CircRNA Information

General Information
circRNA Basic Information
CircID chr16:30716162|30716479
Strand +
CircType exon
Host Gene ENSG00000080603.15;
Algorism CIRI2;
Sequence CTGGAGGGGATGGACATCCGTGGCCCTTAGCACCAGAGAGGCGGTGCTGAAGCAGATGCCTGGGGTGATGAAAGGGGAGGTAACCGGTCGAGGGTCGAACAGATTTGGATGATTGCAAACTTTTCTCAGCTGCATCAAAATGTTGATGACGCTCATGAAATGGCCTGTGGCTAGTGTCTCCTTAGTTCTGGGGAAAGAGGAAAAATAAATGAGACGTCCTAACAGCCACCTACACTCCAATCTCGAGTCCCAGGGCCCACCCTCCTTCCTCCCTTACGTGGTCTGTGCCATGAAGTCATCATAGAGACAGCGTTGACG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:30716162|30716479 hsa-miR-183-5p 0 0 1
chr16:30716162|30716479 hsa-miR-183-3p 0 0 1
chr16:30716162|30716479 hsa-miR-122-5p 0 0 1
chr16:30716162|30716479 hsa-miR-122-3p 0 0 1
chr16:30716162|30716479 hsa-miR-326 0 0 1
chr16:30716162|30716479 hsa-miR-433-5p 0 0 1
chr16:30716162|30716479 hsa-miR-433-3p 0 0 1
chr16:30716162|30716479 hsa-miR-539-5p 0 0 1
chr16:30716162|30716479 hsa-miR-539-3p 0 0 1
chr16:30716162|30716479 hsa-miR-551a 0 0 1
chr16:30716162|30716479 hsa-miR-561-5p 0 0 1
chr16:30716162|30716479 hsa-miR-561-3p 0 0 1
chr16:30716162|30716479 hsa-miR-551b-5p 0 0 1
chr16:30716162|30716479 hsa-miR-551b-3p 0 0 1
chr16:30716162|30716479 hsa-miR-593-5p 0 0 1
chr16:30716162|30716479 hsa-miR-593-3p 0 0 1
chr16:30716162|30716479 hsa-miR-617 0 0 1
chr16:30716162|30716479 hsa-miR-626 0 0 1
chr16:30716162|30716479 hsa-miR-1301-5p 0 0 1
chr16:30716162|30716479 hsa-miR-1301-3p 0 0 1
chr16:30716162|30716479 hsa-miR-541-5p 0 0 1
chr16:30716162|30716479 hsa-miR-541-3p 0 0 1
chr16:30716162|30716479 hsa-miR-1238-5p 0 0 1
chr16:30716162|30716479 hsa-miR-1238-3p 0 0 1
chr16:30716162|30716479 hsa-miR-1291 0 1 1
chr16:30716162|30716479 hsa-miR-1258 0 0 1
chr16:30716162|30716479 hsa-miR-1272 0 1 1
chr16:30716162|30716479 hsa-miR-1321 0 0 1
chr16:30716162|30716479 hsa-miR-1322 0 0 1
chr16:30716162|30716479 hsa-miR-296-5p 0 0 1
chr16:30716162|30716479 hsa-miR-654-5p 0 1 1
chr16:30716162|30716479 hsa-miR-409-5p 0 0 1
chr16:30716162|30716479 hsa-miR-330-5p 0 0 1
chr16:30716162|30716479 hsa-miR-450b-5p 0 0 1
chr16:30716162|30716479 hsa-miR-608 1 1 0
chr16:30716162|30716479 hsa-miR-762 1 0 0
chr16:30716162|30716479 hsa-miR-760 1 0 0
chr16:30716162|30716479 hsa-miR-1470 1 0 0
chr16:30716162|30716479 hsa-miR-548q 0 1 0
chr16:30716162|30716479 hsa-miR-4298 1 0 0
chr16:30716162|30716479 hsa-miR-3661 1 0 0
chr16:30716162|30716479 hsa-miR-4428 0 1 0
chr16:30716162|30716479 hsa-miR-4462 1 0 0
chr16:30716162|30716479 hsa-miR-4476 0 1 0
chr16:30716162|30716479 hsa-miR-4533 1 1 0
chr16:30716162|30716479 hsa-miR-4674 1 1 0
chr16:30716162|30716479 hsa-miR-4686 0 1 0
chr16:30716162|30716479 hsa-miR-4721 1 0 0
chr16:30716162|30716479 hsa-miR-4739 1 1 0
chr16:30716162|30716479 hsa-miR-4788 0 1 0
chr16:30716162|30716479 hsa-miR-5193 1 1 0
chr16:30716162|30716479 hsa-miR-5572 1 1 0
chr16:30716162|30716479 hsa-miR-6090 1 0 0
chr16:30716162|30716479 hsa-miR-6127 1 0 0
chr16:30716162|30716479 hsa-miR-6133 1 1 0
chr16:30716162|30716479 hsa-miR-7974 1 0 0
chr16:30716162|30716479 hsa-miR-8052 1 0 0
chr16:30716162|30716479 hsa-miR-8089 1 0 0
chr16:30716162|30716479 hsa-miR-12114 1 0 0
chr16:30716162|30716479 hsa-miR-150-3p 1 1 0
chr16:30716162|30716479 hsa-miR-15a-3p 0 1 0
chr16:30716162|30716479 hsa-miR-504-3p 1 0 0
chr16:30716162|30716479 hsa-miR-6747-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6836-3p 1 0 0
chr16:30716162|30716479 hsa-miR-7106-5p 1 1 0
chr16:30716162|30716479 hsa-miR-6894-5p 1 1 0
chr16:30716162|30716479 hsa-miR-4687-3p 1 0 0
chr16:30716162|30716479 hsa-miR-6892-3p 1 0 0
chr16:30716162|30716479 hsa-miR-6881-3p 0 1 0
chr16:30716162|30716479 hsa-miR-766-5p 0 1 0
chr16:30716162|30716479 hsa-miR-7851-3p 1 0 0
chr16:30716162|30716479 hsa-miR-6842-3p 1 0 0
chr16:30716162|30716479 hsa-miR-6742-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6716-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6871-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6748-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6772-5p 1 0 0
chr16:30716162|30716479 hsa-miR-4655-3p 1 0 0
chr16:30716162|30716479 hsa-miR-6782-5p 1 0 0
chr16:30716162|30716479 hsa-miR-3691-3p 0 1 0
chr16:30716162|30716479 hsa-miR-6835-5p 1 0 0
chr16:30716162|30716479 hsa-miR-149-3p 1 0 0
chr16:30716162|30716479 hsa-miR-6824-5p 1 0 0
chr16:30716162|30716479 hsa-miR-3162-5p 0 1 0
chr16:30716162|30716479 hsa-miR-1307-5p 1 1 0
chr16:30716162|30716479 hsa-miR-6892-5p 0 1 0
chr16:30716162|30716479 hsa-miR-7160-3p 1 0 0
chr16:30716162|30716479 hsa-miR-211-5p 1 0 0
chr16:30716162|30716479 hsa-miR-7848-3p 0 1 0
chr16:30716162|30716479 hsa-miR-2355-5p 0 1 0
chr16:30716162|30716479 hsa-miR-5197-3p 0 1 0
chr16:30716162|30716479 hsa-miR-204-5p 0 1 0
chr16:30716162|30716479 hsa-miR-130b-5p 0 1 0
chr16:30716162|30716479 hsa-miR-219b-5p 0 1 0
chr16:30716162|30716479 hsa-miR-4704-5p 0 1 0
chr16:30716162|30716479 hsa-miR-6800-3p 1 1 0
chr16:30716162|30716479 hsa-miR-1233-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6769b-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6778-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6812-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6865-5p 1 1 0
chr16:30716162|30716479 hsa-miR-6737-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6752-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6756-5p 1 1 0
chr16:30716162|30716479 hsa-miR-6803-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6815-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6819-5p 1 0 0
chr16:30716162|30716479 hsa-miR-7110-5p 1 0 0
chr16:30716162|30716479 hsa-miR-10401-5p 1 0 0
chr16:30716162|30716479 hsa-miR-1249-5p 1 1 0
chr16:30716162|30716479 hsa-miR-6751-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6763-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6797-5p 1 0 0
chr16:30716162|30716479 hsa-miR-3127-3p 1 0 0
chr16:30716162|30716479 hsa-miR-328-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6848-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6858-5p 1 0 0
chr16:30716162|30716479 hsa-miR-6883-5p 1 0 0
chr16:30716162|30716479 hsa-miR-365a-5p 1 0 0
chr16:30716162|30716479 hsa-miR-3173-3p 0 1 0
chr16:30716162|30716479 hsa-miR-4747-5p 0 1 0
chr16:30716162|30716479 hsa-miR-6876-5p 0 1 0
chr16:30716162|30716479 hsa-miR-6724-5p 1 1 0
chr16:30716162|30716479 hsa-miR-6791-5p 1 1 0
chr16:30716162|30716479 hsa-miR-10400-3p 1 0 0
chr16:30716162|30716479 hsa-miR-3059-5p 0 1 0
chr16:30716162|30716479 hsa-miR-4723-3p 0 1 0
chr16:30716162|30716479 hsa-miR-3150b-5p 1 0 0
chr16:30716162|30716479 hsa-miR-410-5p 1 0 0
chr16:30716162|30716479 hsa-miR-3117-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:30716162|30716479
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MQTFLSCIKMLMTLMKWPVASVSLVLGKEEK
Nucleotide Sequence TTGCAAACTTTTCTCAGCTGCATCAAAATGTTGATGACGCTCATGAAATGGCCTGTGGCTAGTGTCTCCTTAGTTCTGGGGAAAGAGGAAAAATAA
CircID chr16:30716162|30716479
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MRRPNSHLHSNLESQGPPSFLPYVVCAMKSS
Nucleotide Sequence ATGAGACGTCCTAACAGCCACCTACACTCCAATCTCGAGTCCCAGGGCCCACCCTCCTTCCTCCCTTACGTGGTCTGTGCCATGAAGTCATCATAG
CircID chr16:30716162|30716479
ORF Type ORF3
Protein Length 80
Nucleotide Length 240
Protein Sequence MECRWLLGRLIYFSSFPRTKETLATGHFMSVINILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQ
Nucleotide Sequence TTGGAGTGTAGGTGGCTGTTAGGACGTCTCATTTATTTTTCCTCTTTCCCCAGAACTAAGGAGACACTAGCCACAGGCCATTTCATGAGCGTCATCAACATTTTGATGCAGCTGAGAAAAGTTTGCAATCATCCAAATCTGTTCGACCCTCGACCGGTTACCTCCCCTTTCATCACCCCAGGCATCTGCTTCAGCACCGCCTCTCTGGTGCTAAGGGCCACGGATGTCCATCCCCTCCAG
CircID chr16:30716162|30716479
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MMTSWHRPRKGGRRVGPGTRDWSVGGC
Nucleotide Sequence ATGATGACTTCATGGCACAGACCACGTAAGGGAGGAAGGAGGGTGGGCCCTGGGACTCGAGATTGGAGTGTAGGTGGCTGTTAG
CircID chr16:30716162|30716479
ORF Type ORF5
Protein Length 39
Nucleotide Length 117
Protein Sequence MQSSKSVRPSTGYLPFHHPRHLLQHRLSGAKGHGCPSPP
Nucleotide Sequence TTGCAATCATCCAAATCTGTTCGACCCTCGACCGGTTACCTCCCCTTTCATCACCCCAGGCATCTGCTTCAGCACCGCCTCTCTGGTGCTAAGGGCCACGGATGTCCATCCCCTCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab