CircRNA Information

General Information
circRNA Basic Information
CircID chr16:3030696|3030971
Strand -
CircType exon
Host Gene ENSG00000162069.13;
Algorism CIRI2;
Sequence TTCCCCCTGCAGACTCTCCAGCCGCGTCCTCAGCTCTGCTCCAGCCAGTGCCTGAGCCTGGCACTGTCCCCGAAGGGCGTCCAGTTCCCTCTGAAGTTCCTGCTCAGTCTGGGAGGCCTGGGGAGGTGGAAAGAGGGACAGAGGAGCCTCAGCACCAAGCCCAATGCACCTACTCCCCGCTGGGGACCCAGGCATCCTCCCCAACCTTGTCCAGGGCCCTGGGGTCAGGGCCATCCCACCTGAGCCAGCTGCTGGCTGAGCCGGAGGTTCTGCTCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:3030696|3030971 hsa-miR-33a-5p 0 0 1
chr16:3030696|3030971 hsa-miR-33a-3p 0 0 1
chr16:3030696|3030971 hsa-miR-149-5p 0 0 1
chr16:3030696|3030971 hsa-miR-149-3p 0 0 1
chr16:3030696|3030971 hsa-miR-185-5p 0 0 1
chr16:3030696|3030971 hsa-miR-185-3p 0 0 1
chr16:3030696|3030971 hsa-miR-328-5p 0 0 1
chr16:3030696|3030971 hsa-miR-328-3p 0 0 1
chr16:3030696|3030971 hsa-miR-484 0 1 1
chr16:3030696|3030971 hsa-miR-624-5p 0 0 1
chr16:3030696|3030971 hsa-miR-624-3p 0 0 1
chr16:3030696|3030971 hsa-miR-625-5p 0 0 1
chr16:3030696|3030971 hsa-miR-625-3p 0 0 1
chr16:3030696|3030971 hsa-miR-33b-5p 0 0 1
chr16:3030696|3030971 hsa-miR-33b-3p 0 0 1
chr16:3030696|3030971 hsa-miR-646 0 1 1
chr16:3030696|3030971 hsa-miR-661 1 1 1
chr16:3030696|3030971 hsa-miR-892b 0 0 1
chr16:3030696|3030971 hsa-miR-873-5p 0 0 1
chr16:3030696|3030971 hsa-miR-873-3p 0 0 1
chr16:3030696|3030971 hsa-miR-939-5p 0 0 1
chr16:3030696|3030971 hsa-miR-939-3p 0 0 1
chr16:3030696|3030971 hsa-miR-1205 0 0 1
chr16:3030696|3030971 hsa-miR-1291 0 1 1
chr16:3030696|3030971 hsa-miR-1249-5p 0 0 1
chr16:3030696|3030971 hsa-miR-1249-3p 0 0 1
chr16:3030696|3030971 hsa-miR-125a-3p 0 0 1
chr16:3030696|3030971 hsa-miR-1224-5p 0 1 1
chr16:3030696|3030971 hsa-miR-542-5p 0 0 1
chr16:3030696|3030971 hsa-miR-485-5p 0 0 1
chr16:3030696|3030971 hsa-miR-1184 0 0 1
chr16:3030696|3030971 hsa-miR-1207-3p 0 0 1
chr16:3030696|3030971 hsa-miR-642 0 0 1
chr16:3030696|3030971 hsa-miR-1254 0 0 1
chr16:3030696|3030971 hsa-miR-24 0 0 1
chr16:3030696|3030971 hsa-miR-612 1 1 0
chr16:3030696|3030971 hsa-miR-762 1 0 0
chr16:3030696|3030971 hsa-miR-1182 1 1 0
chr16:3030696|3030971 hsa-miR-1268a 1 0 0
chr16:3030696|3030971 hsa-miR-718 0 1 0
chr16:3030696|3030971 hsa-miR-3155a 0 1 0
chr16:3030696|3030971 hsa-miR-3178 1 0 0
chr16:3030696|3030971 hsa-miR-4298 1 0 0
chr16:3030696|3030971 hsa-miR-4300 1 0 0
chr16:3030696|3030971 hsa-miR-4326 1 1 0
chr16:3030696|3030971 hsa-miR-4281 1 0 0
chr16:3030696|3030971 hsa-miR-3652 1 1 0
chr16:3030696|3030971 hsa-miR-3654 0 1 0
chr16:3030696|3030971 hsa-miR-1268b 1 0 0
chr16:3030696|3030971 hsa-miR-4430 1 1 0
chr16:3030696|3030971 hsa-miR-3135b 1 1 0
chr16:3030696|3030971 hsa-miR-3155b 0 1 0
chr16:3030696|3030971 hsa-miR-4499 1 1 0
chr16:3030696|3030971 hsa-miR-4505 1 0 0
chr16:3030696|3030971 hsa-miR-4507 1 0 0
chr16:3030696|3030971 hsa-miR-4513 1 0 0
chr16:3030696|3030971 hsa-miR-4515 1 0 0
chr16:3030696|3030971 hsa-miR-1587 1 0 0
chr16:3030696|3030971 hsa-miR-4537 1 0 0
chr16:3030696|3030971 hsa-miR-4656 1 0 0
chr16:3030696|3030971 hsa-miR-4663 1 0 0
chr16:3030696|3030971 hsa-miR-4688 1 0 0
chr16:3030696|3030971 hsa-miR-4706 1 1 0
chr16:3030696|3030971 hsa-miR-5090 1 0 0
chr16:3030696|3030971 hsa-miR-5787 1 0 0
chr16:3030696|3030971 hsa-miR-6081 1 1 0
chr16:3030696|3030971 hsa-miR-6086 1 0 0
chr16:3030696|3030971 hsa-miR-6124 1 0 0
chr16:3030696|3030971 hsa-miR-6132 1 1 0
chr16:3030696|3030971 hsa-miR-6165 0 1 0
chr16:3030696|3030971 hsa-miR-6860 0 1 0
chr16:3030696|3030971 hsa-miR-8072 1 0 0
chr16:3030696|3030971 hsa-miR-8089 1 0 0
chr16:3030696|3030971 hsa-miR-12116 1 0 0
chr16:3030696|3030971 hsa-miR-12119 1 0 0
chr16:3030696|3030971 hsa-miR-4433b-3p 1 0 0
chr16:3030696|3030971 hsa-miR-6840-3p 1 0 0
chr16:3030696|3030971 hsa-miR-3157-5p 0 1 0
chr16:3030696|3030971 hsa-miR-671-5p 1 0 0
chr16:3030696|3030971 hsa-miR-3150a-3p 0 1 0
chr16:3030696|3030971 hsa-miR-6861-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6881-3p 0 1 0
chr16:3030696|3030971 hsa-miR-6728-5p 1 1 0
chr16:3030696|3030971 hsa-miR-139-3p 1 0 0
chr16:3030696|3030971 hsa-miR-4722-5p 1 0 0
chr16:3030696|3030971 hsa-miR-4755-3p 0 1 0
chr16:3030696|3030971 hsa-miR-7160-5p 1 1 0
chr16:3030696|3030971 hsa-miR-24-3p 0 1 0
chr16:3030696|3030971 hsa-miR-6820-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6727-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6721-5p 1 0 0
chr16:3030696|3030971 hsa-miR-874-3p 0 1 0
chr16:3030696|3030971 hsa-miR-6873-3p 0 1 0
chr16:3030696|3030971 hsa-miR-6832-3p 0 1 0
chr16:3030696|3030971 hsa-miR-6716-5p 1 0 0
chr16:3030696|3030971 hsa-miR-423-3p 0 1 0
chr16:3030696|3030971 hsa-miR-6772-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6793-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6805-5p 1 0 0
chr16:3030696|3030971 hsa-miR-2467-5p 0 1 0
chr16:3030696|3030971 hsa-miR-23a-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6798-5p 1 1 0
chr16:3030696|3030971 hsa-miR-2467-3p 1 0 0
chr16:3030696|3030971 hsa-miR-6874-5p 1 0 0
chr16:3030696|3030971 hsa-miR-5008-5p 1 1 0
chr16:3030696|3030971 hsa-miR-5006-5p 0 1 0
chr16:3030696|3030971 hsa-miR-6858-3p 1 1 0
chr16:3030696|3030971 hsa-miR-3934-3p 0 1 0
chr16:3030696|3030971 hsa-miR-615-5p 1 0 0
chr16:3030696|3030971 hsa-miR-5088-5p 1 1 0
chr16:3030696|3030971 hsa-miR-1226-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6784-5p 1 1 0
chr16:3030696|3030971 hsa-miR-6753-5p 1 0 0
chr16:3030696|3030971 hsa-miR-619-3p 1 0 0
chr16:3030696|3030971 hsa-miR-5580-5p 0 1 0
chr16:3030696|3030971 hsa-miR-652-5p 1 0 0
chr16:3030696|3030971 hsa-miR-296-3p 1 0 0
chr16:3030696|3030971 hsa-miR-92b-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6780a-3p 0 1 0
chr16:3030696|3030971 hsa-miR-378a-5p 0 1 0
chr16:3030696|3030971 hsa-miR-6802-5p 1 0 0
chr16:3030696|3030971 hsa-miR-1306-5p 0 1 0
chr16:3030696|3030971 hsa-miR-6786-3p 0 1 0
chr16:3030696|3030971 hsa-miR-4646-3p 0 1 0
chr16:3030696|3030971 hsa-miR-7160-3p 1 1 0
chr16:3030696|3030971 hsa-miR-3191-3p 1 1 0
chr16:3030696|3030971 hsa-miR-7846-3p 1 0 0
chr16:3030696|3030971 hsa-miR-4707-5p 1 0 0
chr16:3030696|3030971 hsa-miR-1250-5p 1 0 0
chr16:3030696|3030971 hsa-miR-4732-3p 0 1 0
chr16:3030696|3030971 hsa-miR-6778-3p 0 1 0
chr16:3030696|3030971 hsa-miR-4649-3p 1 1 0
chr16:3030696|3030971 hsa-miR-1244 0 1 0
chr16:3030696|3030971 hsa-miR-6800-3p 0 1 0
chr16:3030696|3030971 hsa-miR-4763-3p 1 0 0
chr16:3030696|3030971 hsa-miR-6787-5p 1 0 0
chr16:3030696|3030971 hsa-miR-1343-5p 1 0 0
chr16:3030696|3030971 hsa-miR-5001-5p 1 1 0
chr16:3030696|3030971 hsa-miR-6726-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6737-5p 1 1 0
chr16:3030696|3030971 hsa-miR-6743-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6756-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6763-5p 1 1 0
chr16:3030696|3030971 hsa-miR-6879-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6852-3p 0 1 0
chr16:3030696|3030971 hsa-miR-1915-3p 1 0 0
chr16:3030696|3030971 hsa-miR-3620-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6836-5p 1 1 0
chr16:3030696|3030971 hsa-miR-10396b-5p 1 0 0
chr16:3030696|3030971 hsa-miR-4685-5p 1 1 0
chr16:3030696|3030971 hsa-miR-4726-5p 1 0 0
chr16:3030696|3030971 hsa-miR-4749-5p 1 1 0
chr16:3030696|3030971 hsa-miR-6735-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6777-5p 1 1 0
chr16:3030696|3030971 hsa-miR-6858-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6889-5p 1 0 0
chr16:3030696|3030971 hsa-miR-4436b-3p 1 0 0
chr16:3030696|3030971 hsa-miR-4758-5p 1 0 0
chr16:3030696|3030971 hsa-miR-4769-5p 0 1 0
chr16:3030696|3030971 hsa-miR-1266-5p 0 1 0
chr16:3030696|3030971 hsa-miR-365a-5p 1 0 0
chr16:3030696|3030971 hsa-miR-365b-5p 0 1 0
chr16:3030696|3030971 hsa-miR-10396a-3p 1 0 0
chr16:3030696|3030971 hsa-miR-3940-5p 1 0 0
chr16:3030696|3030971 hsa-miR-6724-5p 0 1 0
chr16:3030696|3030971 hsa-miR-6791-5p 1 0 0
chr16:3030696|3030971 hsa-miR-769-3p 1 0 0
chr16:3030696|3030971 hsa-miR-6775-3p 0 1 0
chr16:3030696|3030971 hsa-miR-6764-5p 1 1 0
chr16:3030696|3030971 hsa-miR-6715b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:3030696|3030971
ORF Type ORF1
Protein Length 78
Nucleotide Length 237
Protein Sequence MQTLQPRPQLCSSQCLSLALSPKGVQFPLKFLLSLGGLGRWKEGQRSLSTKPNAPTPRWGPRHPPQPCPGPWGQGHPT
Nucleotide Sequence CTGCAGACTCTCCAGCCGCGTCCTCAGCTCTGCTCCAGCCAGTGCCTGAGCCTGGCACTGTCCCCGAAGGGCGTCCAGTTCCCTCTGAAGTTCCTGCTCAGTCTGGGAGGCCTGGGGAGGTGGAAAGAGGGACAGAGGAGCCTCAGCACCAAGCCCAATGCACCTACTCCCCGCTGGGGACCCAGGCATCCTCCCCAACCTTGTCCAGGGCCCTGGGGTCAGGGCCATCCCACCTGA
CircID chr16:3030696|3030971
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MHLLPAGDPGILPNLVQGPGVRAIPPEPAAG
Nucleotide Sequence ATGCACCTACTCCCCGCTGGGGACCCAGGCATCCTCCCCAACCTTGTCCAGGGCCCTGGGGTCAGGGCCATCCCACCTGAGCCAGCTGCTGGCTGA
CircID chr16:3030696|3030971
ORF Type ORF3
Protein Length 80
Nucleotide Length 240
Protein Sequence MLQPVPEPGTVPEGRPVPSEVPAQSGRPGEVERGTEEPQHQAQCTYSPLGTQASSPTLSRALGSGPSHLSQLLAEPEVLL
Nucleotide Sequence CTGCTCCAGCCAGTGCCTGAGCCTGGCACTGTCCCCGAAGGGCGTCCAGTTCCCTCTGAAGTTCCTGCTCAGTCTGGGAGGCCTGGGGAGGTGGAAAGAGGGACAGAGGAGCCTCAGCACCAAGCCCAATGCACCTACTCCCCGCTGGGGACCCAGGCATCCTCCCCAACCTTGTCCAGGGCCCTGGGGTCAGGGCCATCCCACCTGAGCCAGCTGCTGGCTGAGCCGGAGGTTCTGCTC
CircID chr16:3030696|3030971
ORF Type ORF4
Protein Length 78
Nucleotide Length 234
Protein Sequence MALTPGPWTRLGRMPGSPAGSRCIGLGAEAPLSLFPPPQASQTEQELQRELDALRGQCQAQALAGAELRTRLESLQGE
Nucleotide Sequence ATGGCCCTGACCCCAGGGCCCTGGACAAGGTTGGGGAGGATGCCTGGGTCCCCAGCGGGGAGTAGGTGCATTGGGCTTGGTGCTGAGGCTCCTCTGTCCCTCTTTCCACCTCCCCAGGCCTCCCAGACTGAGCAGGAACTTCAGAGGGAACTGGACGCCCTTCGGGGACAGTGCCAGGCTCAGGCACTGGCTGGAGCAGAGCTGAGGACGCGGCTGGAGAGTCTGCAGGGGGAA
CircID chr16:3030696|3030971
ORF Type ORF5
Protein Length 53
Nucleotide Length 162
Protein Sequence MGPQRGVGALGLVLRLLCPSFHLPRPPRLSRNFRGNWTPFGDSARLRHWLEQS
Nucleotide Sequence CTGGGTCCCCAGCGGGGAGTAGGTGCATTGGGCTTGGTGCTGAGGCTCCTCTGTCCCTCTTTCCACCTCCCCAGGCCTCCCAGACTGAGCAGGAACTTCAGAGGGAACTGGACGCCCTTCGGGGACAGTGCCAGGCTCAGGCACTGGCTGGAGCAGAGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab