CircRNA Information

General Information
circRNA Basic Information
CircID chr16:31076890|31077155
Strand -
CircType exon
Host Gene ENSG00000167395.10;
Algorism CIRI2;
Sequence CCTCCACTAACTCTGCCAGAGCCCCTCCTCTCCCCATCCCAGCCAGCAGCCTTCTTAGCAACTTGGAACAGTATCTGGCTGAATCAGTAGTGAACTTCACAGGGGGCCAGGAGCCCACCCAGTCCCCTCCTGCTGAGGAGGAGCGGCGGTACAAATGTAGTCAGTGTGGCAAGACCTACAAGCACGCCGGGAGCCTCACCAACCACCGCCAGAGCCACACGCTGGGCATCTACCCCTGTGCCATCTGTTTCAAGGAGTTCTCTAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:31076890|31077155 hsa-miR-183-5p 0 0 1
chr16:31076890|31077155 hsa-miR-183-3p 0 0 1
chr16:31076890|31077155 hsa-miR-214-5p 0 0 1
chr16:31076890|31077155 hsa-miR-214-3p 0 0 1
chr16:31076890|31077155 hsa-miR-146a-5p 0 0 1
chr16:31076890|31077155 hsa-miR-146a-3p 0 0 1
chr16:31076890|31077155 hsa-miR-431-5p 0 0 1
chr16:31076890|31077155 hsa-miR-431-3p 0 0 1
chr16:31076890|31077155 hsa-miR-452-5p 0 0 1
chr16:31076890|31077155 hsa-miR-452-3p 0 0 1
chr16:31076890|31077155 hsa-miR-494-5p 0 0 1
chr16:31076890|31077155 hsa-miR-494-3p 0 0 1
chr16:31076890|31077155 hsa-miR-636 1 0 1
chr16:31076890|31077155 hsa-miR-541-5p 0 0 1
chr16:31076890|31077155 hsa-miR-541-3p 0 0 1
chr16:31076890|31077155 hsa-miR-760 1 0 1
chr16:31076890|31077155 hsa-miR-922 0 0 1
chr16:31076890|31077155 hsa-miR-939-5p 0 0 1
chr16:31076890|31077155 hsa-miR-939-3p 0 0 1
chr16:31076890|31077155 hsa-miR-1293 0 0 1
chr16:31076890|31077155 hsa-miR-1303 1 0 1
chr16:31076890|31077155 hsa-miR-485-5p 0 0 1
chr16:31076890|31077155 hsa-miR-423-5p 0 0 1
chr16:31076890|31077155 hsa-miR-654-5p 0 0 1
chr16:31076890|31077155 hsa-miR-876-3p 0 0 1
chr16:31076890|31077155 hsa-miR-146b-5p 0 0 1
chr16:31076890|31077155 hsa-miR-220c 0 0 1
chr16:31076890|31077155 hsa-miR-644 0 0 1
chr16:31076890|31077155 hsa-miR-608 1 0 0
chr16:31076890|31077155 hsa-miR-663a 1 0 0
chr16:31076890|31077155 hsa-miR-658 1 0 0
chr16:31076890|31077155 hsa-miR-762 1 0 0
chr16:31076890|31077155 hsa-miR-1294 1 0 0
chr16:31076890|31077155 hsa-miR-3132 1 0 0
chr16:31076890|31077155 hsa-miR-3175 1 0 0
chr16:31076890|31077155 hsa-miR-3185 1 0 0
chr16:31076890|31077155 hsa-miR-3188 1 0 0
chr16:31076890|31077155 hsa-miR-4316 1 0 0
chr16:31076890|31077155 hsa-miR-3911 1 0 0
chr16:31076890|31077155 hsa-miR-4450 1 0 0
chr16:31076890|31077155 hsa-miR-4467 1 0 0
chr16:31076890|31077155 hsa-miR-4488 1 0 0
chr16:31076890|31077155 hsa-miR-1587 1 0 0
chr16:31076890|31077155 hsa-miR-4651 1 0 0
chr16:31076890|31077155 hsa-miR-4688 1 0 0
chr16:31076890|31077155 hsa-miR-4689 1 0 0
chr16:31076890|31077155 hsa-miR-4706 1 0 0
chr16:31076890|31077155 hsa-miR-4710 1 0 0
chr16:31076890|31077155 hsa-miR-4739 1 0 0
chr16:31076890|31077155 hsa-miR-5787 1 0 0
chr16:31076890|31077155 hsa-miR-8075 1 0 0
chr16:31076890|31077155 hsa-miR-8085 1 0 0
chr16:31076890|31077155 hsa-miR-6734-5p 1 0 0
chr16:31076890|31077155 hsa-miR-3150a-3p 1 0 0
chr16:31076890|31077155 hsa-miR-7106-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6825-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6894-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6857-5p 1 0 0
chr16:31076890|31077155 hsa-miR-4687-3p 1 0 0
chr16:31076890|31077155 hsa-miR-6728-5p 1 0 0
chr16:31076890|31077155 hsa-miR-3622a-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6880-5p 1 0 0
chr16:31076890|31077155 hsa-miR-4722-5p 1 0 0
chr16:31076890|31077155 hsa-miR-3064-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6890-5p 1 0 0
chr16:31076890|31077155 hsa-miR-4474-3p 1 0 0
chr16:31076890|31077155 hsa-miR-6721-5p 1 0 0
chr16:31076890|31077155 hsa-miR-23b-5p 1 0 0
chr16:31076890|31077155 hsa-miR-197-5p 1 0 0
chr16:31076890|31077155 hsa-miR-8069 1 0 0
chr16:31076890|31077155 hsa-miR-7108-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6748-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6829-5p 1 0 0
chr16:31076890|31077155 hsa-miR-2467-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6782-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6810-5p 1 0 0
chr16:31076890|31077155 hsa-miR-7855-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6735-3p 1 0 0
chr16:31076890|31077155 hsa-miR-6786-5p 1 0 0
chr16:31076890|31077155 hsa-miR-7109-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6740-5p 1 0 0
chr16:31076890|31077155 hsa-miR-1908-5p 1 0 0
chr16:31076890|31077155 hsa-miR-296-3p 1 0 0
chr16:31076890|31077155 hsa-miR-92b-5p 1 0 0
chr16:31076890|31077155 hsa-miR-877-5p 1 0 0
chr16:31076890|31077155 hsa-miR-149-3p 1 0 0
chr16:31076890|31077155 hsa-miR-6830-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6824-5p 1 0 0
chr16:31076890|31077155 hsa-miR-4776-5p 1 0 0
chr16:31076890|31077155 hsa-miR-4707-5p 1 0 0
chr16:31076890|31077155 hsa-miR-1180-3p 1 0 0
chr16:31076890|31077155 hsa-miR-1307-3p 1 0 0
chr16:31076890|31077155 hsa-miR-4639-5p 1 0 0
chr16:31076890|31077155 hsa-miR-10400-5p 1 0 0
chr16:31076890|31077155 hsa-miR-1207-5p 1 0 0
chr16:31076890|31077155 hsa-miR-1233-5p 1 0 0
chr16:31076890|31077155 hsa-miR-4763-3p 1 0 0
chr16:31076890|31077155 hsa-miR-6769b-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6778-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6787-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6812-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6816-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6870-5p 1 0 0
chr16:31076890|31077155 hsa-miR-1343-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6756-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6769a-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6803-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6813-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6851-5p 1 0 0
chr16:31076890|31077155 hsa-miR-11181-3p 1 0 0
chr16:31076890|31077155 hsa-miR-1249-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6751-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6763-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6779-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6780a-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6797-5p 1 0 0
chr16:31076890|31077155 hsa-miR-7111-5p 1 0 0
chr16:31076890|31077155 hsa-miR-3620-5p 1 0 0
chr16:31076890|31077155 hsa-miR-4728-5p 1 0 0
chr16:31076890|31077155 hsa-miR-5196-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6780b-5p 1 0 0
chr16:31076890|31077155 hsa-miR-10396b-5p 1 0 0
chr16:31076890|31077155 hsa-miR-1909-3p 1 0 0
chr16:31076890|31077155 hsa-miR-328-5p 1 0 0
chr16:31076890|31077155 hsa-miR-4632-5p 1 0 0
chr16:31076890|31077155 hsa-miR-4649-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6729-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6795-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6846-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6848-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6858-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6883-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6887-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6885-5p 1 0 0
chr16:31076890|31077155 hsa-miR-3940-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6731-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6856-5p 1 0 0
chr16:31076890|31077155 hsa-miR-1914-3p 1 0 0
chr16:31076890|31077155 hsa-miR-4646-5p 1 0 0
chr16:31076890|31077155 hsa-miR-4747-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6891-5p 1 0 0
chr16:31076890|31077155 hsa-miR-6785-5p 1 0 0
chr16:31076890|31077155 hsa-miR-4667-5p 1 0 0
chr16:31076890|31077155 hsa-miR-10400-3p 1 0 0
chr16:31076890|31077155 hsa-miR-6859-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:31076890|31077155
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MPEPLLSPSQPAAFLATWNSIWLNQ
Nucleotide Sequence CTGCCAGAGCCCCTCCTCTCCCCATCCCAGCCAGCAGCCTTCTTAGCAACTTGGAACAGTATCTGGCTGAATCAGTAG
CircID chr16:31076890|31077155
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MLRRSGGTNVVSVARPTSTPGASPTTARATRWASTPVPSVSRSSL
Nucleotide Sequence CTGCTGAGGAGGAGCGGCGGTACAAATGTAGTCAGTGTGGCAAGACCTACAAGCACGCCGGGAGCCTCACCAACCACCGCCAGAGCCACACGCTGGGCATCTACCCCTGTGCCATCTGTTTCAAGGAGTTCTCTA
CircID chr16:31076890|31077155
ORF Type ORF3
Protein Length 68
Nucleotide Length 204
Protein Sequence MEQYLAESVVNFTGGQEPTQSPPAEEERRYKCSQCGKTYKHAGSLTNHRQSHTLGIYPCAICFKEFSN
Nucleotide Sequence TTGGAACAGTATCTGGCTGAATCAGTAGTGAACTTCACAGGGGGCCAGGAGCCCACCCAGTCCCCTCCTGCTGAGGAGGAGCGGCGGTACAAATGTAGTCAGTGTGGCAAGACCTACAAGCACGCCGGGAGCCTCACCAACCACCGCCAGAGCCACACGCTGGGCATCTACCCCTGTGCCATCTGTTTCAAGGAGTTCTCTAAC
CircID chr16:31076890|31077155
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MAVVGEAPGVLVGLATLTTFVPPLLLSRRGLGGLLAPCEVHY
Nucleotide Sequence CTGGCGGTGGTTGGTGAGGCTCCCGGCGTGCTTGTAGGTCTTGCCACACTGACTACATTTGTACCGCCGCTCCTCCTCAGCAGGAGGGGACTGGGTGGGCTCCTGGCCCCCTGTGAAGTTCACTACTGA
CircID chr16:31076890|31077155
ORF Type ORF5
Protein Length 51
Nucleotide Length 153
Protein Sequence MYRRSSSAGGDWVGSWPPVKFTTDSARYCSKLLRRLLAGMGRGGALAELVE
Nucleotide Sequence TTGTACCGCCGCTCCTCCTCAGCAGGAGGGGACTGGGTGGGCTCCTGGCCCCCTGTGAAGTTCACTACTGATTCAGCCAGATACTGTTCCAAGTTGCTAAGAAGGCTGCTGGCTGGGATGGGGAGAGGAGGGGCTCTGGCAGAGTTAGTGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab