CircRNA Information

General Information
circRNA Basic Information
CircID chr16:30116646|30116951
Strand +
CircType exon
Host Gene ENSG00000102882.10;
Algorism CIRI2;
Sequence AGTGGAGGAAGCGCTGGCTCACCCCTACCTGGAGCAGTACTATGACCCGACGGATGAGGTGGGCCAGTCCCCAGCAGCAGTGGGGCTGGGGGCAGGGGAGCAGGGGGGCACGTAGGCATCCCCCATGCCAGGCCTGAGCCTTGCTGTCTCTACCACCCCAGCCAGTGGCCGAGGAGCCCTTCACCTTCGCCATGGAGCTGGATGACCTACCTAAGGAGCGGCTGAAGGAGCTCATCTTCCAGGAGACAGCACGCTTCCAGCCCGGAGTGCTGGAGGCCCCCTAGCCCAGACAGACATCTCTGCACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:30116646|30116951 hsa-miR-205-5p 0 0 1
chr16:30116646|30116951 hsa-miR-205-3p 0 0 1
chr16:30116646|30116951 hsa-miR-379-5p 0 0 1
chr16:30116646|30116951 hsa-miR-379-3p 0 0 1
chr16:30116646|30116951 hsa-miR-196b-5p 0 0 1
chr16:30116646|30116951 hsa-miR-196b-3p 0 0 1
chr16:30116646|30116951 hsa-miR-193b-5p 0 0 1
chr16:30116646|30116951 hsa-miR-193b-3p 0 0 1
chr16:30116646|30116951 hsa-miR-608 1 1 1
chr16:30116646|30116951 hsa-miR-612 1 0 1
chr16:30116646|30116951 hsa-miR-625-5p 0 0 1
chr16:30116646|30116951 hsa-miR-625-3p 0 0 1
chr16:30116646|30116951 hsa-miR-626 0 0 1
chr16:30116646|30116951 hsa-miR-766-5p 0 0 1
chr16:30116646|30116951 hsa-miR-766-3p 0 0 1
chr16:30116646|30116951 hsa-miR-892b 0 0 1
chr16:30116646|30116951 hsa-miR-1231 0 1 1
chr16:30116646|30116951 hsa-miR-1293 0 0 1
chr16:30116646|30116951 hsa-miR-1275 0 0 1
chr16:30116646|30116951 hsa-miR-1278 0 0 1
chr16:30116646|30116951 hsa-miR-671-5p 0 0 1
chr16:30116646|30116951 hsa-miR-331-5p 0 0 1
chr16:30116646|30116951 hsa-miR-361-3p 0 1 1
chr16:30116646|30116951 hsa-miR-1224-3p 0 1 1
chr16:30116646|30116951 hsa-miR-331-3p 0 0 1
chr16:30116646|30116951 hsa-miR-654-3p 0 0 1
chr16:30116646|30116951 hsa-miR-556-5p 0 1 1
chr16:30116646|30116951 hsa-miR-338-3p 0 0 1
chr16:30116646|30116951 hsa-miR-324-3p 1 1 1
chr16:30116646|30116951 hsa-miR-342-5p 0 0 1
chr16:30116646|30116951 hsa-miR-193a-3p 0 1 1
chr16:30116646|30116951 hsa-miR-516a-3p 0 0 1
chr16:30116646|30116951 hsa-miR-7 0 0 1
chr16:30116646|30116951 hsa-miR-1285 0 0 1
chr16:30116646|30116951 hsa-miR-24 0 0 1
chr16:30116646|30116951 hsa-miR-196a 0 0 1
chr16:30116646|30116951 hsa-miR-637 0 1 0
chr16:30116646|30116951 hsa-miR-762 1 1 0
chr16:30116646|30116951 hsa-miR-1913 1 1 0
chr16:30116646|30116951 hsa-miR-2861 1 0 0
chr16:30116646|30116951 hsa-miR-3132 0 1 0
chr16:30116646|30116951 hsa-miR-4323 0 1 0
chr16:30116646|30116951 hsa-miR-4259 1 0 0
chr16:30116646|30116951 hsa-miR-4267 0 1 0
chr16:30116646|30116951 hsa-miR-4268 0 1 0
chr16:30116646|30116951 hsa-miR-4286 0 1 0
chr16:30116646|30116951 hsa-miR-3652 1 1 0
chr16:30116646|30116951 hsa-miR-3943 0 1 0
chr16:30116646|30116951 hsa-miR-1268b 1 0 0
chr16:30116646|30116951 hsa-miR-4421 0 1 0
chr16:30116646|30116951 hsa-miR-378g 0 1 0
chr16:30116646|30116951 hsa-miR-4430 0 1 0
chr16:30116646|30116951 hsa-miR-4448 0 1 0
chr16:30116646|30116951 hsa-miR-4492 0 1 0
chr16:30116646|30116951 hsa-miR-4498 1 0 0
chr16:30116646|30116951 hsa-miR-4505 0 1 0
chr16:30116646|30116951 hsa-miR-4515 0 1 0
chr16:30116646|30116951 hsa-miR-4525 0 1 0
chr16:30116646|30116951 hsa-miR-1587 1 0 0
chr16:30116646|30116951 hsa-miR-4651 1 1 0
chr16:30116646|30116951 hsa-miR-4721 1 0 0
chr16:30116646|30116951 hsa-miR-5787 0 1 0
chr16:30116646|30116951 hsa-miR-6069 0 1 0
chr16:30116646|30116951 hsa-miR-8073 0 1 0
chr16:30116646|30116951 hsa-miR-8089 0 1 0
chr16:30116646|30116951 hsa-miR-4731-5p 0 1 0
chr16:30116646|30116951 hsa-miR-4665-3p 1 0 0
chr16:30116646|30116951 hsa-miR-125b-1-3p 1 0 0
chr16:30116646|30116951 hsa-miR-6861-5p 1 0 0
chr16:30116646|30116951 hsa-miR-3692-5p 0 1 0
chr16:30116646|30116951 hsa-miR-1225-3p 1 0 0
chr16:30116646|30116951 hsa-miR-6807-5p 0 1 0
chr16:30116646|30116951 hsa-miR-3064-5p 0 1 0
chr16:30116646|30116951 hsa-miR-3622b-5p 0 1 0
chr16:30116646|30116951 hsa-miR-197-5p 1 0 0
chr16:30116646|30116951 hsa-miR-3189-5p 1 0 0
chr16:30116646|30116951 hsa-miR-7845-5p 0 1 0
chr16:30116646|30116951 hsa-miR-6845-3p 0 1 0
chr16:30116646|30116951 hsa-miR-6796-5p 1 0 0
chr16:30116646|30116951 hsa-miR-185-3p 0 1 0
chr16:30116646|30116951 hsa-miR-2467-3p 1 0 0
chr16:30116646|30116951 hsa-miR-6782-5p 0 1 0
chr16:30116646|30116951 hsa-miR-6728-3p 0 1 0
chr16:30116646|30116951 hsa-miR-6774-3p 0 1 0
chr16:30116646|30116951 hsa-miR-6735-3p 1 0 0
chr16:30116646|30116951 hsa-miR-6858-3p 0 1 0
chr16:30116646|30116951 hsa-miR-5088-5p 0 1 0
chr16:30116646|30116951 hsa-miR-4793-5p 1 0 0
chr16:30116646|30116951 hsa-miR-4763-5p 1 1 0
chr16:30116646|30116951 hsa-miR-4707-3p 1 0 0
chr16:30116646|30116951 hsa-miR-3944-3p 1 1 0
chr16:30116646|30116951 hsa-miR-1908-3p 1 0 0
chr16:30116646|30116951 hsa-miR-4640-5p 1 0 0
chr16:30116646|30116951 hsa-miR-6823-5p 1 0 0
chr16:30116646|30116951 hsa-miR-6749-5p 1 1 0
chr16:30116646|30116951 hsa-miR-4640-3p 0 1 0
chr16:30116646|30116951 hsa-miR-4652-5p 0 1 0
chr16:30116646|30116951 hsa-miR-6828-3p 0 1 0
chr16:30116646|30116951 hsa-miR-4758-3p 0 1 0
chr16:30116646|30116951 hsa-miR-6832-5p 0 1 0
chr16:30116646|30116951 hsa-miR-6752-3p 0 1 0
chr16:30116646|30116951 hsa-miR-3670 1 0 0
chr16:30116646|30116951 hsa-miR-4645-3p 0 1 0
chr16:30116646|30116951 hsa-miR-431-3p 1 0 0
chr16:30116646|30116951 hsa-miR-4738-5p 0 1 0
chr16:30116646|30116951 hsa-miR-1207-5p 1 0 0
chr16:30116646|30116951 hsa-miR-4763-3p 1 0 0
chr16:30116646|30116951 hsa-miR-6812-5p 1 1 0
chr16:30116646|30116951 hsa-miR-6775-5p 1 0 0
chr16:30116646|30116951 hsa-miR-5001-5p 1 1 0
chr16:30116646|30116951 hsa-miR-6737-5p 0 1 0
chr16:30116646|30116951 hsa-miR-6756-5p 1 0 0
chr16:30116646|30116951 hsa-miR-6819-5p 0 1 0
chr16:30116646|30116951 hsa-miR-3620-5p 1 1 0
chr16:30116646|30116951 hsa-miR-4649-5p 1 0 0
chr16:30116646|30116951 hsa-miR-6729-5p 1 0 0
chr16:30116646|30116951 hsa-miR-6831-5p 1 0 0
chr16:30116646|30116951 hsa-miR-4665-5p 0 1 0
chr16:30116646|30116951 hsa-miR-6801-3p 0 1 0
chr16:30116646|30116951 hsa-miR-6805-3p 1 0 0
chr16:30116646|30116951 hsa-miR-6810-3p 1 1 0
chr16:30116646|30116951 hsa-miR-10400-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:30116646|30116951
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MAHPYLEQYYDPTDEVGQSPAAVGLGAGEQGGT
Nucleotide Sequence CTGGCTCACCCCTACCTGGAGCAGTACTATGACCCGACGGATGAGGTGGGCCAGTCCCCAGCAGCAGTGGGGCTGGGGGCAGGGGAGCAGGGGGGCACGTAG
CircID chr16:30116646|30116951
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MPGLSLAVSTTPASGRGALHLRHGAG
Nucleotide Sequence ATGCCAGGCCTGAGCCTTGCTGTCTCTACCACCCCAGCCAGTGGCCGAGGAGCCCTTCACCTTCGCCATGGAGCTGGATGA
CircID chr16:30116646|30116951
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MTRRMRWASPQQQWGWGQGSRGARRHPPCQA
Nucleotide Sequence ATGACCCGACGGATGAGGTGGGCCAGTCCCCAGCAGCAGTGGGGCTGGGGGCAGGGGAGCAGGGGGGCACGTAGGCATCCCCCATGCCAGGCCTGA
CircID chr16:30116646|30116951
ORF Type ORF4
Protein Length 47
Nucleotide Length 144
Protein Sequence MLSLPPQPVAEEPFTFAMELDDLPKERLKELIFQETARFQPGVLEAP
Nucleotide Sequence TTGCTGTCTCTACCACCCCAGCCAGTGGCCGAGGAGCCCTTCACCTTCGCCATGGAGCTGGATGACCTACCTAAGGAGCGGCTGAAGGAGCTCATCTTCCAGGAGACAGCACGCTTCCAGCCCGGAGTGCTGGAGGCCCCCTAG
CircID chr16:30116646|30116951
ORF Type ORF5
Protein Length 41
Nucleotide Length 126
Protein Sequence MAGVVETARLRPGMGDAYVPPCSPAPSPTAAGDWPTSSVGS
Nucleotide Sequence CTGGCTGGGGTGGTAGAGACAGCAAGGCTCAGGCCTGGCATGGGGGATGCCTACGTGCCCCCCTGCTCCCCTGCCCCCAGCCCCACTGCTGCTGGGGACTGGCCCACCTCATCCGTCGGGTCATAG
CircID chr16:30116646|30116951
ORF Type ORF6
Protein Length 28
Nucleotide Length 87
Protein Sequence MSGLGGLQHSGLEACCLLEDELLQPLLR
Nucleotide Sequence CTGTCTGGGCTAGGGGGCCTCCAGCACTCCGGGCTGGAAGCGTGCTGTCTCCTGGAAGATGAGCTCCTTCAGCCGCTCCTTAGGTAG
CircID chr16:30116646|30116951
ORF Type ORF7
Protein Length 43
Nucleotide Length 129
Protein Sequence MAWGMPTCPPAPLPPAPLLLGTGPPHPSGHSTAPGRGEPALPP
Nucleotide Sequence CTGGCATGGGGGATGCCTACGTGCCCCCCTGCTCCCCTGCCCCCAGCCCCACTGCTGCTGGGGACTGGCCCACCTCATCCGTCGGGTCATAGTACTGCTCCAGGTAGGGGTGAGCCAGCGCTTCCTCCA
CircID chr16:30116646|30116951
ORF Type ORF8
Protein Length 78
Nucleotide Length 234
Protein Sequence MSSFSRSLGRSSSSMAKVKGSSATGWGGRDSKAQAWHGGCLRAPLLPCPQPHCCWGLAHLIRRVIVLLQVGVSQRFLH
Nucleotide Sequence ATGAGCTCCTTCAGCCGCTCCTTAGGTAGGTCATCCAGCTCCATGGCGAAGGTGAAGGGCTCCTCGGCCACTGGCTGGGGTGGTAGAGACAGCAAGGCTCAGGCCTGGCATGGGGGATGCCTACGTGCCCCCCTGCTCCCCTGCCCCCAGCCCCACTGCTGCTGGGGACTGGCCCACCTCATCCGTCGGGTCATAGTACTGCTCCAGGTAGGGGTGAGCCAGCGCTTCCTCCAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab