-miR-6892-3p 0 1 0
chr16:30069868|30070218 hsa-miR-6799-5p 1 1 0
chr16:30069868|30070218 hsa-miR-6089 1 0 0
chr16:30069868|30070218 hsa-miR-4722-5p 1 1 0
chr16:30069868|30070218 hsa-miR-7160-5p 1 1 0
chr16:30069868|30070218 hsa-miR-6762-3p 1 1 0
chr16:30069868|30070218 hsa-miR-6806-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6721-5p 1 1 0
chr16:30069868|30070218 hsa-miR-6776-5p 0 1 0
chr16:30069868|30070218 hsa-miR-7845-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6832-3p 0 1 0
chr16:30069868|30070218 hsa-miR-3180-3p 1 0 0
chr16:30069868|30070218 hsa-miR-6748-5p 1 1 0
chr16:30069868|30070218 hsa-miR-877-3p 0 1 0
chr16:30069868|30070218 hsa-miR-185-3p 1 0 0
chr16:30069868|30070218 hsa-miR-6829-5p 0 1 0
chr16:30069868|30070218 hsa-miR-6732-5p 1 1 0
chr16:30069868|30070218 hsa-miR-23a-5p 1 1 0
chr16:30069868|30070218 hsa-miR-6798-5p 1 1 0
chr16:30069868|30070218 hsa-miR-6782-5p 1 0 0
chr16:30069868|30070218 hsa-miR-345-3p 0 1 0
chr16:30069868|30070218 hsa-miR-4436b-5p 1 0 0
chr16:30069868|30070218 hsa-miR-939-3p 0 1 0
chr16:30069868|30070218 hsa-miR-1226-5p 1 1 0
chr16:30069868|30070218 hsa-miR-3944-3p 1 1 0
chr16:30069868|30070218 hsa-miR-6894-3p 1 0 0
chr16:30069868|30070218 hsa-miR-6514-3p 1 0 0
chr16:30069868|30070218 hsa-miR-3691-5p 0 1 0
chr16:30069868|30070218 hsa-miR-5001-3p 1 0 0
chr16:30069868|30070218 hsa-miR-885-3p 1 0 0
chr16:30069868|30070218 hsa-miR-1228-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6771-5p 1 0 0
chr16:30069868|30070218 hsa-miR-3677-3p 1 0 0
chr16:30069868|30070218 hsa-miR-6749-5p 1 0 0
chr16:30069868|30070218 hsa-miR-149-3p 1 0 0
chr16:30069868|30070218 hsa-miR-6830-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6789-5p 1 0 0
chr16:30069868|30070218 hsa-miR-4640-3p 1 0 0
chr16:30069868|30070218 hsa-miR-7843-3p 0 1 0
chr16:30069868|30070218 hsa-miR-6781-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6878-5p 0 1 0
chr16:30069868|30070218 hsa-miR-7112-5p 1 0 0
chr16:30069868|30070218 hsa-let-7e-5p 1 0 0
chr16:30069868|30070218 hsa-miR-4732-3p 0 1 0
chr16:30069868|30070218 hsa-miR-6867-3p 0 1 0
chr16:30069868|30070218 hsa-miR-1295b-3p 1 0 0
chr16:30069868|30070218 hsa-miR-6792-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6886-3p 0 1 0
chr16:30069868|30070218 hsa-miR-5088-3p 0 1 0
chr16:30069868|30070218 hsa-miR-4283 1 0 0
chr16:30069868|30070218 hsa-miR-6802-3p 0 1 0
chr16:30069868|30070218 hsa-miR-3173-5p 0 1 0
chr16:30069868|30070218 hsa-miR-6779-3p 0 1 0
chr16:30069868|30070218 hsa-miR-371b-3p 0 1 0
chr16:30069868|30070218 hsa-miR-4714-5p 0 1 0
chr16:30069868|30070218 hsa-miR-651-3p 0 1 0
chr16:30069868|30070218 hsa-miR-4650-5p 0 1 0
chr16:30069868|30070218 hsa-miR-212-3p 0 1 0
chr16:30069868|30070218 hsa-miR-4763-3p 1 1 0
chr16:30069868|30070218 hsa-miR-6769b-5p 1 1 0
chr16:30069868|30070218 hsa-miR-6787-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6812-5p 1 1 0
chr16:30069868|30070218 hsa-miR-6816-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6865-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6893-5p 1 1 0
chr16:30069868|30070218 hsa-miR-5001-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6737-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6743-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6752-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6756-5p 1 1 0
chr16:30069868|30070218 hsa-miR-6769a-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6803-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6815-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6819-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6851-5p 1 1 0
chr16:30069868|30070218 hsa-miR-7107-5p 1 1 0
chr16:30069868|30070218 hsa-miR-11181-3p 1 1 0
chr16:30069868|30070218 hsa-miR-6722-3p 1 0 0
chr16:30069868|30070218 hsa-miR-6751-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6779-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6808-5p 1 1 0
chr16:30069868|30070218 hsa-miR-6879-5p 1 0 0
chr16:30069868|30070218 hsa-miR-320a-5p 0 1 0
chr16:30069868|30070218 hsa-miR-6754-3p 0 1 0
chr16:30069868|30070218 hsa-miR-3620-5p 1 0 0
chr16:30069868|30070218 hsa-miR-1237-5p 1 0 0
chr16:30069868|30070218 hsa-miR-1909-3p 1 0 0
chr16:30069868|30070218 hsa-miR-328-5p 1 0 0
chr16:30069868|30070218 hsa-miR-3187-5p 1 0 0
chr16:30069868|30070218 hsa-miR-6511a-5p 1 0 0
chr16:30069868|30070218 hsa-miR-10396a-3p 1 0 0
chr16:30069868|30070218 hsa-miR-10396b-3p 1 0 0
chr16:30069868|30070218 hsa-miR-3198 1 0 0
chr16:30069868|30070218 hsa-miR-6799-3p 0 1 0
chr16:30069868|30070218 hsa-miR-6877-3p 0 1 0
chr16:30069868|30070218 hsa-miR-3679-5p 1 1 0
chr16:30069868|30070218 hsa-miR-4646-5p 1 0 0
chr16:30069868|30070218 hsa-miR-4667-5p 1 0 0
chr16:30069868|30070218 hsa-miR-302d-3p 0 1 0
chr16:30069868|30070218 hsa-miR-6791-5p 1 1 0
chr16:30069868|30070218 hsa-miR-550a-5p 1 1 0
chr16:30069868|30070218 hsa-miR-4757-5p 0 1 0
chr16:30069868|30070218 hsa-miR-6810-3p 0 1 0
chr16:30069868|30070218 hsa-miR-6775-3p 1 1 0
chr16:30069868|30070218 hsa-miR-6744-3p 0 1 0
chr16:30069868|30070218 hsa-miR-10394-5p 0 1 0
chr16:30069868|30070218 hsa-miR-515-3p 0 1 0
chr16:30069868|30070218 hsa-miR-6811-5p 0 1 0
chr16:30069868|30070218 hsa-miR-519e-3p 0 1 0
chr16:30069868|30070218 hsa-miR-520e-3p 0 1 0
chr16:30069868|30070218 hsa-miR-520b-3p 0 1 0
chr16:30069868|30070218 hsa-miR-520c-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:30069868|30070218
ORF Type ORF1
Protein Length 98
Nucleotide Length 294
Protein Sequence MTARSVLSLTGKAVGLSRERGGVRRALLRVPSTQAPCPPPAYPYQGSLDILLLRSLQVLLLPAPGLQGRGLQGSAVGEGQGPGLQQGALVNGIEVDGR
Nucleotide Sequence CTGACCGCTCGGAGTGTACTTTCCTTGACAGGCAAGGCTGTTGGCCTAAGCAGGGAGAGGGGTGGAGTGAGAAGGGCTCTTCTCCGAGTCCCATCCACCCAGGCACCCTGCCCACCTCCTGCCTATCCTTACCAGGGCTCGCTTGACATACTCCTCCTGCGCAGCCTTCAGGTTCTCCTTCTTCCCGCCCCAGGCCTTCAGGGCAGAGGCCTGCAGGGCTCGGCCGTAGGAGAAGGTCAGGGCCCAGGGCTTCAGCAGGGGGCACTTGTTAATGGCATTGAGGTTGATGGACGC
CircID chr16:30069868|30070218
ORF Type ORF2
Protein Length 36
Nucleotide Length 111
Protein Sequence MPILTRARLTYSSCAAFRFSFFPPQAFRAEACRARP
Nucleotide Sequence CTGCCTATCCTTACCAGGGCTCGCTTGACATACTCCTCCTGCGCAGCCTTCAGGTTCTCCTTCTTCCCGCCCCAGGCCTTCAGGGCAGAGGCCTGCAGGGCTCGGCCGTAG
CircID chr16:30069868|30070218
ORF Type ORF3
Protein Length 70
Nucleotide Length 213
Protein Sequence MLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALVRIGRRWAGCLGGWDSEKSPSHSTPLPA
Nucleotide Sequence CTGCTGAAGCCCTGGGCCCTGACCTTCTCCTACGGCCGAGCCCTGCAGGCCTCTGCCCTGAAGGCCTGGGGCGGGAAGAAGGAGAACCTGAAGGCTGCGCAGGAGGAGTATGTCAAGCGAGCCCTGGTAAGGATAGGCAGGAGGTGGGCAGGGTGCCTGGGTGGATGGGACTCGGAGAAGAGCCCTTCTCACTCCACCCCTCTCCCTGCTTAG
CircID chr16:30069868|30070218
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MLRPTALPVKESTLRAVRLGLLPASPSSSLTTPIKR
Nucleotide Sequence CTGCTTAGGCCAACAGCCTTGCCTGTCAAGGAAAGTACACTCCGAGCGGTCAGGCTGGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGCCTATTAAGCGG
CircID chr16:30069868|30070218
ORF Type ORF5
Protein Length 94
Nucleotide Length 285
Protein Sequence MGPDLLLRPSPAGLCPEGLGREEGEPEGCAGGVCQASPGKDRQEVGRVPGWMGLGEEPFSLHPSPCLGQQPCLSRKVHSERSGWGCCQRVPLRL
Nucleotide Sequence CTGGGCCCTGACCTTCTCCTACGGCCGAGCCCTGCAGGCCTCTGCCCTGAAGGCCTGGGGCGGGAAGAAGGAGAACCTGAAGGCTGCGCAGGAGGAGTATGTCAAGCGAGCCCTGGTAAGGATAGGCAGGAGGTGGGCAGGGTGCCTGGGTGGATGGGACTCGGAGAAGAGCCCTTCTCACTCCACCCCTCTCCCTGCTTAGGCCAACAGCCTTGCCTGTCAAGGAAAGTACACTCCGAGCGGTCAGGCTGGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab