CircRNA Information

General Information
circRNA Basic Information
CircID chr16:30354685|30354846
Strand -
CircType exon
Host Gene ENSG00000169217.7;
Algorism CIRI2;
Sequence GGGGCAAAGAGGTGTTTCTCAAGCTGAGGAAAGGATGCAGAGGAAGGGAACCGGGTGAGGAGGGGACTCGCCAACAGACGCAGCACAGCAAACATTTTTCCTGGTCTGTGACAGGTACAGTTTGGGAGCGGAGGGAGCACAAAAGCAGGGGCCGAAAGGAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:30354685|30354846 hsa-miR-204-5p 0 0 1
chr16:30354685|30354846 hsa-miR-204-3p 0 0 1
chr16:30354685|30354846 hsa-miR-211-5p 0 0 1
chr16:30354685|30354846 hsa-miR-211-3p 0 0 1
chr16:30354685|30354846 hsa-miR-150-5p 0 0 1
chr16:30354685|30354846 hsa-miR-150-3p 0 0 1
chr16:30354685|30354846 hsa-miR-539-5p 0 0 1
chr16:30354685|30354846 hsa-miR-539-3p 0 0 1
chr16:30354685|30354846 hsa-miR-572 0 0 1
chr16:30354685|30354846 hsa-miR-580-5p 0 0 1
chr16:30354685|30354846 hsa-miR-580-3p 0 0 1
chr16:30354685|30354846 hsa-miR-623 0 0 1
chr16:30354685|30354846 hsa-miR-1238-5p 0 0 1
chr16:30354685|30354846 hsa-miR-1238-3p 0 0 1
chr16:30354685|30354846 hsa-miR-548g-5p 0 0 1
chr16:30354685|30354846 hsa-miR-548g-3p 0 0 1
chr16:30354685|30354846 hsa-miR-1267 0 0 1
chr16:30354685|30354846 hsa-miR-324-5p 0 0 1
chr16:30354685|30354846 hsa-miR-501-5p 0 0 1
chr16:30354685|30354846 hsa-miR-671-3p 1 0 1
chr16:30354685|30354846 hsa-miR-1300 0 0 1
chr16:30354685|30354846 hsa-miR-218 0 0 1
chr16:30354685|30354846 hsa-miR-636 1 0 0
chr16:30354685|30354846 hsa-miR-1248 1 0 0
chr16:30354685|30354846 hsa-miR-1470 1 1 0
chr16:30354685|30354846 hsa-miR-1976 1 0 0
chr16:30354685|30354846 hsa-miR-4326 1 0 0
chr16:30354685|30354846 hsa-miR-3615 1 0 0
chr16:30354685|30354846 hsa-miR-3907 1 0 0
chr16:30354685|30354846 hsa-miR-4494 0 1 0
chr16:30354685|30354846 hsa-miR-5193 0 1 0
chr16:30354685|30354846 hsa-miR-6070 1 1 0
chr16:30354685|30354846 hsa-miR-12122 0 1 0
chr16:30354685|30354846 hsa-miR-6747-3p 1 0 0
chr16:30354685|30354846 hsa-miR-4665-3p 1 0 0
chr16:30354685|30354846 hsa-miR-212-5p 1 0 0
chr16:30354685|30354846 hsa-miR-210-5p 1 0 0
chr16:30354685|30354846 hsa-miR-6881-3p 1 0 0
chr16:30354685|30354846 hsa-miR-1915-5p 1 0 0
chr16:30354685|30354846 hsa-miR-6845-3p 1 0 0
chr16:30354685|30354846 hsa-miR-877-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6765-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6728-3p 1 0 0
chr16:30354685|30354846 hsa-miR-7855-5p 1 0 0
chr16:30354685|30354846 hsa-miR-6735-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6882-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6772-3p 1 0 0
chr16:30354685|30354846 hsa-miR-5010-3p 1 0 0
chr16:30354685|30354846 hsa-miR-5001-3p 1 0 0
chr16:30354685|30354846 hsa-miR-7113-3p 1 0 0
chr16:30354685|30354846 hsa-miR-3667-3p 1 1 0
chr16:30354685|30354846 hsa-miR-642b-5p 1 1 0
chr16:30354685|30354846 hsa-miR-6809-3p 1 0 0
chr16:30354685|30354846 hsa-miR-7111-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6780a-3p 1 1 0
chr16:30354685|30354846 hsa-miR-4667-3p 1 0 0
chr16:30354685|30354846 hsa-miR-1237-3p 1 0 0
chr16:30354685|30354846 hsa-miR-7106-3p 1 0 0
chr16:30354685|30354846 hsa-miR-2114-5p 0 1 0
chr16:30354685|30354846 hsa-miR-597-3p 1 0 0
chr16:30354685|30354846 hsa-miR-2276-5p 1 0 0
chr16:30354685|30354846 hsa-miR-6752-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6826-3p 0 1 0
chr16:30354685|30354846 hsa-miR-5088-3p 1 1 0
chr16:30354685|30354846 hsa-miR-6767-5p 0 1 0
chr16:30354685|30354846 hsa-miR-6883-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6851-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6734-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6885-3p 1 0 0
chr16:30354685|30354846 hsa-miR-320a-5p 1 0 0
chr16:30354685|30354846 hsa-miR-4685-3p 1 1 0
chr16:30354685|30354846 hsa-miR-6754-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6852-3p 1 0 0
chr16:30354685|30354846 hsa-miR-5008-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6877-3p 1 0 0
chr16:30354685|30354846 hsa-miR-10398-5p 1 1 0
chr16:30354685|30354846 hsa-miR-6893-3p 1 0 0
chr16:30354685|30354846 hsa-miR-4757-5p 1 0 0
chr16:30354685|30354846 hsa-miR-6511a-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6756-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6862-3p 1 1 0
chr16:30354685|30354846 hsa-miR-6805-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6810-3p 1 1 0
chr16:30354685|30354846 hsa-miR-6829-3p 1 0 0
chr16:30354685|30354846 hsa-miR-10392-3p 1 1 0
chr16:30354685|30354846 hsa-miR-3059-5p 1 0 0
chr16:30354685|30354846 hsa-miR-6511b-3p 1 0 0
chr16:30354685|30354846 hsa-miR-6891-3p 1 1 0
chr16:30354685|30354846 hsa-miR-5006-3p 1 1 0
chr16:30354685|30354846 hsa-miR-412-3p 1 0 0
chr16:30354685|30354846 hsa-miR-202-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:30354685|30354846
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MRKGCRGREPGEEGTRQQTQHSKHFSWSVTGTVWERREHKSRGRKE
Nucleotide Sequence CTGAGGAAAGGATGCAGAGGAAGGGAACCGGGTGAGGAGGGGACTCGCCAACAGACGCAGCACAGCAAACATTTTTCCTGGTCTGTGACAGGTACAGTTTGGGAGCGGAGGGAGCACAAAAGCAGGGGCCGAAAGGAA

CircID chr16:30354685|30354846
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MYLSQTRKNVCCAASVGESPPHPVPFLCILSSA
Nucleotide Sequence CTGTACCTGTCACAGACCAGGAAAAATGTTTGCTGTGCTGCGTCTGTTGGCGAGTCCCCTCCTCACCCGGTTCCCTTCCTCTGCATCCTTTCCTCAGCTTGA

CircID chr16:30354685|30354846
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MFAVLRLLASPLLTRFPSSASFPQLEKHLFA
Nucleotide Sequence ATGTTTGCTGTGCTGCGTCTGTTGGCGAGTCCCCTCCTCACCCGGTTCCCTTCCTCTGCATCCTTTCCTCAGCTTGAGAAACACCTCTTTGCC

CircID chr16:30354685|30354846
ORF Type ORF4
Protein Length 49
Nucleotide Length 147
Protein Sequence MLLCSLRSQTVPVTDQEKCLLCCVCWRVPSSPGSLPLHPFLSLRNTSLP
Nucleotide Sequence CTGCTTTTGTGCTCCCTCCGCTCCCAAACTGTACCTGTCACAGACCAGGAAAAATGTTTGCTGTGCTGCGTCTGTTGGCGAGTCCCCTCCTCACCCGGTTCCCTTCCTCTGCATCCTTTCCTCAGCTTGAGAAACACCTCTTTGCCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites