CircRNA Information

General Information
circRNA Basic Information
CircID chr16:30070201|30070324
Strand -
CircType exon
Host Gene ENSG00000149925.15;
Algorism CIRI2;
Sequence CACGCCTATTAAGCGGAGGTGTTCCCAGGCTGCCCCCAACACTCCAGGCCCTGCCCCCTCCCACTCTTGAAGAGGAGGCCGCCTCCTCGGGGCTCCAGGCTGGCTTGCCCGCGCTCTTTCTTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:30070201|30070324 hsa-miR-122-5p 0 0 1
chr16:30070201|30070324 hsa-miR-122-3p 0 0 1
chr16:30070201|30070324 hsa-miR-335-5p 0 0 1
chr16:30070201|30070324 hsa-miR-335-3p 0 0 1
chr16:30070201|30070324 hsa-miR-633 0 0 1
chr16:30070201|30070324 hsa-miR-661 1 1 1
chr16:30070201|30070324 hsa-miR-1275 0 0 1
chr16:30070201|30070324 hsa-miR-1276 0 0 1
chr16:30070201|30070324 hsa-miR-1292-5p 0 0 1
chr16:30070201|30070324 hsa-miR-1292-3p 0 0 1
chr16:30070201|30070324 hsa-miR-1225-3p 0 0 1
chr16:30070201|30070324 hsa-miR-486-3p 0 1 1
chr16:30070201|30070324 hsa-miR-1207-5p 1 0 1
chr16:30070201|30070324 hsa-miR-151-5p 0 0 1
chr16:30070201|30070324 hsa-miR-1254 0 0 1
chr16:30070201|30070324 hsa-miR-608 1 1 0
chr16:30070201|30070324 hsa-miR-637 1 0 0
chr16:30070201|30070324 hsa-miR-663a 1 0 0
chr16:30070201|30070324 hsa-miR-762 1 0 0
chr16:30070201|30070324 hsa-miR-1268a 1 0 0
chr16:30070201|30070324 hsa-miR-2861 1 1 0
chr16:30070201|30070324 hsa-miR-3147 1 0 0
chr16:30070201|30070324 hsa-miR-3196 1 0 0
chr16:30070201|30070324 hsa-miR-4254 0 1 0
chr16:30070201|30070324 hsa-miR-1268b 1 0 0
chr16:30070201|30070324 hsa-miR-4488 1 1 0
chr16:30070201|30070324 hsa-miR-4651 1 0 0
chr16:30070201|30070324 hsa-miR-4654 1 0 0
chr16:30070201|30070324 hsa-miR-4688 1 0 0
chr16:30070201|30070324 hsa-miR-5090 1 0 0
chr16:30070201|30070324 hsa-miR-5194 1 0 0
chr16:30070201|30070324 hsa-miR-5572 1 0 0
chr16:30070201|30070324 hsa-miR-6085 1 0 0
chr16:30070201|30070324 hsa-miR-6132 0 1 0
chr16:30070201|30070324 hsa-miR-6133 1 0 0
chr16:30070201|30070324 hsa-miR-7150 1 0 0
chr16:30070201|30070324 hsa-miR-12120 1 0 0
chr16:30070201|30070324 hsa-miR-4433b-3p 1 1 0
chr16:30070201|30070324 hsa-miR-4433a-3p 1 1 0
chr16:30070201|30070324 hsa-miR-7106-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6799-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6890-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6727-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6721-5p 0 1 0
chr16:30070201|30070324 hsa-miR-197-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6849-3p 1 1 0
chr16:30070201|30070324 hsa-miR-3180-3p 1 0 0
chr16:30070201|30070324 hsa-miR-6748-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6732-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6805-5p 1 1 0
chr16:30070201|30070324 hsa-miR-6852-5p 0 1 0
chr16:30070201|30070324 hsa-miR-7109-5p 1 0 0
chr16:30070201|30070324 hsa-miR-1226-5p 1 0 0
chr16:30070201|30070324 hsa-miR-1909-5p 1 0 0
chr16:30070201|30070324 hsa-miR-1229-5p 1 0 0
chr16:30070201|30070324 hsa-miR-4640-5p 1 0 0
chr16:30070201|30070324 hsa-miR-1228-5p 1 0 0
chr16:30070201|30070324 hsa-miR-92b-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6749-5p 1 1 0
chr16:30070201|30070324 hsa-miR-149-3p 1 1 0
chr16:30070201|30070324 hsa-miR-7112-5p 1 0 0
chr16:30070201|30070324 hsa-miR-875-5p 0 1 0
chr16:30070201|30070324 hsa-miR-2277-5p 1 1 0
chr16:30070201|30070324 hsa-miR-10400-5p 1 0 0
chr16:30070201|30070324 hsa-miR-1233-5p 1 1 0
chr16:30070201|30070324 hsa-miR-1273h-5p 1 0 0
chr16:30070201|30070324 hsa-miR-4763-3p 1 1 0
chr16:30070201|30070324 hsa-miR-6769b-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6778-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6787-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6812-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6816-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6775-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6737-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6743-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6752-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6756-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6803-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6819-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6851-5p 1 0 0
chr16:30070201|30070324 hsa-miR-7107-5p 1 1 0
chr16:30070201|30070324 hsa-miR-10401-5p 1 0 0
chr16:30070201|30070324 hsa-miR-1249-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6751-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6779-5p 1 1 0
chr16:30070201|30070324 hsa-miR-6780a-5p 1 1 0
chr16:30070201|30070324 hsa-miR-6797-5p 1 0 0
chr16:30070201|30070324 hsa-miR-7111-5p 1 0 0
chr16:30070201|30070324 hsa-miR-4728-5p 1 1 0
chr16:30070201|30070324 hsa-miR-5196-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6836-5p 1 1 0
chr16:30070201|30070324 hsa-miR-10396b-5p 1 0 0
chr16:30070201|30070324 hsa-miR-1237-5p 1 1 0
chr16:30070201|30070324 hsa-miR-328-5p 1 0 0
chr16:30070201|30070324 hsa-miR-4632-5p 1 0 0
chr16:30070201|30070324 hsa-miR-4685-5p 0 1 0
chr16:30070201|30070324 hsa-miR-4745-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6729-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6738-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6794-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6795-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6846-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6848-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6858-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6883-5p 1 1 0
chr16:30070201|30070324 hsa-miR-6887-5p 1 0 0
chr16:30070201|30070324 hsa-miR-4697-5p 1 0 0
chr16:30070201|30070324 hsa-miR-6831-5p 1 0 0
chr16:30070201|30070324 hsa-miR-1238-5p 1 0 0
chr16:30070201|30070324 hsa-miR-4758-5p 1 1 0
chr16:30070201|30070324 hsa-miR-3198 0 1 0
chr16:30070201|30070324 hsa-miR-1914-3p 1 0 0
chr16:30070201|30070324 hsa-miR-3116 0 1 0
chr16:30070201|30070324 hsa-miR-6785-5p 1 1 0
chr16:30070201|30070324 hsa-miR-6791-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:30070201|30070324
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MPPTLQALPPPTLEEEAASSGLQAGLPALFL
Nucleotide Sequence CTGCCCCCAACACTCCAGGCCCTGCCCCCTCCCACTCTTGAAGAGGAGGCCGCCTCCTCGGGGCTCCAGGCTGGCTTGCCCGCGCTCTTTCTT
CircID chr16:30070201|30070324
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MEPRGGGLLFKSGRGQGLECWGQPGNTSA
Nucleotide Sequence CTGGAGCCCCGAGGAGGCGGCCTCCTCTTCAAGAGTGGGAGGGGGCAGGGCCTGGAGTGTTGGGGGCAGCCTGGGAACACCTCCGCTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab