CircRNA Information

General Information
circRNA Basic Information
CircID chr16:30947802|30948101
Strand -
CircType exon
Host Gene ENSG00000099364.15;
Algorism CIRI2;
Sequence AGCAATACCCCCTTGGGGGTCACCTCTCTGCTTCCCCCCTCCCCAGGCTTCAGTTCCTTCCCCCTGACCCTGACTCCTTGAACGTCACTGAAAACGGCAGCTATTGCAAGGAGTGGGGGCCGCGGGCAGCCGCTCTTCAGCTCGCGGCCCAGGGGAGTGGCGAGGGGCGCCCCAACCCCCTGCCCGCCTCTCCGCACAATACTTGAACATTCATCTGTACTGAAGTGTTACTTGAACCGGGGGAATCTCGGACCTGGGGGAGCCGGGGTGTGAGGGGACTGGACCAGCTTGGACTGAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:30947802|30948101 hsa-miR-22-5p 0 0 1
chr16:30947802|30948101 hsa-miR-22-3p 0 0 1
chr16:30947802|30948101 hsa-miR-26b-5p 0 0 1
chr16:30947802|30948101 hsa-miR-26b-3p 0 0 1
chr16:30947802|30948101 hsa-miR-210-5p 0 0 1
chr16:30947802|30948101 hsa-miR-210-3p 0 0 1
chr16:30947802|30948101 hsa-miR-137-5p 0 0 1
chr16:30947802|30948101 hsa-miR-137-3p 0 0 1
chr16:30947802|30948101 hsa-miR-141-5p 0 0 1
chr16:30947802|30948101 hsa-miR-141-3p 0 0 1
chr16:30947802|30948101 hsa-miR-200a-5p 0 0 1
chr16:30947802|30948101 hsa-miR-200a-3p 0 0 1
chr16:30947802|30948101 hsa-miR-625-5p 0 0 1
chr16:30947802|30948101 hsa-miR-625-3p 0 0 1
chr16:30947802|30948101 hsa-miR-661 0 0 1
chr16:30947802|30948101 hsa-miR-658 1 0 1
chr16:30947802|30948101 hsa-miR-802 0 0 1
chr16:30947802|30948101 hsa-miR-147b-5p 0 0 1
chr16:30947802|30948101 hsa-miR-147b-3p 0 0 1
chr16:30947802|30948101 hsa-miR-939-5p 0 0 1
chr16:30947802|30948101 hsa-miR-939-3p 0 0 1
chr16:30947802|30948101 hsa-miR-1228-5p 0 0 1
chr16:30947802|30948101 hsa-miR-1228-3p 0 0 1
chr16:30947802|30948101 hsa-miR-1297 0 0 1
chr16:30947802|30948101 hsa-miR-1252-5p 0 0 1
chr16:30947802|30948101 hsa-miR-1252-3p 0 0 1
chr16:30947802|30948101 hsa-miR-361-3p 0 1 1
chr16:30947802|30948101 hsa-miR-671-3p 0 1 1
chr16:30947802|30948101 hsa-miR-502-5p 0 1 1
chr16:30947802|30948101 hsa-miR-331-3p 0 1 1
chr16:30947802|30948101 hsa-miR-1207-5p 1 1 1
chr16:30947802|30948101 hsa-miR-483-3p 0 0 1
chr16:30947802|30948101 hsa-miR-455-3p 0 0 1
chr16:30947802|30948101 hsa-miR-342-3p 0 0 1
chr16:30947802|30948101 hsa-miR-26a 0 0 1
chr16:30947802|30948101 hsa-miR-220a 0 0 1
chr16:30947802|30948101 hsa-miR-663a 1 0 0
chr16:30947802|30948101 hsa-miR-762 1 0 0
chr16:30947802|30948101 hsa-miR-298 1 0 0
chr16:30947802|30948101 hsa-miR-940 1 0 0
chr16:30947802|30948101 hsa-miR-1182 1 0 0
chr16:30947802|30948101 hsa-miR-3137 1 0 0
chr16:30947802|30948101 hsa-miR-4270 1 1 0
chr16:30947802|30948101 hsa-miR-4271 0 1 0
chr16:30947802|30948101 hsa-miR-4286 0 1 0
chr16:30947802|30948101 hsa-miR-4292 0 1 0
chr16:30947802|30948101 hsa-miR-4465 1 1 0
chr16:30947802|30948101 hsa-miR-4496 1 0 0
chr16:30947802|30948101 hsa-miR-4651 1 0 0
chr16:30947802|30948101 hsa-miR-4688 1 0 0
chr16:30947802|30948101 hsa-miR-4706 1 0 0
chr16:30947802|30948101 hsa-miR-4739 1 1 0
chr16:30947802|30948101 hsa-miR-4767 1 0 0
chr16:30947802|30948101 hsa-miR-5190 1 0 0
chr16:30947802|30948101 hsa-miR-5698 0 1 0
chr16:30947802|30948101 hsa-miR-5787 1 0 0
chr16:30947802|30948101 hsa-miR-6088 1 0 0
chr16:30947802|30948101 hsa-miR-6127 1 0 0
chr16:30947802|30948101 hsa-miR-8089 1 1 0
chr16:30947802|30948101 hsa-miR-9899 0 1 0
chr16:30947802|30948101 hsa-miR-12115 1 0 0
chr16:30947802|30948101 hsa-miR-12120 1 1 0
chr16:30947802|30948101 hsa-miR-4433b-3p 1 0 0
chr16:30947802|30948101 hsa-miR-4665-3p 1 0 0
chr16:30947802|30948101 hsa-miR-6765-5p 0 1 0
chr16:30947802|30948101 hsa-miR-125b-1-3p 1 0 0
chr16:30947802|30948101 hsa-miR-3150a-3p 1 0 0
chr16:30947802|30948101 hsa-miR-6861-5p 1 0 0
chr16:30947802|30948101 hsa-miR-7106-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6825-5p 1 1 0
chr16:30947802|30948101 hsa-miR-6799-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6089 1 0 0
chr16:30947802|30948101 hsa-miR-4653-3p 1 0 0
chr16:30947802|30948101 hsa-miR-4709-3p 0 1 0
chr16:30947802|30948101 hsa-miR-6840-5p 1 1 0
chr16:30947802|30948101 hsa-miR-6721-5p 1 1 0
chr16:30947802|30948101 hsa-miR-423-3p 1 0 0
chr16:30947802|30948101 hsa-miR-4655-3p 0 1 0
chr16:30947802|30948101 hsa-miR-6732-5p 0 1 0
chr16:30947802|30948101 hsa-miR-6798-5p 1 1 0
chr16:30947802|30948101 hsa-miR-6788-3p 0 1 0
chr16:30947802|30948101 hsa-miR-5088-5p 1 0 0
chr16:30947802|30948101 hsa-miR-7109-5p 1 0 0
chr16:30947802|30948101 hsa-miR-1247-5p 1 0 0
chr16:30947802|30948101 hsa-miR-1229-5p 1 0 0
chr16:30947802|30948101 hsa-miR-4640-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6803-3p 0 1 0
chr16:30947802|30948101 hsa-miR-3679-3p 0 1 0
chr16:30947802|30948101 hsa-miR-7854-3p 0 1 0
chr16:30947802|30948101 hsa-miR-149-3p 1 1 0
chr16:30947802|30948101 hsa-miR-937-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6824-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6789-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6828-5p 0 1 0
chr16:30947802|30948101 hsa-miR-6769a-3p 0 1 0
chr16:30947802|30948101 hsa-miR-7112-5p 0 1 0
chr16:30947802|30948101 hsa-miR-423-5p 1 0 0
chr16:30947802|30948101 hsa-miR-4707-5p 0 1 0
chr16:30947802|30948101 hsa-miR-6814-5p 0 1 0
chr16:30947802|30948101 hsa-miR-503-3p 0 1 0
chr16:30947802|30948101 hsa-miR-6826-3p 0 1 0
chr16:30947802|30948101 hsa-miR-4749-3p 0 1 0
chr16:30947802|30948101 hsa-miR-6795-3p 0 1 0
chr16:30947802|30948101 hsa-miR-6777-3p 0 1 0
chr16:30947802|30948101 hsa-miR-6789-3p 0 1 0
chr16:30947802|30948101 hsa-miR-30d-3p 0 1 0
chr16:30947802|30948101 hsa-miR-4763-3p 1 1 0
chr16:30947802|30948101 hsa-miR-6787-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6816-5p 1 0 0
chr16:30947802|30948101 hsa-miR-1343-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6737-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6743-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6756-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6803-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6819-5p 1 0 0
chr16:30947802|30948101 hsa-miR-7107-5p 1 0 0
chr16:30947802|30948101 hsa-miR-1249-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6722-3p 0 1 0
chr16:30947802|30948101 hsa-miR-6763-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6774-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6779-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6780a-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6797-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6808-5p 0 1 0
chr16:30947802|30948101 hsa-miR-7111-5p 1 1 0
chr16:30947802|30948101 hsa-miR-4728-5p 1 1 0
chr16:30947802|30948101 hsa-miR-5196-5p 1 1 0
chr16:30947802|30948101 hsa-miR-6780b-5p 1 1 0
chr16:30947802|30948101 hsa-miR-1237-5p 1 0 0
chr16:30947802|30948101 hsa-miR-1909-3p 1 1 0
chr16:30947802|30948101 hsa-miR-328-5p 1 0 0
chr16:30947802|30948101 hsa-miR-4649-5p 1 0 0
chr16:30947802|30948101 hsa-miR-4725-3p 0 1 0
chr16:30947802|30948101 hsa-miR-6738-5p 1 0 0
chr16:30947802|30948101 hsa-miR-6777-5p 0 1 0
chr16:30947802|30948101 hsa-miR-6794-5p 1 1 0
chr16:30947802|30948101 hsa-miR-6795-5p 1 1 0
chr16:30947802|30948101 hsa-miR-6858-5p 1 1 0
chr16:30947802|30948101 hsa-miR-6883-5p 1 1 0
chr16:30947802|30948101 hsa-miR-6887-5p 1 1 0
chr16:30947802|30948101 hsa-miR-1914-3p 1 0 0
chr16:30947802|30948101 hsa-miR-4700-5p 0 1 0
chr16:30947802|30948101 hsa-miR-4646-5p 1 0 0
chr16:30947802|30948101 hsa-miR-4747-5p 0 1 0
chr16:30947802|30948101 hsa-miR-6891-5p 1 0 0
chr16:30947802|30948101 hsa-miR-4716-3p 1 1 0
chr16:30947802|30948101 hsa-miR-6785-5p 1 0 0
chr16:30947802|30948101 hsa-miR-4667-5p 1 1 0
chr16:30947802|30948101 hsa-miR-10398-5p 0 1 0
chr16:30947802|30948101 hsa-miR-6791-5p 1 1 0
chr16:30947802|30948101 hsa-miR-10401-3p 0 1 0
chr16:30947802|30948101 hsa-miR-6810-3p 1 0 0
chr16:30947802|30948101 hsa-miR-26a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:30947802|30948101
ORF Type ORF1
Protein Length 61
Nucleotide Length 186
Protein Sequence MKTAAIARSGGRGQPLFSSRPRGVARGAPTPCPPLRTILEHSSVLKCYLNRGNLGPGGAGV
Nucleotide Sequence CTGAAAACGGCAGCTATTGCAAGGAGTGGGGGCCGCGGGCAGCCGCTCTTCAGCTCGCGGCCCAGGGGAGTGGCGAGGGGCGCCCCAACCCCCTGCCCGCCTCTCCGCACAATACTTGAACATTCATCTGTACTGAAGTGTTACTTGAACCGGGGGAATCTCGGACCTGGGGGAGCCGGGGTGTGA
CircID chr16:30947802|30948101
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MQGVGAAGSRSSARGPGEWRGAPQPPARLSAQYLNIHLY
Nucleotide Sequence TTGCAAGGAGTGGGGGCCGCGGGCAGCCGCTCTTCAGCTCGCGGCCCAGGGGAGTGGCGAGGGGCGCCCCAACCCCCTGCCCGCCTCTCCGCACAATACTTGAACATTCATCTGTACTGA
CircID chr16:30947802|30948101
ORF Type ORF3
Protein Length 42
Nucleotide Length 129
Protein Sequence MNVTENGSYCKEWGPRAAALQLAAQGSGEGRPNPLPASPHNT
Nucleotide Sequence TTGAACGTCACTGAAAACGGCAGCTATTGCAAGGAGTGGGGGCCGCGGGCAGCCGCTCTTCAGCTCGCGGCCCAGGGGAGTGGCGAGGGGCGCCCCAACCCCCTGCCCGCCTCTCCGCACAATACTTGA
CircID chr16:30947802|30948101
ORF Type ORF4
Protein Length 41
Nucleotide Length 126
Protein Sequence MFKYCAERRAGGWGAPRHSPGPRAEERLPAAPTPCNSCRFQ
Nucleotide Sequence ATGTTCAAGTATTGTGCGGAGAGGCGGGCAGGGGGTTGGGGCGCCCCTCGCCACTCCCCTGGGCCGCGAGCTGAAGAGCGGCTGCCCGCGGCCCCCACTCCTTGCAATAGCTGCCGTTTTCAGTGA
CircID chr16:30947802|30948101
ORF Type ORF5
Protein Length 50
Nucleotide Length 150
Protein Sequence MGRELKSGCPRPPLLAIAAVFSDVQGVRVRGKELKPGEGGSREVTPKGVL
Nucleotide Sequence CTGGGCCGCGAGCTGAAGAGCGGCTGCCCGCGGCCCCCACTCCTTGCAATAGCTGCCGTTTTCAGTGACGTTCAAGGAGTCAGGGTCAGGGGGAAGGAACTGAAGCCTGGGGAGGGGGGAAGCAGAGAGGTGACCCCCAAGGGGGTATTG
CircID chr16:30947802|30948101
ORF Type ORF6
Protein Length 25
Nucleotide Length 78
Protein Sequence MNVQVLCGEAGRGLGRPSPLPWAAS
Nucleotide Sequence ATGAATGTTCAAGTATTGTGCGGAGAGGCGGGCAGGGGGTTGGGGCGCCCCTCGCCACTCCCCTGGGCCGCGAGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab