CircRNA Information

General Information
circRNA Basic Information
CircID chr16:31187723|31188090
Strand +
CircType exon
Host Gene ENSG00000089280.17;
Algorism CIRI2;
Sequence TCCACACTTCAGCAAATGCTGCCTCCCCCAGCTCAGGCTGGGAAATGTCCTCAGCACAGGTGGCAGGGGAAACGGAGACCCATTAAAGTGAACAAACCAACTCAGCTTGGCCCGGTTCTCTCACCCGAGAGAAGAGAGATGGGCTCGCCACCAGCCATGCGATGTGCATCCATCCAGTTTCTCCCAACTTTACCACCAGACACTTAACCCTTGTGGAACAATTTTTAATTTCATCTTTAGAAACCATCCTTAAAACCGTGTTGTTTCCCCGAAACCACATGAAAATAAAAACCATACATAATAGCTATTGTATTTTTTAAGCATGTCCCAGGGAACAGACCAGAAATCTTATTTCCGTAATGCAGCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:31187723|31188090 hsa-miR-107 0 0 1
chr16:31187723|31188090 hsa-miR-375-5p 0 0 1
chr16:31187723|31188090 hsa-miR-375-3p 0 0 1
chr16:31187723|31188090 hsa-miR-558 0 0 1
chr16:31187723|31188090 hsa-miR-561-5p 0 0 1
chr16:31187723|31188090 hsa-miR-561-3p 0 0 1
chr16:31187723|31188090 hsa-miR-571 0 0 1
chr16:31187723|31188090 hsa-miR-573 0 0 1
chr16:31187723|31188090 hsa-miR-584-5p 0 0 1
chr16:31187723|31188090 hsa-miR-584-3p 0 0 1
chr16:31187723|31188090 hsa-miR-589-5p 0 0 1
chr16:31187723|31188090 hsa-miR-589-3p 0 0 1
chr16:31187723|31188090 hsa-miR-595 0 0 1
chr16:31187723|31188090 hsa-miR-625-5p 0 0 1
chr16:31187723|31188090 hsa-miR-625-3p 0 0 1
chr16:31187723|31188090 hsa-miR-637 0 0 1
chr16:31187723|31188090 hsa-miR-650 0 1 1
chr16:31187723|31188090 hsa-miR-942-5p 0 0 1
chr16:31187723|31188090 hsa-miR-942-3p 0 0 1
chr16:31187723|31188090 hsa-miR-1231 0 1 1
chr16:31187723|31188090 hsa-miR-1236-5p 0 0 1
chr16:31187723|31188090 hsa-miR-1236-3p 0 0 1
chr16:31187723|31188090 hsa-miR-1243 0 0 1
chr16:31187723|31188090 hsa-miR-1275 0 0 1
chr16:31187723|31188090 hsa-miR-1827 0 0 1
chr16:31187723|31188090 hsa-miR-1224-5p 0 0 1
chr16:31187723|31188090 hsa-miR-542-5p 0 0 1
chr16:31187723|31188090 hsa-miR-193a-5p 0 0 1
chr16:31187723|31188090 hsa-miR-331-3p 0 0 1
chr16:31187723|31188090 hsa-miR-876-3p 0 0 1
chr16:31187723|31188090 hsa-miR-338-5p 0 0 1
chr16:31187723|31188090 hsa-miR-628-5p 0 0 1
chr16:31187723|31188090 hsa-miR-576-5p 0 0 1
chr16:31187723|31188090 hsa-miR-1302 0 1 1
chr16:31187723|31188090 hsa-miR-548c-3p 0 0 1
chr16:31187723|31188090 hsa-miR-1274a 0 0 1
chr16:31187723|31188090 hsa-miR-323-5p 0 0 1
chr16:31187723|31188090 hsa-miR-103 0 0 1
chr16:31187723|31188090 hsa-miR-138 0 0 1
chr16:31187723|31188090 hsa-miR-219-1-3p 0 0 1
chr16:31187723|31188090 hsa-miR-608 1 0 0
chr16:31187723|31188090 hsa-miR-623 1 0 0
chr16:31187723|31188090 hsa-miR-762 0 1 0
chr16:31187723|31188090 hsa-miR-1202 1 0 0
chr16:31187723|31188090 hsa-miR-1976 1 0 0
chr16:31187723|31188090 hsa-miR-3147 1 0 0
chr16:31187723|31188090 hsa-miR-4292 0 1 0
chr16:31187723|31188090 hsa-miR-4457 0 1 0
chr16:31187723|31188090 hsa-miR-4486 1 0 0
chr16:31187723|31188090 hsa-miR-4537 1 0 0
chr16:31187723|31188090 hsa-miR-4658 1 0 0
chr16:31187723|31188090 hsa-miR-4669 1 0 0
chr16:31187723|31188090 hsa-miR-4739 1 0 0
chr16:31187723|31188090 hsa-miR-5087 0 1 0
chr16:31187723|31188090 hsa-miR-5194 1 0 0
chr16:31187723|31188090 hsa-miR-5698 1 1 0
chr16:31187723|31188090 hsa-miR-5705 0 1 0
chr16:31187723|31188090 hsa-miR-8077 1 1 0
chr16:31187723|31188090 hsa-miR-8089 1 0 0
chr16:31187723|31188090 hsa-miR-12128 1 0 0
chr16:31187723|31188090 hsa-miR-92a-1-5p 1 0 0
chr16:31187723|31188090 hsa-miR-323a-5p 1 0 0
chr16:31187723|31188090 hsa-miR-3150a-3p 1 0 0
chr16:31187723|31188090 hsa-miR-6861-5p 1 0 0
chr16:31187723|31188090 hsa-miR-6728-5p 1 0 0
chr16:31187723|31188090 hsa-miR-766-5p 1 0 0
chr16:31187723|31188090 hsa-miR-6757-5p 1 0 0
chr16:31187723|31188090 hsa-miR-6746-5p 1 0 0
chr16:31187723|31188090 hsa-miR-7160-5p 1 0 0
chr16:31187723|31188090 hsa-miR-6741-5p 1 0 0
chr16:31187723|31188090 hsa-miR-6762-3p 1 0 0
chr16:31187723|31188090 hsa-miR-6842-3p 0 1 0
chr16:31187723|31188090 hsa-miR-197-5p 1 0 0
chr16:31187723|31188090 hsa-miR-6873-3p 0 1 0
chr16:31187723|31188090 hsa-miR-1915-5p 1 0 0
chr16:31187723|31188090 hsa-miR-6760-5p 1 1 0
chr16:31187723|31188090 hsa-miR-6850-5p 1 0 0
chr16:31187723|31188090 hsa-miR-1226-5p 1 1 0
chr16:31187723|31188090 hsa-miR-4738-3p 1 1 0
chr16:31187723|31188090 hsa-miR-4640-5p 1 0 0
chr16:31187723|31188090 hsa-miR-4715-3p 0 1 0
chr16:31187723|31188090 hsa-miR-296-3p 1 0 0
chr16:31187723|31188090 hsa-miR-6749-5p 1 0 0
chr16:31187723|31188090 hsa-miR-4446-5p 1 0 0
chr16:31187723|31188090 hsa-miR-3925-5p 0 1 0
chr16:31187723|31188090 hsa-miR-6742-3p 1 0 0
chr16:31187723|31188090 hsa-miR-664b-5p 1 0 0
chr16:31187723|31188090 hsa-miR-1468-5p 0 1 0
chr16:31187723|31188090 hsa-miR-1249-5p 1 0 0
chr16:31187723|31188090 hsa-miR-6779-5p 1 1 0
chr16:31187723|31188090 hsa-miR-6788-5p 1 1 0
chr16:31187723|31188090 hsa-miR-7111-5p 0 1 0
chr16:31187723|31188090 hsa-miR-3689a-3p 1 0 0
chr16:31187723|31188090 hsa-miR-4649-5p 1 0 0
chr16:31187723|31188090 hsa-miR-4726-5p 1 0 0
chr16:31187723|31188090 hsa-miR-6831-5p 1 0 0
chr16:31187723|31188090 hsa-miR-6731-5p 1 0 0
chr16:31187723|31188090 hsa-miR-4665-5p 1 0 0
chr16:31187723|31188090 hsa-miR-324-3p 1 0 0
chr16:31187723|31188090 hsa-miR-6753-3p 0 1 0
chr16:31187723|31188090 hsa-miR-7107-3p 1 1 0
chr16:31187723|31188090 hsa-miR-6727-3p 0 1 0
chr16:31187723|31188090 hsa-miR-6801-3p 1 1 0
chr16:31187723|31188090 hsa-miR-6810-3p 1 1 0
chr16:31187723|31188090 hsa-miR-6817-5p 1 0 0
chr16:31187723|31188090 hsa-miR-6843-3p 0 1 0
chr16:31187723|31188090 hsa-miR-6764-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:31187723|31188090
ORF Type ORF1
Protein Length 63
Nucleotide Length 192
Protein Sequence MLPPPAQAGKCPQHRWQGKRRPIKVNKPTQLGPVLSPERREMGSPPAMRCASIQFLPTLPPDT
Nucleotide Sequence ATGCTGCCTCCCCCAGCTCAGGCTGGGAAATGTCCTCAGCACAGGTGGCAGGGGAAACGGAGACCCATTAAAGTGAACAAACCAACTCAGCTTGGCCCGGTTCTCTCACCCGAGAGAAGAGAGATGGGCTCGCCACCAGCCATGCGATGTGCATCCATCCAGTTTCTCCCAACTTTACCACCAGACACTTAA

CircID chr16:31187723|31188090
ORF Type ORF2
Protein Length 48
Nucleotide Length 147
Protein Sequence MARFSHPREERWARHQPCDVHPSSFSQLYHQTLNPCGTIFNFIFRNHP
Nucleotide Sequence TTGGCCCGGTTCTCTCACCCGAGAGAAGAGAGATGGGCTCGCCACCAGCCATGCGATGTGCATCCATCCAGTTTCTCCCAACTTTACCACCAGACACTTAACCCTTGTGGAACAATTTTTAATTTCATCTTTAGAAACCATCCTTAA

CircID chr16:31187723|31188090
ORF Type ORF3
Protein Length 52
Nucleotide Length 159
Protein Sequence MCIHPVSPNFTTRHLTLVEQFLISSLETILKTVLFPRNHMKIKTIHNSYCIF
Nucleotide Sequence ATGTGCATCCATCCAGTTTCTCCCAACTTTACCACCAGACACTTAACCCTTGTGGAACAATTTTTAATTTCATCTTTAGAAACCATCCTTAAAACCGTGTTGTTTCCCCGAAACCACATGAAAATAAAAACCATACATAATAGCTATTGTATTTTTTAA

CircID chr16:31187723|31188090
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MHYGNKISGLFPGTCLKNTIAIMYGFYFHVVSGKQHGFKDGF
Nucleotide Sequence CTGCATTACGGAAATAAGATTTCTGGTCTGTTCCCTGGGACATGCTTAAAAAATACAATAGCTATTATGTATGGTTTTTATTTTCATGTGGTTTCGGGGAAACAACACGGTTTTAAGGATGGTTTCTAA

CircID chr16:31187723|31188090
ORF Type ORF5
Protein Length 70
Nucleotide Length 213
Protein Sequence MVFIFMWFRGNNTVLRMVSKDEIKNCSTRVKCLVVKLGETGWMHIAWLVASPSLFSRVREPGQAELVCSL
Nucleotide Sequence ATGGTTTTTATTTTCATGTGGTTTCGGGGAAACAACACGGTTTTAAGGATGGTTTCTAAAGATGAAATTAAAAATTGTTCCACAAGGGTTAAGTGTCTGGTGGTAAAGTTGGGAGAAACTGGATGGATGCACATCGCATGGCTGGTGGCGAGCCCATCTCTCTTCTCTCGGGTGAGAGAACCGGGCCAAGCTGAGTTGGTTTGTTCACTTTAA

CircID chr16:31187723|31188090
ORF Type ORF6
Protein Length 35
Nucleotide Length 105
Protein Sequence MSWFVHFNGSPFPLPPVLRTFPSLSWGRQHLLKCG
Nucleotide Sequence CTGAGTTGGTTTGTTCACTTTAATGGGTCTCCGTTTCCCCTGCCACCTGTGCTGAGGACATTTCCCAGCCTGAGCTGGGGGAGGCAGCATTTGCTGAAGTGTGGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites