CircRNA Information

General Information
circRNA Basic Information
CircID chr16:3030523|3030783
Strand -
CircType exon
Host Gene ENSG00000162069.13;
Algorism CIRI2;
Sequence CCTTCTCCACCTCCTCACGCAGGCCTCGGATCTGGGCCTCCAGGTCCTGCCGGCGGCTCTGCAGCATCTGGTTCTGGGGAAAGGCCTGAGAGCTGGGGACAGGGGCAGCCCCTCCCAGCCCTCAGCCCGGCTTTTTTGGCTCAGATAATCCCCCAGCCCCAGCTGACACTCACTTCCCCCTGCAGACTCTCCAGCCGCGTCCTCAGCTCTGCTCCAGCCAGTGCCTGAGCCTGGCACTGTCCCCGAAGGGCGTCCAGTTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:3030523|3030783 hsa-miR-185-5p 0 0 1
chr16:3030523|3030783 hsa-miR-185-3p 0 0 1
chr16:3030523|3030783 hsa-miR-484 0 1 1
chr16:3030523|3030783 hsa-miR-492 0 1 1
chr16:3030523|3030783 hsa-miR-619-5p 0 0 1
chr16:3030523|3030783 hsa-miR-619-3p 0 0 1
chr16:3030523|3030783 hsa-miR-625-5p 0 0 1
chr16:3030523|3030783 hsa-miR-625-3p 0 0 1
chr16:3030523|3030783 hsa-miR-631 0 1 1
chr16:3030523|3030783 hsa-miR-637 1 1 1
chr16:3030523|3030783 hsa-miR-650 0 0 1
chr16:3030523|3030783 hsa-miR-892b 0 0 1
chr16:3030523|3030783 hsa-miR-1205 0 0 1
chr16:3030523|3030783 hsa-miR-1286 0 1 1
chr16:3030523|3030783 hsa-miR-1249-5p 0 0 1
chr16:3030523|3030783 hsa-miR-1249-3p 0 0 1
chr16:3030523|3030783 hsa-miR-1266-5p 0 0 1
chr16:3030523|3030783 hsa-miR-1266-3p 0 0 1
chr16:3030523|3030783 hsa-miR-1275 0 0 1
chr16:3030523|3030783 hsa-miR-1224-5p 1 1 1
chr16:3030523|3030783 hsa-miR-542-5p 0 0 1
chr16:3030523|3030783 hsa-miR-339-5p 0 1 1
chr16:3030523|3030783 hsa-miR-1184 0 0 1
chr16:3030523|3030783 hsa-miR-574-5p 0 0 1
chr16:3030523|3030783 hsa-miR-423-5p 0 0 1
chr16:3030523|3030783 hsa-miR-1207-3p 0 0 1
chr16:3030523|3030783 hsa-miR-324-3p 0 0 1
chr16:3030523|3030783 hsa-miR-24 0 0 1
chr16:3030523|3030783 hsa-miR-622 1 0 0
chr16:3030523|3030783 hsa-miR-663a 1 0 0
chr16:3030523|3030783 hsa-miR-658 1 0 0
chr16:3030523|3030783 hsa-miR-762 1 1 0
chr16:3030523|3030783 hsa-miR-760 1 0 0
chr16:3030523|3030783 hsa-miR-1182 1 1 0
chr16:3030523|3030783 hsa-miR-1183 1 0 0
chr16:3030523|3030783 hsa-miR-1202 1 0 0
chr16:3030523|3030783 hsa-miR-1913 0 1 0
chr16:3030523|3030783 hsa-miR-3142 0 1 0
chr16:3030523|3030783 hsa-miR-3155a 0 1 0
chr16:3030523|3030783 hsa-miR-3178 1 0 0
chr16:3030523|3030783 hsa-miR-320e 0 1 0
chr16:3030523|3030783 hsa-miR-3193 0 1 0
chr16:3030523|3030783 hsa-miR-4294 1 0 0
chr16:3030523|3030783 hsa-miR-4271 1 0 0
chr16:3030523|3030783 hsa-miR-3652 1 1 0
chr16:3030523|3030783 hsa-miR-3661 0 1 0
chr16:3030523|3030783 hsa-miR-4429 1 1 0
chr16:3030523|3030783 hsa-miR-4430 1 1 0
chr16:3030523|3030783 hsa-miR-4443 0 1 0
chr16:3030523|3030783 hsa-miR-4454 0 1 0
chr16:3030523|3030783 hsa-miR-3135b 1 1 0
chr16:3030523|3030783 hsa-miR-3689c 0 1 0
chr16:3030523|3030783 hsa-miR-3155b 0 1 0
chr16:3030523|3030783 hsa-miR-4492 0 1 0
chr16:3030523|3030783 hsa-miR-4498 1 1 0
chr16:3030523|3030783 hsa-miR-4505 1 1 0
chr16:3030523|3030783 hsa-miR-2392 1 0 0
chr16:3030523|3030783 hsa-miR-4507 1 0 0
chr16:3030523|3030783 hsa-miR-4515 1 0 0
chr16:3030523|3030783 hsa-miR-4525 1 0 0
chr16:3030523|3030783 hsa-miR-1587 1 1 0
chr16:3030523|3030783 hsa-miR-4537 1 0 0
chr16:3030523|3030783 hsa-miR-4651 1 0 0
chr16:3030523|3030783 hsa-miR-4656 1 1 0
chr16:3030523|3030783 hsa-miR-4658 0 1 0
chr16:3030523|3030783 hsa-miR-4688 1 0 0
chr16:3030523|3030783 hsa-miR-4689 0 1 0
chr16:3030523|3030783 hsa-miR-4706 1 0 0
chr16:3030523|3030783 hsa-miR-4734 1 0 0
chr16:3030523|3030783 hsa-miR-4739 1 0 0
chr16:3030523|3030783 hsa-miR-4741 1 0 0
chr16:3030523|3030783 hsa-miR-5090 1 0 0
chr16:3030523|3030783 hsa-miR-5698 1 0 0
chr16:3030523|3030783 hsa-miR-5787 1 1 0
chr16:3030523|3030783 hsa-miR-6081 1 1 0
chr16:3030523|3030783 hsa-miR-6085 1 1 0
chr16:3030523|3030783 hsa-miR-6086 1 0 0
chr16:3030523|3030783 hsa-miR-6090 1 0 0
chr16:3030523|3030783 hsa-miR-6132 1 1 0
chr16:3030523|3030783 hsa-miR-6860 1 0 0
chr16:3030523|3030783 hsa-miR-6863 1 0 0
chr16:3030523|3030783 hsa-miR-7150 1 0 0
chr16:3030523|3030783 hsa-miR-8072 1 0 0
chr16:3030523|3030783 hsa-miR-8089 1 0 0
chr16:3030523|3030783 hsa-miR-4731-5p 1 1 0
chr16:3030523|3030783 hsa-miR-7155-5p 1 0 0
chr16:3030523|3030783 hsa-miR-671-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6825-5p 1 1 0
chr16:3030523|3030783 hsa-miR-210-5p 0 1 0
chr16:3030523|3030783 hsa-miR-6799-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6510-5p 1 0 0
chr16:3030523|3030783 hsa-miR-139-3p 1 0 0
chr16:3030523|3030783 hsa-miR-1236-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6089 1 1 0
chr16:3030523|3030783 hsa-miR-3192-5p 0 1 0
chr16:3030523|3030783 hsa-miR-7847-3p 1 0 0
chr16:3030523|3030783 hsa-miR-4755-3p 0 1 0
chr16:3030523|3030783 hsa-miR-7160-5p 1 1 0
chr16:3030523|3030783 hsa-miR-6820-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6727-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6842-3p 1 0 0
chr16:3030523|3030783 hsa-miR-6796-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6829-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6732-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6805-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6798-5p 1 1 0
chr16:3030523|3030783 hsa-miR-6810-5p 1 0 0
chr16:3030523|3030783 hsa-miR-30b-3p 0 1 0
chr16:3030523|3030783 hsa-miR-5008-5p 1 1 0
chr16:3030523|3030783 hsa-miR-5006-5p 0 1 0
chr16:3030523|3030783 hsa-miR-3934-3p 0 1 0
chr16:3030523|3030783 hsa-miR-5088-5p 1 1 0
chr16:3030523|3030783 hsa-miR-1226-5p 1 1 0
chr16:3030523|3030783 hsa-miR-6784-5p 1 0 0
chr16:3030523|3030783 hsa-miR-296-3p 1 1 0
chr16:3030523|3030783 hsa-miR-6823-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6847-5p 1 0 0
chr16:3030523|3030783 hsa-miR-4446-3p 0 1 0
chr16:3030523|3030783 hsa-miR-149-3p 0 1 0
chr16:3030523|3030783 hsa-miR-3162-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6786-3p 0 1 0
chr16:3030523|3030783 hsa-miR-194-3p 1 0 0
chr16:3030523|3030783 hsa-miR-5010-5p 0 1 0
chr16:3030523|3030783 hsa-miR-3678-3p 0 1 0
chr16:3030523|3030783 hsa-miR-3191-3p 1 1 0
chr16:3030523|3030783 hsa-miR-7846-3p 1 0 0
chr16:3030523|3030783 hsa-miR-2355-5p 0 1 0
chr16:3030523|3030783 hsa-miR-6748-3p 0 1 0
chr16:3030523|3030783 hsa-miR-3152-3p 1 0 0
chr16:3030523|3030783 hsa-miR-4650-5p 0 1 0
chr16:3030523|3030783 hsa-miR-3689b-3p 0 1 0
chr16:3030523|3030783 hsa-miR-4763-3p 1 0 0
chr16:3030523|3030783 hsa-miR-6787-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6870-5p 1 0 0
chr16:3030523|3030783 hsa-miR-5001-5p 1 1 0
chr16:3030523|3030783 hsa-miR-6726-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6743-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6752-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6756-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6803-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6813-5p 1 1 0
chr16:3030523|3030783 hsa-miR-6851-5p 1 1 0
chr16:3030523|3030783 hsa-miR-6722-3p 1 1 0
chr16:3030523|3030783 hsa-miR-6751-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6763-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6779-5p 0 1 0
chr16:3030523|3030783 hsa-miR-3620-5p 1 1 0
chr16:3030523|3030783 hsa-miR-5196-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6780b-5p 1 1 0
chr16:3030523|3030783 hsa-miR-6836-5p 1 0 0
chr16:3030523|3030783 hsa-miR-10396a-5p 1 0 0
chr16:3030523|3030783 hsa-miR-10396b-5p 1 0 0
chr16:3030523|3030783 hsa-miR-1909-3p 1 0 0
chr16:3030523|3030783 hsa-miR-328-5p 1 0 0
chr16:3030523|3030783 hsa-miR-4649-5p 1 0 0
chr16:3030523|3030783 hsa-miR-4725-3p 1 1 0
chr16:3030523|3030783 hsa-miR-4749-5p 1 1 0
chr16:3030523|3030783 hsa-miR-6729-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6735-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6777-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6794-5p 1 1 0
chr16:3030523|3030783 hsa-miR-6795-5p 1 0 0
chr16:3030523|3030783 hsa-miR-6846-5p 1 1 0
chr16:3030523|3030783 hsa-miR-6848-5p 1 1 0
chr16:3030523|3030783 hsa-miR-6858-5p 1 1 0
chr16:3030523|3030783 hsa-miR-6889-5p 1 0 0
chr16:3030523|3030783 hsa-miR-4723-5p 1 0 0
chr16:3030523|3030783 hsa-miR-939-5p 1 0 0
chr16:3030523|3030783 hsa-miR-4758-5p 1 0 0
chr16:3030523|3030783 hsa-miR-10394-3p 1 0 0
chr16:3030523|3030783 hsa-miR-6511b-5p 1 0 0
chr16:3030523|3030783 hsa-miR-3940-5p 1 0 0
chr16:3030523|3030783 hsa-miR-4665-5p 1 1 0
chr16:3030523|3030783 hsa-miR-4700-5p 1 0 0
chr16:3030523|3030783 hsa-miR-4646-5p 1 0 0
chr16:3030523|3030783 hsa-miR-4716-3p 0 1 0
chr16:3030523|3030783 hsa-miR-3184-5p 0 1 0
chr16:3030523|3030783 hsa-miR-6790-5p 1 1 0
chr16:3030523|3030783 hsa-miR-320a-3p 0 1 0
chr16:3030523|3030783 hsa-miR-320b 0 1 0
chr16:3030523|3030783 hsa-miR-320c 0 1 0
chr16:3030523|3030783 hsa-miR-10394-5p 0 1 0
chr16:3030523|3030783 hsa-miR-1295b-5p 0 1 0
chr16:3030523|3030783 hsa-miR-320d 0 1 0
chr16:3030523|3030783 hsa-miR-6715b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:3030523|3030783
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MAQIIPQPQLTLTSPCRLSSRVLSSAPASA
Nucleotide Sequence TTGGCTCAGATAATCCCCCAGCCCCAGCTGACACTCACTTCCCCCTGCAGACTCTCCAGCCGCGTCCTCAGCTCTGCTCCAGCCAGTGCCTGA
CircID chr16:3030523|3030783
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MGLQVLPAALQHLVLGKGLRAGDRGSPSQPSARLFWLR
Nucleotide Sequence CTGGGCCTCCAGGTCCTGCCGGCGGCTCTGCAGCATCTGGTTCTGGGGAAAGGCCTGAGAGCTGGGGACAGGGGCAGCCCCTCCCAGCCCTCAGCCCGGCTTTTTTGGCTCAGATAA
CircID chr16:3030523|3030783
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MGTGAAPPSPQPGFFGSDNPPAPADTHFPLQTLQPRPQLCSSQCLSLALSPKGVQF
Nucleotide Sequence CTGGGGACAGGGGCAGCCCCTCCCAGCCCTCAGCCCGGCTTTTTTGGCTCAGATAATCCCCCAGCCCCAGCTGACACTCACTTCCCCCTGCAGACTCTCCAGCCGCGTCCTCAGCTCTGCTCCAGCCAGTGCCTGAGCCTGGCACTGTCCCCGAAGGGCGTCCAGTTC
CircID chr16:3030523|3030783
ORF Type ORF4
Protein Length 54
Nucleotide Length 162
Protein Sequence MGLGDYLSQKSRAEGWEGLPLSPALRPFPRTRCCRAAGRTWRPRSEACVRRWRR
Nucleotide Sequence CTGGGGCTGGGGGATTATCTGAGCCAAAAAAGCCGGGCTGAGGGCTGGGAGGGGCTGCCCCTGTCCCCAGCTCTCAGGCCTTTCCCCAGAACCAGATGCTGCAGAGCCGCCGGCAGGACCTGGAGGCCCAGATCCGAGGCCTGCGTGAGGAGGTGGAGAAGG
CircID chr16:3030523|3030783
ORF Type ORF5
Protein Length 38
Nucleotide Length 117
Protein Sequence MDALRGQCQAQALAGAELRTRLESLQGEVSVSWGWGII
Nucleotide Sequence CTGGACGCCCTTCGGGGACAGTGCCAGGCTCAGGCACTGGCTGGAGCAGAGCTGAGGACGCGGCTGGAGAGTCTGCAGGGGGAAGTGAGTGTCAGCTGGGGCTGGGGGATTATCTGA
CircID chr16:3030523|3030783
ORF Type ORF6
Protein Length 36
Nucleotide Length 111
Protein Sequence MRAGRGCPCPQLSGLSPEPDAAEPPAGPGGPDPRPA
Nucleotide Sequence CTGAGGGCTGGGAGGGGCTGCCCCTGTCCCCAGCTCTCAGGCCTTTCCCCAGAACCAGATGCTGCAGAGCCGCCGGCAGGACCTGGAGGCCCAGATCCGAGGCCTGCGTGA
CircID chr16:3030523|3030783
ORF Type ORF7
Protein Length 39
Nucleotide Length 117
Protein Sequence MGGAAPVPSSQAFPQNQMLQSRRQDLEAQIRGLREEVEK
Nucleotide Sequence CTGGGAGGGGCTGCCCCTGTCCCCAGCTCTCAGGCCTTTCCCCAGAACCAGATGCTGCAGAGCCGCCGGCAGGACCTGGAGGCCCAGATCCGAGGCCTGCGTGAGGAGGTGGAGAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab