CircRNA Information

General Information
circRNA Basic Information
CircID chr16:30768874|30768987
Strand +
CircType exon
Host Gene ENSG00000103549.20;
Algorism CIRI2;
Sequence CTGCTTGGTGGCACCCAGCTTGCGCTGCAGGTGTTCTATCTGCTCCTCTGCCTGCCGAATGCGCCGCAGGGCATCCTCATCCGCGATCTTCTTGCTCTCCCTTCGATCCCTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:30768874|30768987 hsa-miR-638 1 1 1
chr16:30768874|30768987 hsa-miR-874-5p 0 0 1
chr16:30768874|30768987 hsa-miR-874-3p 0 0 1
chr16:30768874|30768987 hsa-miR-1227-5p 0 0 1
chr16:30768874|30768987 hsa-miR-1227-3p 0 0 1
chr16:30768874|30768987 hsa-miR-1255a 0 0 1
chr16:30768874|30768987 hsa-miR-146b-3p 0 0 1
chr16:30768874|30768987 hsa-miR-1184 0 1 1
chr16:30768874|30768987 hsa-miR-1255b 0 0 1
chr16:30768874|30768987 hsa-miR-1185 0 0 1
chr16:30768874|30768987 hsa-miR-658 1 0 0
chr16:30768874|30768987 hsa-miR-1469 1 0 0
chr16:30768874|30768987 hsa-miR-3132 1 0 0
chr16:30768874|30768987 hsa-miR-3141 1 0 0
chr16:30768874|30768987 hsa-miR-3147 1 0 0
chr16:30768874|30768987 hsa-miR-3197 1 0 0
chr16:30768874|30768987 hsa-miR-3935 0 1 0
chr16:30768874|30768987 hsa-miR-3937 1 0 0
chr16:30768874|30768987 hsa-miR-4510 1 0 0
chr16:30768874|30768987 hsa-miR-4533 1 0 0
chr16:30768874|30768987 hsa-miR-3960 1 0 0
chr16:30768874|30768987 hsa-miR-4654 1 0 0
chr16:30768874|30768987 hsa-miR-4656 1 0 0
chr16:30768874|30768987 hsa-miR-4688 1 1 0
chr16:30768874|30768987 hsa-miR-4692 0 1 0
chr16:30768874|30768987 hsa-miR-4706 1 0 0
chr16:30768874|30768987 hsa-miR-4721 1 0 0
chr16:30768874|30768987 hsa-miR-4734 1 0 0
chr16:30768874|30768987 hsa-miR-4739 1 0 0
chr16:30768874|30768987 hsa-miR-5192 1 0 0
chr16:30768874|30768987 hsa-miR-5194 1 0 0
chr16:30768874|30768987 hsa-miR-5698 1 0 0
chr16:30768874|30768987 hsa-miR-5739 1 0 0
chr16:30768874|30768987 hsa-miR-6090 1 0 0
chr16:30768874|30768987 hsa-miR-6125 1 0 0
chr16:30768874|30768987 hsa-miR-6127 1 0 0
chr16:30768874|30768987 hsa-miR-6129 1 0 0
chr16:30768874|30768987 hsa-miR-6133 1 0 0
chr16:30768874|30768987 hsa-miR-6165 1 0 0
chr16:30768874|30768987 hsa-miR-7150 1 0 0
chr16:30768874|30768987 hsa-miR-7704 1 0 0
chr16:30768874|30768987 hsa-miR-8072 1 0 0
chr16:30768874|30768987 hsa-miR-8085 1 0 0
chr16:30768874|30768987 hsa-miR-135a-3p 1 0 0
chr16:30768874|30768987 hsa-miR-3194-3p 0 1 0
chr16:30768874|30768987 hsa-miR-671-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6757-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6873-5p 1 1 0
chr16:30768874|30768987 hsa-miR-5589-5p 0 1 0
chr16:30768874|30768987 hsa-miR-7845-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6827-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6798-5p 1 0 0
chr16:30768874|30768987 hsa-miR-3126-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6760-5p 1 1 0
chr16:30768874|30768987 hsa-miR-2467-3p 0 1 0
chr16:30768874|30768987 hsa-miR-6782-5p 1 0 0
chr16:30768874|30768987 hsa-miR-1226-5p 1 0 0
chr16:30768874|30768987 hsa-miR-1229-5p 1 0 0
chr16:30768874|30768987 hsa-miR-885-3p 1 0 0
chr16:30768874|30768987 hsa-miR-4732-5p 1 0 0
chr16:30768874|30768987 hsa-miR-4713-3p 1 0 0
chr16:30768874|30768987 hsa-miR-6847-5p 1 1 0
chr16:30768874|30768987 hsa-miR-3202 1 0 0
chr16:30768874|30768987 hsa-miR-149-3p 1 0 0
chr16:30768874|30768987 hsa-miR-6828-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6877-5p 1 0 0
chr16:30768874|30768987 hsa-miR-5010-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6864-5p 1 0 0
chr16:30768874|30768987 hsa-miR-7112-5p 1 0 0
chr16:30768874|30768987 hsa-miR-423-5p 0 1 0
chr16:30768874|30768987 hsa-miR-4746-3p 1 0 0
chr16:30768874|30768987 hsa-miR-2277-5p 0 1 0
chr16:30768874|30768987 hsa-miR-1207-5p 1 0 0
chr16:30768874|30768987 hsa-miR-4763-3p 1 0 0
chr16:30768874|30768987 hsa-miR-6870-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6775-5p 1 0 0
chr16:30768874|30768987 hsa-miR-1343-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6726-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6743-5p 1 0 0
chr16:30768874|30768987 hsa-miR-1249-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6722-3p 1 0 0
chr16:30768874|30768987 hsa-miR-6779-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6780a-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6797-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6875-5p 1 0 0
chr16:30768874|30768987 hsa-miR-7111-5p 1 0 0
chr16:30768874|30768987 hsa-miR-4728-5p 1 0 0
chr16:30768874|30768987 hsa-miR-1909-3p 1 0 0
chr16:30768874|30768987 hsa-miR-328-5p 1 0 0
chr16:30768874|30768987 hsa-miR-4726-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6729-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6735-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6738-5p 1 1 0
chr16:30768874|30768987 hsa-miR-6794-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6883-5p 1 0 0
chr16:30768874|30768987 hsa-miR-4723-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6831-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6885-5p 1 0 0
chr16:30768874|30768987 hsa-miR-939-5p 1 0 0
chr16:30768874|30768987 hsa-miR-1910-3p 0 1 0
chr16:30768874|30768987 hsa-miR-6511a-5p 0 1 0
chr16:30768874|30768987 hsa-miR-6511b-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6731-5p 1 1 0
chr16:30768874|30768987 hsa-miR-1914-3p 1 0 0
chr16:30768874|30768987 hsa-miR-377-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6891-5p 1 0 0
chr16:30768874|30768987 hsa-miR-4716-3p 1 0 0
chr16:30768874|30768987 hsa-miR-6785-5p 1 0 0
chr16:30768874|30768987 hsa-miR-4667-5p 1 0 0
chr16:30768874|30768987 hsa-miR-6791-5p 1 0 0
chr16:30768874|30768987 hsa-miR-4756-5p 1 0 0
chr16:30768874|30768987 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:30768874|30768987
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence LLGGTQLALQVFYLLLCLPNAPQGILIRDLLALPSIPL
Nucleotide Sequence CTGCTTGGTGGCACCCAGCTTGCGCTGCAGGTGTTCTATCTGCTCCTCTGCCTGCCGAATGCGCCGCAGGGCATCCTCATCCGCGATCTTCTTGCTCTCCCTTCGATCCCTCTC
CircID chr16:30768874|30768987
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MVAPSLRCRCSICSSACRMRRRASSSAIFLLSLRSL
Nucleotide Sequence TTGGTGGCACCCAGCTTGCGCTGCAGGTGTTCTATCTGCTCCTCTGCCTGCCGAATGCGCCGCAGGGCATCCTCATCCGCGATCTTCTTGCTCTCCCTTCGATCCCTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab