CircRNA Information

General Information
circRNA Basic Information
CircID chr16:30187948|30188241
Strand -
CircType exon
Host Gene ENSG00000102879.14;
Algorism CIRI2;
Sequence AGCTCAATCCGGTACTTTGAGATCACTTCCGAGGCCCCTTTCCTGCACTATCTCTCCATGTTCAGTTCCAAGGAGTCCCAGCGGGGCATGGGCTACATGCCCAAACGTGGCCTGGAGGTGAACAAGTGTGAGATCGCCAGGTGACTGACCCCCGGCCCTGACCGCAGCATGCTCCTTGGGCAGTGGGCAGTCCCAAGCCCACCCAACCAGACTGTGGGCCCCGCTCACCTTCCCCTTCCCACAGGTTCTACAAGCTGCACGAGCGGAGGTGTGAGCCCATTGCCATGACAGTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:30187948|30188241 hsa-miR-130a-5p 0 0 1
chr16:30187948|30188241 hsa-miR-130a-3p 0 0 1
chr16:30187948|30188241 hsa-miR-185-5p 0 0 1
chr16:30187948|30188241 hsa-miR-185-3p 0 0 1
chr16:30187948|30188241 hsa-miR-301a-5p 0 0 1
chr16:30187948|30188241 hsa-miR-301a-3p 0 0 1
chr16:30187948|30188241 hsa-miR-130b-5p 0 0 1
chr16:30187948|30188241 hsa-miR-130b-3p 0 0 1
chr16:30187948|30188241 hsa-miR-517-5p 0 0 1
chr16:30187948|30188241 hsa-miR-517a-3p 0 0 1
chr16:30187948|30188241 hsa-miR-517b-3p 0 0 1
chr16:30187948|30188241 hsa-miR-520g-5p 0 0 1
chr16:30187948|30188241 hsa-miR-520g-3p 0 0 1
chr16:30187948|30188241 hsa-miR-517c-3p 0 0 1
chr16:30187948|30188241 hsa-miR-520h 0 0 1
chr16:30187948|30188241 hsa-miR-572 0 0 1
chr16:30187948|30188241 hsa-miR-622 0 0 1
chr16:30187948|30188241 hsa-miR-649 0 0 1
chr16:30187948|30188241 hsa-miR-1301-5p 0 0 1
chr16:30187948|30188241 hsa-miR-1301-3p 0 0 1
chr16:30187948|30188241 hsa-miR-454-5p 0 0 1
chr16:30187948|30188241 hsa-miR-454-3p 0 0 1
chr16:30187948|30188241 hsa-miR-541-5p 0 0 1
chr16:30187948|30188241 hsa-miR-541-3p 0 0 1
chr16:30187948|30188241 hsa-miR-744-5p 0 0 1
chr16:30187948|30188241 hsa-miR-744-3p 0 0 1
chr16:30187948|30188241 hsa-miR-301b-5p 0 0 1
chr16:30187948|30188241 hsa-miR-301b-3p 0 0 1
chr16:30187948|30188241 hsa-miR-1228-5p 0 0 1
chr16:30187948|30188241 hsa-miR-1228-3p 0 0 1
chr16:30187948|30188241 hsa-miR-1286 0 0 1
chr16:30187948|30188241 hsa-miR-548k 0 0 1
chr16:30187948|30188241 hsa-miR-1293 0 0 1
chr16:30187948|30188241 hsa-miR-1262 0 0 1
chr16:30187948|30188241 hsa-miR-1288-5p 0 0 1
chr16:30187948|30188241 hsa-miR-1288-3p 0 0 1
chr16:30187948|30188241 hsa-miR-654-5p 0 0 1
chr16:30187948|30188241 hsa-miR-1302 0 0 1
chr16:30187948|30188241 hsa-miR-342-3p 0 0 1
chr16:30187948|30188241 hsa-miR-371-5p 0 0 1
chr16:30187948|30188241 hsa-miR-220a 0 0 1
chr16:30187948|30188241 hsa-miR-1245 0 0 1
chr16:30187948|30188241 hsa-miR-663a 1 0 0
chr16:30187948|30188241 hsa-miR-4448 1 0 0
chr16:30187948|30188241 hsa-miR-4462 1 0 0
chr16:30187948|30188241 hsa-miR-4538 1 0 0
chr16:30187948|30188241 hsa-miR-4660 1 0 0
chr16:30187948|30188241 hsa-miR-4706 1 0 0
chr16:30187948|30188241 hsa-miR-4739 1 0 0
chr16:30187948|30188241 hsa-miR-6088 1 0 0
chr16:30187948|30188241 hsa-miR-128-1-5p 1 0 0
chr16:30187948|30188241 hsa-miR-7114-5p 1 0 0
chr16:30187948|30188241 hsa-miR-4722-5p 1 0 0
chr16:30187948|30188241 hsa-miR-6759-5p 1 0 0
chr16:30187948|30188241 hsa-miR-6796-5p 1 0 0
chr16:30187948|30188241 hsa-miR-6850-5p 1 0 0
chr16:30187948|30188241 hsa-miR-1229-5p 1 0 0
chr16:30187948|30188241 hsa-miR-4732-5p 1 0 0
chr16:30187948|30188241 hsa-miR-7156-3p 1 0 0
chr16:30187948|30188241 hsa-miR-3189-3p 1 0 0
chr16:30187948|30188241 hsa-miR-4724-5p 1 0 0
chr16:30187948|30188241 hsa-miR-1914-5p 1 0 0
chr16:30187948|30188241 hsa-miR-4763-3p 1 0 0
chr16:30187948|30188241 hsa-miR-6775-5p 1 0 0
chr16:30187948|30188241 hsa-miR-1343-5p 1 0 0
chr16:30187948|30188241 hsa-miR-6756-5p 1 0 0
chr16:30187948|30188241 hsa-miR-6851-5p 1 0 0
chr16:30187948|30188241 hsa-miR-10401-5p 1 0 0
chr16:30187948|30188241 hsa-miR-1249-5p 1 0 0
chr16:30187948|30188241 hsa-miR-6779-5p 1 0 0
chr16:30187948|30188241 hsa-miR-6797-5p 1 0 0
chr16:30187948|30188241 hsa-miR-4728-5p 1 0 0
chr16:30187948|30188241 hsa-miR-5196-5p 1 0 0
chr16:30187948|30188241 hsa-miR-4745-5p 1 0 0
chr16:30187948|30188241 hsa-miR-1238-5p 1 0 0
chr16:30187948|30188241 hsa-miR-4758-5p 1 0 0
chr16:30187948|30188241 hsa-miR-4769-5p 1 0 0
chr16:30187948|30188241 hsa-miR-365a-5p 1 0 0
chr16:30187948|30188241 hsa-miR-324-3p 1 0 0
chr16:30187948|30188241 hsa-miR-3184-5p 1 0 0
chr16:30187948|30188241 hsa-miR-4691-5p 1 0 0
chr16:30187948|30188241 hsa-miR-128-2-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:30187948|30188241
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MHYLSMFSSKESQRGMGYMPKRGLEVNKCEIAR
Nucleotide Sequence CTGCACTATCTCTCCATGTTCAGTTCCAAGGAGTCCCAGCGGGGCATGGGCTACATGCCCAAACGTGGCCTGGAGGTGAACAAGTGTGAGATCGCCAGGTGA
CircID chr16:30187948|30188241
ORF Type ORF2
Protein Length 47
Nucleotide Length 144
Protein Sequence MTPGPDRSMLLGQWAVPSPPNQTVGPAHLPLPTGSTSCTSGGVSPLP
Nucleotide Sequence CTGACCCCCGGCCCTGACCGCAGCATGCTCCTTGGGCAGTGGGCAGTCCCAAGCCCACCCAACCAGACTGTGGGCCCCGCTCACCTTCCCCTTCCCACAGGTTCTACAAGCTGCACGAGCGGAGGTGTGAGCCCATTGCCATGA
CircID chr16:30187948|30188241
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MRSLPRPLSCTISPCSVPRSPSGAWATCPNVAWR
Nucleotide Sequence TTGAGATCACTTCCGAGGCCCCTTTCCTGCACTATCTCTCCATGTTCAGTTCCAAGGAGTCCCAGCGGGGCATGGGCTACATGCCCAAACGTGGCCTGGAGGTGA
CircID chr16:30187948|30188241
ORF Type ORF4
Protein Length 38
Nucleotide Length 117
Protein Sequence MTAACSLGSGQSQAHPTRLWAPLTFPFPQVLQAARAEV
Nucleotide Sequence CTGACCGCAGCATGCTCCTTGGGCAGTGGGCAGTCCCAAGCCCACCCAACCAGACTGTGGGCCCCGCTCACCTTCCCCTTCCCACAGGTTCTACAAGCTGCACGAGCGGAGGTGTGA
CircID chr16:30187948|30188241
ORF Type ORF5
Protein Length 95
Nucleotide Length 288
Protein Sequence MSWQWAHTSARAACRTCGKGKVSGAHSLVGWAWDCPLPKEHAAVRAGGQSPGDLTLVHLQATFGHVAHAPLGLLGTEHGEIVQERGLGSDLKVPD
Nucleotide Sequence CTGTCATGGCAATGGGCTCACACCTCCGCTCGTGCAGCTTGTAGAACCTGTGGGAAGGGGAAGGTGAGCGGGGCCCACAGTCTGGTTGGGTGGGCTTGGGACTGCCCACTGCCCAAGGAGCATGCTGCGGTCAGGGCCGGGGGTCAGTCACCTGGCGATCTCACACTTGTTCACCTCCAGGCCACGTTTGGGCATGTAGCCCATGCCCCGCTGGGACTCCTTGGAACTGAACATGGAGAGATAGTGCAGGAAAGGGGCCTCGGAAGTGATCTCAAAGTACCGGATTGA
CircID chr16:30187948|30188241
ORF Type ORF6
Protein Length 37
Nucleotide Length 114
Protein Sequence MGGLGTAHCPRSMLRSGPGVSHLAISHLFTSRPRLGM
Nucleotide Sequence TTGGGTGGGCTTGGGACTGCCCACTGCCCAAGGAGCATGCTGCGGTCAGGGCCGGGGGTCAGTCACCTGGCGATCTCACACTTGTTCACCTCCAGGCCACGTTTGGGCATGTAG
CircID chr16:30187948|30188241
ORF Type ORF7
Protein Length 60
Nucleotide Length 183
Protein Sequence MWEGEGERGPQSGWVGLGLPTAQGACCGQGRGSVTWRSHTCSPPGHVWACSPCPAGTPWN
Nucleotide Sequence CTGTGGGAAGGGGAAGGTGAGCGGGGCCCACAGTCTGGTTGGGTGGGCTTGGGACTGCCCACTGCCCAAGGAGCATGCTGCGGTCAGGGCCGGGGGTCAGTCACCTGGCGATCTCACACTTGTTCACCTCCAGGCCACGTTTGGGCATGTAGCCCATGCCCCGCTGGGACTCCTTGGAACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab