CircRNA Information

General Information
circRNA Basic Information
CircID chr16:30444050|30444387
Strand -
CircType exon
Host Gene ENSG00000179918.16;
Algorism CIRI2;
Sequence TCCCTGTGCAGAAATTAATCAACCCCGTGCAAAGAAAAATCCCTCAACCTGGAATAGCTTCATCTTACTTTGGCAAGAGAAAACAGAGGTATTTTTGCTCCTCTTCTACCCAAGTGATGAACAAATATCCCCCCAAAGTTCAAAATGTTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCACCTAGAAAGGGCAGCCGGAACCACTATGCAGGCAGCCTTCTTTGGAAATTTCTTACAATCAACTCTTGAGAACCATCCGTGATTGTGGACAATGGCTCTAAGGTCCAAACAACTTCTGTTCTTTCATCTCACGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:30444050|30444387 hsa-miR-143-5p 0 0 1
chr16:30444050|30444387 hsa-miR-143-3p 0 0 1
chr16:30444050|30444387 hsa-miR-375-5p 0 0 1
chr16:30444050|30444387 hsa-miR-375-3p 0 0 1
chr16:30444050|30444387 hsa-miR-382-5p 0 0 1
chr16:30444050|30444387 hsa-miR-382-3p 0 0 1
chr16:30444050|30444387 hsa-miR-335-5p 0 0 1
chr16:30444050|30444387 hsa-miR-335-3p 0 0 1
chr16:30444050|30444387 hsa-miR-492 0 0 1
chr16:30444050|30444387 hsa-miR-507 0 0 1
chr16:30444050|30444387 hsa-miR-557 1 1 1
chr16:30444050|30444387 hsa-miR-559 0 0 1
chr16:30444050|30444387 hsa-miR-586 0 0 1
chr16:30444050|30444387 hsa-miR-802 0 0 1
chr16:30444050|30444387 hsa-miR-543 0 0 1
chr16:30444050|30444387 hsa-miR-938 0 0 1
chr16:30444050|30444387 hsa-miR-1180-5p 0 0 1
chr16:30444050|30444387 hsa-miR-1180-3p 0 0 1
chr16:30444050|30444387 hsa-miR-1206 0 0 1
chr16:30444050|30444387 hsa-miR-548j-5p 0 0 1
chr16:30444050|30444387 hsa-miR-548j-3p 0 0 1
chr16:30444050|30444387 hsa-miR-1290 0 0 1
chr16:30444050|30444387 hsa-miR-1275 0 0 1
chr16:30444050|30444387 hsa-miR-548p 0 0 1
chr16:30444050|30444387 hsa-miR-513c-5p 0 0 1
chr16:30444050|30444387 hsa-miR-513c-3p 0 0 1
chr16:30444050|30444387 hsa-miR-127-5p 0 0 1
chr16:30444050|30444387 hsa-miR-140-5p 0 0 1
chr16:30444050|30444387 hsa-miR-1225-5p 0 0 1
chr16:30444050|30444387 hsa-miR-509-3p 0 0 1
chr16:30444050|30444387 hsa-miR-875-5p 0 0 1
chr16:30444050|30444387 hsa-miR-513a-3p 0 0 1
chr16:30444050|30444387 hsa-miR-548b-5p 0 0 1
chr16:30444050|30444387 hsa-miR-548d-5p 0 0 1
chr16:30444050|30444387 hsa-miR-508-3p 0 0 1
chr16:30444050|30444387 hsa-miR-548c-5p 0 0 1
chr16:30444050|30444387 hsa-miR-548a-5p 0 0 1
chr16:30444050|30444387 hsa-miR-548i 0 0 1
chr16:30444050|30444387 hsa-miR-220c 0 0 1
chr16:30444050|30444387 hsa-miR-153 0 0 1
chr16:30444050|30444387 hsa-miR-544 0 0 1
chr16:30444050|30444387 hsa-miR-219-1-3p 0 0 1
chr16:30444050|30444387 hsa-miR-219-5p 0 0 1
chr16:30444050|30444387 hsa-miR-548h 0 0 1
chr16:30444050|30444387 hsa-miR-1259 0 0 1
chr16:30444050|30444387 hsa-miR-622 1 0 0
chr16:30444050|30444387 hsa-miR-1293 0 1 0
chr16:30444050|30444387 hsa-miR-3132 1 1 0
chr16:30444050|30444387 hsa-miR-3185 1 0 0
chr16:30444050|30444387 hsa-miR-4510 1 0 0
chr16:30444050|30444387 hsa-miR-4525 1 0 0
chr16:30444050|30444387 hsa-miR-4647 0 1 0
chr16:30444050|30444387 hsa-miR-4741 1 0 0
chr16:30444050|30444387 hsa-miR-5194 1 0 0
chr16:30444050|30444387 hsa-miR-5787 1 0 0
chr16:30444050|30444387 hsa-miR-6081 1 0 0
chr16:30444050|30444387 hsa-miR-6088 1 1 0
chr16:30444050|30444387 hsa-miR-12119 0 1 0
chr16:30444050|30444387 hsa-miR-12120 1 0 0
chr16:30444050|30444387 hsa-miR-203a-5p 0 1 0
chr16:30444050|30444387 hsa-miR-3157-5p 1 0 0
chr16:30444050|30444387 hsa-miR-6728-5p 1 1 0
chr16:30444050|30444387 hsa-miR-1236-5p 1 0 0
chr16:30444050|30444387 hsa-miR-5187-5p 1 1 0
chr16:30444050|30444387 hsa-miR-6089 1 0 0
chr16:30444050|30444387 hsa-miR-197-5p 1 1 0
chr16:30444050|30444387 hsa-miR-656-5p 0 1 0
chr16:30444050|30444387 hsa-miR-6770-5p 1 0 0
chr16:30444050|30444387 hsa-miR-7109-5p 1 0 0
chr16:30444050|30444387 hsa-miR-1226-5p 1 0 0
chr16:30444050|30444387 hsa-miR-1229-5p 0 1 0
chr16:30444050|30444387 hsa-miR-4640-5p 1 0 0
chr16:30444050|30444387 hsa-miR-1228-5p 1 0 0
chr16:30444050|30444387 hsa-miR-4650-3p 0 1 0
chr16:30444050|30444387 hsa-miR-3614-5p 0 1 0
chr16:30444050|30444387 hsa-miR-6823-5p 1 0 0
chr16:30444050|30444387 hsa-miR-6780a-3p 0 1 0
chr16:30444050|30444387 hsa-miR-6507-5p 1 0 0
chr16:30444050|30444387 hsa-miR-5010-5p 1 0 0
chr16:30444050|30444387 hsa-miR-6814-5p 1 0 0
chr16:30444050|30444387 hsa-miR-2277-5p 1 0 0
chr16:30444050|30444387 hsa-miR-6812-5p 1 0 0
chr16:30444050|30444387 hsa-miR-6803-5p 1 0 0
chr16:30444050|30444387 hsa-miR-7110-5p 1 0 0
chr16:30444050|30444387 hsa-miR-6774-5p 1 0 0
chr16:30444050|30444387 hsa-miR-328-5p 1 0 0
chr16:30444050|30444387 hsa-miR-6738-5p 1 0 0
chr16:30444050|30444387 hsa-miR-6795-5p 1 0 0
chr16:30444050|30444387 hsa-miR-6887-5p 1 0 0
chr16:30444050|30444387 hsa-miR-4769-5p 1 0 0
chr16:30444050|30444387 hsa-miR-365a-5p 1 0 0
chr16:30444050|30444387 hsa-miR-6856-5p 1 0 0
chr16:30444050|30444387 hsa-miR-1914-3p 1 0 0
chr16:30444050|30444387 hsa-miR-137-5p 1 0 0
chr16:30444050|30444387 hsa-miR-6500-5p 1 0 0
chr16:30444050|30444387 hsa-miR-4690-3p 1 1 0
chr16:30444050|30444387 hsa-miR-3059-3p 1 0 0
chr16:30444050|30444387 hsa-miR-1912-5p 1 0 0
chr16:30444050|30444387 hsa-miR-514b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:30444050|30444387
ORF Type ORF1
Protein Length 46
Nucleotide Length 141
Protein Sequence MLLWPRNAYKDCFRWADSNHLERAAGTTMQAAFFGNFLQSTLENHP
Nucleotide Sequence ATGTTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCACCTAGAAAGGGCAGCCGGAACCACTATGCAGGCAGCCTTCTTTGGAAATTTCTTACAATCAACTCTTGAGAACCATCCGTGA
CircID chr16:30444050|30444387
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MLLFYPSDEQISPQSSKCYSGLGMHIKTALDGLIPIT
Nucleotide Sequence TTGCTCCTCTTCTACCCAAGTGATGAACAAATATCCCCCCAAAGTTCAAAATGTTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCACCTAG
CircID chr16:30444050|30444387
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MDLRAIVHNHGWFSRVDCKKFPKKAACIVVPAALSR
Nucleotide Sequence TTGGACCTTAGAGCCATTGTCCACAATCACGGATGGTTCTCAAGAGTTGATTGTAAGAAATTTCCAAAGAAGGCTGCCTGCATAGTGGTTCCGGCTGCCCTTTCTAGGTGA
CircID chr16:30444050|30444387
ORF Type ORF4
Protein Length 46
Nucleotide Length 141
Protein Sequence MESAHLKQSLYAFRGQSNILNFGGIFVHHLGRRGAKIPLFSLAKVR
Nucleotide Sequence TTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAACATTTTGAACTTTGGGGGGATATTTGTTCATCACTTGGGTAGAAGAGGAGCAAAAATACCTCTGTTTTCTCTTGCCAAAGTAAGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab