CircRNA Information

General Information
circRNA Basic Information
CircID chr16:30768892|30769222
Strand +
CircType exon
Host Gene ENSG00000103549.20;
Algorism CIRI2;
Sequence CTGTCACATCCATCTCTGAGAGCAGAGCCTCCTCCTCCTGCAGCAAGTGGGCAGAGACAAGATGGAACGTGGGAAGTGGACAGGATGGCTGTGGGGGAACCATGGGAAAACGCAGCGAAGCAAAGAACTACAGAGGGGACCCAGATCATCAAGGTCCTGCAGGCACTAGAGGCACCAAACAGGGTATGAAGGGAACTCCCTGCGCTCCGACGCGAGGGCACCACATGGGCCGCACCTGCTTGGTGGCACCCAGCTTGCGCTGCAGGTGTTCTATCTGCTCCTCTGCCTGCCGAATGCGCCGCAGGGCATCCTCATCCGCGATCTTCTTGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:30768892|30769222 hsa-miR-10a-5p 0 0 1
chr16:30768892|30769222 hsa-miR-10a-3p 0 0 1
chr16:30768892|30769222 hsa-miR-10b-5p 0 0 1
chr16:30768892|30769222 hsa-miR-10b-3p 0 0 1
chr16:30768892|30769222 hsa-miR-204-5p 0 0 1
chr16:30768892|30769222 hsa-miR-204-3p 0 0 1
chr16:30768892|30769222 hsa-miR-205-5p 0 0 1
chr16:30768892|30769222 hsa-miR-205-3p 0 0 1
chr16:30768892|30769222 hsa-miR-211-5p 0 0 1
chr16:30768892|30769222 hsa-miR-211-3p 0 0 1
chr16:30768892|30769222 hsa-miR-519e-5p 0 0 1
chr16:30768892|30769222 hsa-miR-519e-3p 0 0 1
chr16:30768892|30769222 hsa-miR-593-5p 0 0 1
chr16:30768892|30769222 hsa-miR-593-3p 0 0 1
chr16:30768892|30769222 hsa-miR-623 0 0 1
chr16:30768892|30769222 hsa-miR-639 0 1 1
chr16:30768892|30769222 hsa-miR-662 0 0 1
chr16:30768892|30769222 hsa-miR-765 0 1 1
chr16:30768892|30769222 hsa-miR-675-5p 0 0 1
chr16:30768892|30769222 hsa-miR-675-3p 0 0 1
chr16:30768892|30769222 hsa-miR-874-5p 0 0 1
chr16:30768892|30769222 hsa-miR-874-3p 0 0 1
chr16:30768892|30769222 hsa-miR-760 1 0 1
chr16:30768892|30769222 hsa-miR-1227-5p 0 0 1
chr16:30768892|30769222 hsa-miR-1227-3p 0 0 1
chr16:30768892|30769222 hsa-miR-1205 0 1 1
chr16:30768892|30769222 hsa-miR-1286 1 1 1
chr16:30768892|30769222 hsa-miR-1255a 0 0 1
chr16:30768892|30769222 hsa-miR-146b-3p 0 0 1
chr16:30768892|30769222 hsa-miR-1184 0 1 1
chr16:30768892|30769222 hsa-miR-361-3p 0 0 1
chr16:30768892|30769222 hsa-miR-767-3p 0 0 1
chr16:30768892|30769222 hsa-miR-188-3p 0 0 1
chr16:30768892|30769222 hsa-miR-324-3p 1 0 1
chr16:30768892|30769222 hsa-miR-485-3p 0 0 1
chr16:30768892|30769222 hsa-miR-515-3p 0 0 1
chr16:30768892|30769222 hsa-miR-542-3p 0 0 1
chr16:30768892|30769222 hsa-miR-1260 0 0 1
chr16:30768892|30769222 hsa-miR-550 0 0 1
chr16:30768892|30769222 hsa-miR-1274b 0 0 1
chr16:30768892|30769222 hsa-miR-1255b 0 0 1
chr16:30768892|30769222 hsa-miR-371-3p 0 0 1
chr16:30768892|30769222 hsa-miR-1185 0 0 1
chr16:30768892|30769222 hsa-miR-346 1 0 0
chr16:30768892|30769222 hsa-miR-661 1 0 0
chr16:30768892|30769222 hsa-miR-933 1 0 0
chr16:30768892|30769222 hsa-miR-1469 1 0 0
chr16:30768892|30769222 hsa-miR-3147 1 0 0
chr16:30768892|30769222 hsa-miR-3665 0 1 0
chr16:30768892|30769222 hsa-miR-3909 0 1 0
chr16:30768892|30769222 hsa-miR-3935 0 1 0
chr16:30768892|30769222 hsa-miR-3937 1 0 0
chr16:30768892|30769222 hsa-miR-4466 0 1 0
chr16:30768892|30769222 hsa-miR-4533 1 0 0
chr16:30768892|30769222 hsa-miR-3960 1 0 0
chr16:30768892|30769222 hsa-miR-4641 0 1 0
chr16:30768892|30769222 hsa-miR-4656 1 0 0
chr16:30768892|30769222 hsa-miR-4688 1 1 0
chr16:30768892|30769222 hsa-miR-4692 0 1 0
chr16:30768892|30769222 hsa-miR-4706 1 0 0
chr16:30768892|30769222 hsa-miR-4734 1 0 0
chr16:30768892|30769222 hsa-miR-6125 1 0 0
chr16:30768892|30769222 hsa-miR-7150 1 0 0
chr16:30768892|30769222 hsa-miR-8072 1 0 0
chr16:30768892|30769222 hsa-miR-504-3p 1 0 0
chr16:30768892|30769222 hsa-miR-3194-3p 1 1 0
chr16:30768892|30769222 hsa-miR-4726-3p 1 0 0
chr16:30768892|30769222 hsa-miR-671-5p 1 0 0
chr16:30768892|30769222 hsa-miR-218-2-3p 0 1 0
chr16:30768892|30769222 hsa-miR-6892-3p 1 0 0
chr16:30768892|30769222 hsa-miR-218-1-3p 0 1 0
chr16:30768892|30769222 hsa-miR-5589-5p 0 1 0
chr16:30768892|30769222 hsa-miR-2467-5p 0 1 0
chr16:30768892|30769222 hsa-miR-6798-5p 1 0 0
chr16:30768892|30769222 hsa-miR-2467-3p 0 1 0
chr16:30768892|30769222 hsa-miR-6728-3p 0 1 0
chr16:30768892|30769222 hsa-miR-4436b-5p 1 1 0
chr16:30768892|30769222 hsa-miR-615-5p 1 0 0
chr16:30768892|30769222 hsa-miR-4793-5p 0 1 0
chr16:30768892|30769222 hsa-miR-1229-5p 1 0 0
chr16:30768892|30769222 hsa-miR-4715-3p 0 1 0
chr16:30768892|30769222 hsa-miR-7161-3p 1 0 0
chr16:30768892|30769222 hsa-miR-3679-3p 0 1 0
chr16:30768892|30769222 hsa-miR-4756-3p 0 1 0
chr16:30768892|30769222 hsa-miR-6847-5p 1 1 0
chr16:30768892|30769222 hsa-miR-642b-5p 0 1 0
chr16:30768892|30769222 hsa-miR-7111-3p 1 0 0
chr16:30768892|30769222 hsa-miR-6780a-3p 0 1 0
chr16:30768892|30769222 hsa-miR-7112-5p 1 0 0
chr16:30768892|30769222 hsa-miR-423-5p 0 1 0
chr16:30768892|30769222 hsa-miR-4776-3p 1 0 0
chr16:30768892|30769222 hsa-miR-1237-3p 1 0 0
chr16:30768892|30769222 hsa-miR-1236-3p 1 0 0
chr16:30768892|30769222 hsa-miR-6720-3p 1 0 0
chr16:30768892|30769222 hsa-miR-4746-3p 1 0 0
chr16:30768892|30769222 hsa-miR-7151-5p 1 0 0
chr16:30768892|30769222 hsa-miR-6826-3p 0 1 0
chr16:30768892|30769222 hsa-miR-5088-3p 1 0 0
chr16:30768892|30769222 hsa-miR-6795-3p 1 0 0
chr16:30768892|30769222 hsa-miR-2277-5p 0 1 0
chr16:30768892|30769222 hsa-miR-6748-3p 0 1 0
chr16:30768892|30769222 hsa-miR-5584-3p 0 1 0
chr16:30768892|30769222 hsa-miR-6847-3p 0 1 0
chr16:30768892|30769222 hsa-miR-6885-3p 1 1 0
chr16:30768892|30769222 hsa-miR-1207-5p 1 0 0
chr16:30768892|30769222 hsa-miR-4763-3p 1 0 0
chr16:30768892|30769222 hsa-miR-1343-5p 1 0 0
chr16:30768892|30769222 hsa-miR-6726-5p 1 0 0
chr16:30768892|30769222 hsa-miR-11181-3p 0 1 0
chr16:30768892|30769222 hsa-miR-320a-5p 1 0 0
chr16:30768892|30769222 hsa-miR-4685-3p 0 1 0
chr16:30768892|30769222 hsa-miR-4755-5p 0 1 0
chr16:30768892|30769222 hsa-miR-4728-5p 1 0 0
chr16:30768892|30769222 hsa-miR-1909-3p 1 0 0
chr16:30768892|30769222 hsa-miR-328-5p 1 0 0
chr16:30768892|30769222 hsa-miR-4649-5p 1 0 0
chr16:30768892|30769222 hsa-miR-6735-5p 1 0 0
chr16:30768892|30769222 hsa-miR-6858-5p 1 0 0
chr16:30768892|30769222 hsa-miR-6885-5p 1 0 0
chr16:30768892|30769222 hsa-miR-1910-3p 0 1 0
chr16:30768892|30769222 hsa-miR-6511a-5p 0 1 0
chr16:30768892|30769222 hsa-miR-6511b-5p 1 0 0
chr16:30768892|30769222 hsa-miR-3085-5p 0 1 0
chr16:30768892|30769222 hsa-miR-377-5p 1 0 0
chr16:30768892|30769222 hsa-miR-3679-5p 1 0 0
chr16:30768892|30769222 hsa-miR-4667-5p 1 0 0
chr16:30768892|30769222 hsa-miR-6791-5p 1 0 0
chr16:30768892|30769222 hsa-miR-550a-3-5p 0 1 0
chr16:30768892|30769222 hsa-miR-550a-5p 0 1 0
chr16:30768892|30769222 hsa-miR-6792-3p 1 1 0
chr16:30768892|30769222 hsa-miR-6805-3p 1 0 0
chr16:30768892|30769222 hsa-miR-4723-3p 1 0 0
chr16:30768892|30769222 hsa-miR-6769b-3p 1 0 0
chr16:30768892|30769222 hsa-miR-10394-5p 0 1 0
chr16:30768892|30769222 hsa-miR-33b-3p 0 1 0
chr16:30768892|30769222 hsa-miR-3619-5p 1 0 0
chr16:30768892|30769222 hsa-miR-5006-3p 0 1 0
chr16:30768892|30769222 hsa-miR-6737-3p 1 0 0
chr16:30768892|30769222 hsa-miR-6843-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:30768892|30769222
ORF Type ORF1
Protein Length 62
Nucleotide Length 189
Protein Sequence LSHPSLRAEPPPPAASGQRQDGTWEVDRMAVGEPWENAAKQRTTEGTQIIKVLQALEAPNRV
Nucleotide Sequence CTGTCACATCCATCTCTGAGAGCAGAGCCTCCTCCTCCTGCAGCAAGTGGGCAGAGACAAGATGGAACGTGGGAAGTGGACAGGATGGCTGTGGGGGAACCATGGGAAAACGCAGCGAAGCAAAGAACTACAGAGGGGACCCAGATCATCAAGGTCCTGCAGGCACTAGAGGCACCAAACAGGGTATGA
CircID chr16:30768892|30769222
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MQQVGRDKMERGKWTGWLWGNHGKTQRSKELQRGPRSSRSCRH
Nucleotide Sequence CTGCAGCAAGTGGGCAGAGACAAGATGGAACGTGGGAAGTGGACAGGATGGCTGTGGGGGAACCATGGGAAAACGCAGCGAAGCAAAGAACTACAGAGGGGACCCAGATCATCAAGGTCCTGCAGGCACTAG
CircID chr16:30768892|30769222
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MRSDARAPHGPHLLGGTQLALQVFYLLLCLPNAPQGILIRDLLA
Nucleotide Sequence CTGCGCTCCGACGCGAGGGCACCACATGGGCCGCACCTGCTTGGTGGCACCCAGCTTGCGCTGCAGGTGTTCTATCTGCTCCTCTGCCTGCCGAATGCGCCGCAGGGCATCCTCATCCGCGATCTTCTTGCT
CircID chr16:30768892|30769222
ORF Type ORF4
Protein Length 76
Nucleotide Length 228
Protein Sequence MGKRSEAKNYRGDPDHQGPAGTRGTKQGMKGTPCAPTRGHHMGRTCLVAPSLRCRCSICSSACRMRRRASSSAIFL
Nucleotide Sequence ATGGGAAAACGCAGCGAAGCAAAGAACTACAGAGGGGACCCAGATCATCAAGGTCCTGCAGGCACTAGAGGCACCAAACAGGGTATGAAGGGAACTCCCTGCGCTCCGACGCGAGGGCACCACATGGGCCGCACCTGCTTGGTGGCACCCAGCTTGCGCTGCAGGTGTTCTATCTGCTCCTCTGCCTGCCGAATGCGCCGCAGGGCATCCTCATCCGCGATCTTCTTG
CircID chr16:30768892|30769222
ORF Type ORF5
Protein Length 51
Nucleotide Length 156
Protein Sequence MRRIRQAEEQIEHLQRKLGATKQVRPMWCPRVGAQGVPFIPCLVPLVPAGP
Nucleotide Sequence CTGCGGCGCATTCGGCAGGCAGAGGAGCAGATAGAACACCTGCAGCGCAAGCTGGGTGCCACCAAGCAGGTGCGGCCCATGTGGTGCCCTCGCGTCGGAGCGCAGGGAGTTCCCTTCATACCCTGTTTGGTGCCTCTAGTGCCTGCAGGACCTTGA
CircID chr16:30768892|30769222
ORF Type ORF6
Protein Length 38
Nucleotide Length 114
Protein Sequence MRFPMVPPQPSCPLPTFHLVSAHLLQEEEALLSEMDVT
Nucleotide Sequence CTGCGTTTTCCCATGGTTCCCCCACAGCCATCCTGTCCACTTCCCACGTTCCATCTTGTCTCTGCCCACTTGCTGCAGGAGGAGGAGGCTCTGCTCTCAGAGATGGATGTGACA
CircID chr16:30768892|30769222
ORF Type ORF7
Protein Length 52
Nucleotide Length 159
Protein Sequence MQDLDDLGPLCSSLLRCVFPWFPHSHPVHFPRSILSLPTCCRRRRLCSQRWM
Nucleotide Sequence CTGCAGGACCTTGATGATCTGGGTCCCCTCTGTAGTTCTTTGCTTCGCTGCGTTTTCCCATGGTTCCCCCACAGCCATCCTGTCCACTTCCCACGTTCCATCTTGTCTCTGCCCACTTGCTGCAGGAGGAGGAGGCTCTGCTCTCAGAGATGGATGTGA
CircID chr16:30768892|30769222
ORF Type ORF8
Protein Length 60
Nucleotide Length 180
Protein Sequence MFGASSACRTLMIWVPSVVLCFAAFSHGSPTAILSTSHVPSCLCPLAAGGGGSALRDGCD
Nucleotide Sequence CTGTTTGGTGCCTCTAGTGCCTGCAGGACCTTGATGATCTGGGTCCCCTCTGTAGTTCTTTGCTTCGCTGCGTTTTCCCATGGTTCCCCCACAGCCATCCTGTCCACTTCCCACGTTCCATCTTGTCTCTGCCCACTTGCTGCAGGAGGAGGAGGCTCTGCTCTCAGAGATGGATGTGAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab