CircRNA Information

General Information
circRNA Basic Information
CircID chr16:31078788|31079059
Strand -
CircType exon
Host Gene ENSG00000167395.10;
Algorism CIRI2;
Sequence ACATGCTCTGACTGTGGGCATTCTTTCCCCCATGCCACTGGCCTGCTGAGCCACAGGCCCTGCCACCCACCAGGCATCTATCAGTGCTCCCTCTGCCCGAAGGAGTTTGACTCTCTGCCTGCCCTCCGCAGCCACTTCCAGAACCATAGGCCTGGGGAGGCGACCTCAGCACAGCCTTTCCTCTGCTGCCTCTGTGGCATGATCTTCCCTGGGCGGGCTGGCTACAGGCTTCACCGGCGCCAGGCCCACAGCTCCTCTGGCATGACTGAGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:31078788|31079059 hsa-miR-214-5p 0 0 1
chr16:31078788|31079059 hsa-miR-214-3p 0 0 1
chr16:31078788|31079059 hsa-miR-186-5p 0 0 1
chr16:31078788|31079059 hsa-miR-186-3p 0 0 1
chr16:31078788|31079059 hsa-miR-575 0 0 1
chr16:31078788|31079059 hsa-miR-584-5p 0 0 1
chr16:31078788|31079059 hsa-miR-584-3p 0 0 1
chr16:31078788|31079059 hsa-miR-604 1 1 1
chr16:31078788|31079059 hsa-miR-625-5p 0 0 1
chr16:31078788|31079059 hsa-miR-625-3p 0 0 1
chr16:31078788|31079059 hsa-miR-647 0 0 1
chr16:31078788|31079059 hsa-miR-661 1 0 1
chr16:31078788|31079059 hsa-miR-658 1 1 1
chr16:31078788|31079059 hsa-miR-541-5p 0 0 1
chr16:31078788|31079059 hsa-miR-541-3p 0 0 1
chr16:31078788|31079059 hsa-miR-708-5p 0 0 1
chr16:31078788|31079059 hsa-miR-708-3p 0 0 1
chr16:31078788|31079059 hsa-miR-922 0 1 1
chr16:31078788|31079059 hsa-miR-1293 0 0 1
chr16:31078788|31079059 hsa-miR-1299 1 1 1
chr16:31078788|31079059 hsa-miR-1275 0 1 1
chr16:31078788|31079059 hsa-miR-1281 0 0 1
chr16:31078788|31079059 hsa-miR-1827 0 1 1
chr16:31078788|31079059 hsa-miR-654-5p 0 0 1
chr16:31078788|31079059 hsa-miR-566 0 0 1
chr16:31078788|31079059 hsa-miR-28-5p 0 0 1
chr16:31078788|31079059 hsa-miR-875-3p 0 0 1
chr16:31078788|31079059 hsa-miR-1207-5p 1 0 1
chr16:31078788|31079059 hsa-miR-516b 0 0 1
chr16:31078788|31079059 hsa-miR-1254 0 0 1
chr16:31078788|31079059 hsa-miR-24 0 0 1
chr16:31078788|31079059 hsa-miR-365 0 0 1
chr16:31078788|31079059 hsa-miR-638 1 0 0
chr16:31078788|31079059 hsa-miR-663a 1 0 0
chr16:31078788|31079059 hsa-miR-762 1 0 0
chr16:31078788|31079059 hsa-miR-298 1 0 0
chr16:31078788|31079059 hsa-miR-760 1 0 0
chr16:31078788|31079059 hsa-miR-940 1 0 0
chr16:31078788|31079059 hsa-miR-1268a 1 0 0
chr16:31078788|31079059 hsa-miR-2110 1 0 0
chr16:31078788|31079059 hsa-miR-2861 1 1 0
chr16:31078788|31079059 hsa-miR-3125 0 1 0
chr16:31078788|31079059 hsa-miR-3132 1 1 0
chr16:31078788|31079059 hsa-miR-3137 0 1 0
chr16:31078788|31079059 hsa-miR-3147 1 0 0
chr16:31078788|31079059 hsa-miR-4322 1 1 0
chr16:31078788|31079059 hsa-miR-4265 0 1 0
chr16:31078788|31079059 hsa-miR-4264 0 1 0
chr16:31078788|31079059 hsa-miR-4270 1 0 0
chr16:31078788|31079059 hsa-miR-3714 1 0 0
chr16:31078788|31079059 hsa-miR-3916 1 1 0
chr16:31078788|31079059 hsa-miR-3945 1 0 0
chr16:31078788|31079059 hsa-miR-1268b 1 0 0
chr16:31078788|31079059 hsa-miR-4487 1 0 0
chr16:31078788|31079059 hsa-miR-4510 0 1 0
chr16:31078788|31079059 hsa-miR-4518 1 0 0
chr16:31078788|31079059 hsa-miR-3960 1 0 0
chr16:31078788|31079059 hsa-miR-3972 1 0 0
chr16:31078788|31079059 hsa-miR-4647 1 0 0
chr16:31078788|31079059 hsa-miR-4656 1 0 0
chr16:31078788|31079059 hsa-miR-4673 0 1 0
chr16:31078788|31079059 hsa-miR-4688 1 1 0
chr16:31078788|31079059 hsa-miR-4734 1 1 0
chr16:31078788|31079059 hsa-miR-4739 1 0 0
chr16:31078788|31079059 hsa-miR-4754 1 0 0
chr16:31078788|31079059 hsa-miR-5787 1 0 0
chr16:31078788|31079059 hsa-miR-6081 1 0 0
chr16:31078788|31079059 hsa-miR-6090 1 0 0
chr16:31078788|31079059 hsa-miR-6127 1 0 0
chr16:31078788|31079059 hsa-miR-6132 0 1 0
chr16:31078788|31079059 hsa-miR-6860 1 0 0
chr16:31078788|31079059 hsa-miR-7150 1 1 0
chr16:31078788|31079059 hsa-miR-7974 0 1 0
chr16:31078788|31079059 hsa-miR-8072 1 0 0
chr16:31078788|31079059 hsa-miR-9500 0 1 0
chr16:31078788|31079059 hsa-miR-9899 1 0 0
chr16:31078788|31079059 hsa-miR-12115 1 0 0
chr16:31078788|31079059 hsa-miR-12122 0 1 0
chr16:31078788|31079059 hsa-miR-134-3p 1 1 0
chr16:31078788|31079059 hsa-miR-6836-3p 0 1 0
chr16:31078788|31079059 hsa-miR-218-2-3p 1 0 0
chr16:31078788|31079059 hsa-miR-7106-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6825-5p 1 0 0
chr16:31078788|31079059 hsa-miR-1972 0 1 0
chr16:31078788|31079059 hsa-miR-4687-3p 1 0 0
chr16:31078788|31079059 hsa-miR-27a-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6799-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6510-5p 1 0 0
chr16:31078788|31079059 hsa-miR-766-5p 1 0 0
chr16:31078788|31079059 hsa-miR-7114-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6089 1 0 0
chr16:31078788|31079059 hsa-miR-6873-5p 0 1 0
chr16:31078788|31079059 hsa-miR-6880-5p 1 0 0
chr16:31078788|31079059 hsa-miR-7160-5p 0 1 0
chr16:31078788|31079059 hsa-miR-6820-5p 1 0 0
chr16:31078788|31079059 hsa-miR-3622b-5p 1 1 0
chr16:31078788|31079059 hsa-miR-6759-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6721-5p 1 1 0
chr16:31078788|31079059 hsa-miR-197-5p 1 1 0
chr16:31078788|31079059 hsa-miR-7108-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6748-5p 0 1 0
chr16:31078788|31079059 hsa-miR-6796-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6827-5p 1 0 0
chr16:31078788|31079059 hsa-miR-2467-3p 1 1 0
chr16:31078788|31079059 hsa-miR-3194-5p 0 1 0
chr16:31078788|31079059 hsa-miR-6735-3p 1 1 0
chr16:31078788|31079059 hsa-miR-6858-3p 0 1 0
chr16:31078788|31079059 hsa-miR-7109-5p 1 0 0
chr16:31078788|31079059 hsa-miR-1226-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6853-5p 1 0 0
chr16:31078788|31079059 hsa-miR-4707-3p 0 1 0
chr16:31078788|31079059 hsa-miR-4640-5p 1 0 0
chr16:31078788|31079059 hsa-miR-885-3p 1 0 0
chr16:31078788|31079059 hsa-miR-6771-5p 1 0 0
chr16:31078788|31079059 hsa-miR-4690-5p 1 1 0
chr16:31078788|31079059 hsa-let-7b-5p 1 0 0
chr16:31078788|31079059 hsa-miR-3677-3p 1 0 0
chr16:31078788|31079059 hsa-miR-6749-5p 1 1 0
chr16:31078788|31079059 hsa-miR-6847-5p 0 1 0
chr16:31078788|31079059 hsa-miR-7112-5p 1 1 0
chr16:31078788|31079059 hsa-miR-7160-3p 1 0 0
chr16:31078788|31079059 hsa-let-7i-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6499-5p 1 0 0
chr16:31078788|31079059 hsa-miR-1910-5p 1 0 0
chr16:31078788|31079059 hsa-miR-361-3p 0 1 0
chr16:31078788|31079059 hsa-miR-597-3p 1 0 0
chr16:31078788|31079059 hsa-miR-744-5p 1 0 0
chr16:31078788|31079059 hsa-miR-4750-5p 1 1 0
chr16:31078788|31079059 hsa-miR-2355-5p 0 1 0
chr16:31078788|31079059 hsa-miR-371b-3p 0 1 0
chr16:31078788|31079059 hsa-miR-431-3p 0 1 0
chr16:31078788|31079059 hsa-miR-10400-5p 1 0 0
chr16:31078788|31079059 hsa-miR-1233-5p 1 0 0
chr16:31078788|31079059 hsa-miR-4763-3p 1 1 0
chr16:31078788|31079059 hsa-miR-6769b-5p 1 1 0
chr16:31078788|31079059 hsa-miR-6778-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6865-5p 1 1 0
chr16:31078788|31079059 hsa-miR-6775-5p 1 0 0
chr16:31078788|31079059 hsa-miR-1343-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6726-5p 1 1 0
chr16:31078788|31079059 hsa-miR-6752-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6756-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6769a-5p 0 1 0
chr16:31078788|31079059 hsa-miR-6815-5p 1 1 0
chr16:31078788|31079059 hsa-miR-6819-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6851-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6722-3p 1 0 0
chr16:31078788|31079059 hsa-miR-6774-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6779-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6879-5p 0 1 0
chr16:31078788|31079059 hsa-miR-6836-5p 1 1 0
chr16:31078788|31079059 hsa-miR-10396b-5p 1 0 0
chr16:31078788|31079059 hsa-miR-1237-5p 1 0 0
chr16:31078788|31079059 hsa-miR-1909-3p 1 0 0
chr16:31078788|31079059 hsa-miR-328-5p 1 1 0
chr16:31078788|31079059 hsa-miR-4632-5p 1 0 0
chr16:31078788|31079059 hsa-miR-4685-5p 1 0 0
chr16:31078788|31079059 hsa-miR-4726-5p 1 0 0
chr16:31078788|31079059 hsa-miR-4749-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6735-5p 1 1 0
chr16:31078788|31079059 hsa-miR-6848-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6858-5p 1 0 0
chr16:31078788|31079059 hsa-miR-4436b-3p 0 1 0
chr16:31078788|31079059 hsa-miR-4723-5p 1 0 0
chr16:31078788|31079059 hsa-miR-939-5p 1 1 0
chr16:31078788|31079059 hsa-miR-6511a-5p 0 1 0
chr16:31078788|31079059 hsa-miR-6511b-5p 0 1 0
chr16:31078788|31079059 hsa-miR-1271-3p 0 1 0
chr16:31078788|31079059 hsa-miR-5008-3p 0 1 0
chr16:31078788|31079059 hsa-miR-7843-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6736-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6785-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6529-5p 1 0 0
chr16:31078788|31079059 hsa-miR-6859-5p 0 1 0
chr16:31078788|31079059 hsa-miR-3619-5p 1 1 0
chr16:31078788|31079059 hsa-miR-6838-5p 0 1 0
chr16:31078788|31079059 hsa-miR-6733-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:31078788|31079059
ORF Type ORF1
Protein Length 76
Nucleotide Length 228
Protein Sequence MLSHRPCHPPGIYQCSLCPKEFDSLPALRSHFQNHRPGEATSAQPFLCCLCGMIFPGRAGYRLHRRQAHSSSGMTE
Nucleotide Sequence CTGCTGAGCCACAGGCCCTGCCACCCACCAGGCATCTATCAGTGCTCCCTCTGCCCGAAGGAGTTTGACTCTCTGCCTGCCCTCCGCAGCCACTTCCAGAACCATAGGCCTGGGGAGGCGACCTCAGCACAGCCTTTCCTCTGCTGCCTCTGTGGCATGATCTTCCCTGGGCGGGCTGGCTACAGGCTTCACCGGCGCCAGGCCCACAGCTCCTCTGGCATGACTGAG
CircID chr16:31078788|31079059
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MTLCLPSAATSRTIGLGRRPQHSLSSAASVA
Nucleotide Sequence TTGACTCTCTGCCTGCCCTCCGCAGCCACTTCCAGAACCATAGGCCTGGGGAGGCGACCTCAGCACAGCCTTTCCTCTGCTGCCTCTGTGGCATGA
CircID chr16:31078788|31079059
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MWAFFPPCHWPAEPQALPPTRHLSVLPLPEGV
Nucleotide Sequence CTGTGGGCATTCTTTCCCCCATGCCACTGGCCTGCTGAGCCACAGGCCCTGCCACCCACCAGGCATCTATCAGTGCTCCCTCTGCCCGAAGGAGTTTGA
CircID chr16:31078788|31079059
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MLPLWHDLPWAGWLQASPAPGPQLLWHD
Nucleotide Sequence CTGCTGCCTCTGTGGCATGATCTTCCCTGGGCGGGCTGGCTACAGGCTTCACCGGCGCCAGGCCCACAGCTCCTCTGGCATGACTGA
CircID chr16:31078788|31079059
ORF Type ORF5
Protein Length 39
Nucleotide Length 120
Protein Sequence MPQRQQRKGCAEVASPGLWFWKWLRRAGRESNSFGQREH
Nucleotide Sequence ATGCCACAGAGGCAGCAGAGGAAAGGCTGTGCTGAGGTCGCCTCCCCAGGCCTATGGTTCTGGAAGTGGCTGCGGAGGGCAGGCAGAGAGTCAAACTCCTTCGGGCAGAGGGAGCACTGA
CircID chr16:31078788|31079059
ORF Type ORF6
Protein Length 25
Nucleotide Length 75
Protein Sequence MPGGWQGLWLSRPVAWGKECPQSEH
Nucleotide Sequence ATGCCTGGTGGGTGGCAGGGCCTGTGGCTCAGCAGGCCAGTGGCATGGGGGAAAGAATGCCCACAGTCAGAGCAT
CircID chr16:31078788|31079059
ORF Type ORF7
Protein Length 56
Nucleotide Length 168
Protein Sequence MRSPPQAYGSGSGCGGQAESQTPSGRGSTDRCLVGGRACGSAGQWHGGKNAHSQSM
Nucleotide Sequence CTGAGGTCGCCTCCCCAGGCCTATGGTTCTGGAAGTGGCTGCGGAGGGCAGGCAGAGAGTCAAACTCCTTCGGGCAGAGGGAGCACTGATAGATGCCTGGTGGGTGGCAGGGCCTGTGGCTCAGCAGGCCAGTGGCATGGGGGAAAGAATGCCCACAGTCAGAGCATG
CircID chr16:31078788|31079059
ORF Type ORF8
Protein Length 25
Nucleotide Length 78
Protein Sequence MAPVKPVASPPREDHATEAAEERLC
Nucleotide Sequence CTGGCGCCGGTGAAGCCTGTAGCCAGCCCGCCCAGGGAAGATCATGCCACAGAGGCAGCAGAGGAAAGGCTGTGCTGA
CircID chr16:31078788|31079059
ORF Type ORF9
Protein Length 49
Nucleotide Length 147
Protein Sequence MVLEVAAEGRQRVKLLRAEGALIDAWWVAGPVAQQASGMGERMPTVRAC
Nucleotide Sequence ATGGTTCTGGAAGTGGCTGCGGAGGGCAGGCAGAGAGTCAAACTCCTTCGGGCAGAGGGAGCACTGATAGATGCCTGGTGGGTGGCAGGGCCTGTGGCTCAGCAGGCCAGTGGCATGGGGGAAAGAATGCCCACAGTCAGAGCATGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab