CircRNA Information

General Information
circRNA Basic Information
CircID chr16:31371485|31371772
Strand -
CircType exon
Host Gene ENSG00000140678.15;
Algorism CIRI2;
Sequence CTGCTTGGGAGCCGTGAGTCCCCTCCCCTCCAACCCAGGACACCCTGACCTCTGGAGTCCCCCATCCCAGGCCCCTGTCTCCCACCCTGCTCATTGTCCACCCAAGGAGTTCCTGTCTCAACGCCGTCCCTGCGACCGCCTACAGGTGACCTCCAAAGCTCTGTGACCTTGGACCTGGCCCTCGACCCTGGCCGCCTGAGTCCCCGTGCCACCTTCCAGGAAACAAAGAACCGGAGTCTGAGCCGAGTCCGAGTCCTCGGGCTGAAGGCACACTGTGAAAACTTCAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:31371485|31371772 hsa-miR-27a-5p 0 0 1
chr16:31371485|31371772 hsa-miR-27a-3p 0 0 1
chr16:31371485|31371772 hsa-miR-27b-5p 0 0 1
chr16:31371485|31371772 hsa-miR-27b-3p 0 0 1
chr16:31371485|31371772 hsa-miR-150-5p 0 0 1
chr16:31371485|31371772 hsa-miR-150-3p 0 0 1
chr16:31371485|31371772 hsa-miR-510-5p 0 0 1
chr16:31371485|31371772 hsa-miR-510-3p 0 0 1
chr16:31371485|31371772 hsa-miR-564 0 0 1
chr16:31371485|31371772 hsa-miR-573 0 0 1
chr16:31371485|31371772 hsa-miR-611 0 1 1
chr16:31371485|31371772 hsa-miR-625-5p 0 0 1
chr16:31371485|31371772 hsa-miR-625-3p 0 0 1
chr16:31371485|31371772 hsa-miR-648 0 0 1
chr16:31371485|31371772 hsa-miR-661 0 0 1
chr16:31371485|31371772 hsa-miR-873-5p 0 0 1
chr16:31371485|31371772 hsa-miR-873-3p 0 0 1
chr16:31371485|31371772 hsa-miR-1293 1 0 1
chr16:31371485|31371772 hsa-miR-1262 0 0 1
chr16:31371485|31371772 hsa-miR-1275 0 0 1
chr16:31371485|31371772 hsa-miR-525-5p 0 0 1
chr16:31371485|31371772 hsa-miR-508-5p 0 1 1
chr16:31371485|31371772 hsa-miR-671-3p 0 0 1
chr16:31371485|31371772 hsa-miR-513a-5p 0 0 1
chr16:31371485|31371772 hsa-miR-520a-5p 0 0 1
chr16:31371485|31371772 hsa-miR-128 0 0 1
chr16:31371485|31371772 hsa-miR-550 0 0 1
chr16:31371485|31371772 hsa-miR-24 0 0 1
chr16:31371485|31371772 hsa-miR-768-5p 0 0 1
chr16:31371485|31371772 hsa-miR-608 1 1 0
chr16:31371485|31371772 hsa-miR-612 1 0 0
chr16:31371485|31371772 hsa-miR-638 1 0 0
chr16:31371485|31371772 hsa-miR-762 1 0 0
chr16:31371485|31371772 hsa-miR-1183 1 0 0
chr16:31371485|31371772 hsa-miR-1268a 1 0 0
chr16:31371485|31371772 hsa-miR-1469 1 0 0
chr16:31371485|31371772 hsa-miR-2861 1 1 0
chr16:31371485|31371772 hsa-miR-3131 1 1 0
chr16:31371485|31371772 hsa-miR-3138 1 1 0
chr16:31371485|31371772 hsa-miR-3147 1 0 0
chr16:31371485|31371772 hsa-miR-4298 1 0 0
chr16:31371485|31371772 hsa-miR-4302 0 1 0
chr16:31371485|31371772 hsa-miR-4259 1 0 0
chr16:31371485|31371772 hsa-miR-4270 1 0 0
chr16:31371485|31371772 hsa-miR-4281 1 0 0
chr16:31371485|31371772 hsa-miR-3937 0 1 0
chr16:31371485|31371772 hsa-miR-1268b 1 0 0
chr16:31371485|31371772 hsa-miR-4448 1 0 0
chr16:31371485|31371772 hsa-miR-4449 1 0 0
chr16:31371485|31371772 hsa-miR-4488 1 0 0
chr16:31371485|31371772 hsa-miR-4489 1 0 0
chr16:31371485|31371772 hsa-miR-2392 1 0 0
chr16:31371485|31371772 hsa-miR-4507 0 1 0
chr16:31371485|31371772 hsa-miR-4533 1 0 0
chr16:31371485|31371772 hsa-miR-4534 1 0 0
chr16:31371485|31371772 hsa-miR-1587 1 0 0
chr16:31371485|31371772 hsa-miR-3960 1 0 0
chr16:31371485|31371772 hsa-miR-4651 1 0 0
chr16:31371485|31371772 hsa-miR-4656 1 0 0
chr16:31371485|31371772 hsa-miR-4669 1 0 0
chr16:31371485|31371772 hsa-miR-4688 1 0 0
chr16:31371485|31371772 hsa-miR-4706 1 0 0
chr16:31371485|31371772 hsa-miR-4721 1 0 0
chr16:31371485|31371772 hsa-miR-4739 1 0 0
chr16:31371485|31371772 hsa-miR-4741 1 0 0
chr16:31371485|31371772 hsa-miR-5192 1 0 0
chr16:31371485|31371772 hsa-miR-5572 1 0 0
chr16:31371485|31371772 hsa-miR-5787 1 0 0
chr16:31371485|31371772 hsa-miR-6132 1 0 0
chr16:31371485|31371772 hsa-miR-6745 1 1 0
chr16:31371485|31371772 hsa-miR-6860 1 0 0
chr16:31371485|31371772 hsa-miR-7150 1 0 0
chr16:31371485|31371772 hsa-miR-8052 1 0 0
chr16:31371485|31371772 hsa-miR-8085 1 0 0
chr16:31371485|31371772 hsa-miR-8089 1 0 0
chr16:31371485|31371772 hsa-miR-9900 0 1 0
chr16:31371485|31371772 hsa-miR-9985 0 1 0
chr16:31371485|31371772 hsa-miR-12128 0 1 0
chr16:31371485|31371772 hsa-miR-211-3p 0 1 0
chr16:31371485|31371772 hsa-miR-323a-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6747-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6765-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6825-5p 1 1 0
chr16:31371485|31371772 hsa-miR-6894-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6857-5p 1 0 0
chr16:31371485|31371772 hsa-miR-4687-3p 1 0 0
chr16:31371485|31371772 hsa-miR-6799-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6510-5p 1 1 0
chr16:31371485|31371772 hsa-miR-6728-5p 1 1 0
chr16:31371485|31371772 hsa-miR-8071 1 1 0
chr16:31371485|31371772 hsa-miR-139-3p 1 1 0
chr16:31371485|31371772 hsa-miR-3622a-5p 1 1 0
chr16:31371485|31371772 hsa-miR-7851-3p 1 0 0
chr16:31371485|31371772 hsa-miR-5187-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6515-5p 0 1 0
chr16:31371485|31371772 hsa-miR-6089 1 0 0
chr16:31371485|31371772 hsa-miR-6757-5p 1 1 0
chr16:31371485|31371772 hsa-miR-6880-5p 1 0 0
chr16:31371485|31371772 hsa-miR-7847-3p 1 0 0
chr16:31371485|31371772 hsa-miR-4695-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6730-5p 1 0 0
chr16:31371485|31371772 hsa-miR-7154-3p 1 0 0
chr16:31371485|31371772 hsa-miR-6741-5p 1 0 0
chr16:31371485|31371772 hsa-miR-3622b-5p 1 1 0
chr16:31371485|31371772 hsa-miR-6806-5p 1 0 0
chr16:31371485|31371772 hsa-miR-7845-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6748-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6772-5p 1 0 0
chr16:31371485|31371772 hsa-miR-3190-3p 1 0 0
chr16:31371485|31371772 hsa-miR-6827-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6798-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6782-5p 1 1 0
chr16:31371485|31371772 hsa-miR-6810-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6786-5p 1 0 0
chr16:31371485|31371772 hsa-miR-5088-5p 1 0 0
chr16:31371485|31371772 hsa-miR-7109-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6853-5p 1 0 0
chr16:31371485|31371772 hsa-miR-3944-3p 1 0 0
chr16:31371485|31371772 hsa-miR-4640-5p 1 0 0
chr16:31371485|31371772 hsa-miR-1908-5p 1 0 0
chr16:31371485|31371772 hsa-miR-1228-5p 1 0 0
chr16:31371485|31371772 hsa-miR-296-3p 1 1 0
chr16:31371485|31371772 hsa-miR-6771-5p 1 0 0
chr16:31371485|31371772 hsa-miR-4690-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6823-5p 1 0 0
chr16:31371485|31371772 hsa-miR-92b-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6749-5p 1 1 0
chr16:31371485|31371772 hsa-miR-3648 1 0 0
chr16:31371485|31371772 hsa-miR-149-3p 1 0 0
chr16:31371485|31371772 hsa-miR-6824-5p 1 0 0
chr16:31371485|31371772 hsa-miR-3162-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6742-3p 0 1 0
chr16:31371485|31371772 hsa-miR-6781-5p 1 0 0
chr16:31371485|31371772 hsa-miR-3189-3p 1 1 0
chr16:31371485|31371772 hsa-miR-6895-5p 1 1 0
chr16:31371485|31371772 hsa-miR-3191-3p 1 0 0
chr16:31371485|31371772 hsa-miR-4652-5p 0 1 0
chr16:31371485|31371772 hsa-miR-4750-5p 1 1 0
chr16:31371485|31371772 hsa-miR-216a-3p 0 1 0
chr16:31371485|31371772 hsa-miR-6792-5p 1 0 0
chr16:31371485|31371772 hsa-miR-2277-5p 1 1 0
chr16:31371485|31371772 hsa-miR-1207-5p 1 0 0
chr16:31371485|31371772 hsa-miR-1233-5p 1 1 0
chr16:31371485|31371772 hsa-miR-4763-3p 1 1 0
chr16:31371485|31371772 hsa-miR-6778-5p 1 1 0
chr16:31371485|31371772 hsa-miR-6816-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6865-5p 1 1 0
chr16:31371485|31371772 hsa-miR-6870-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6893-5p 1 0 0
chr16:31371485|31371772 hsa-miR-5001-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6737-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6743-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6752-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6754-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6756-5p 1 1 0
chr16:31371485|31371772 hsa-miR-6769a-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6803-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6813-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6815-5p 1 1 0
chr16:31371485|31371772 hsa-miR-6819-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6851-5p 1 1 0
chr16:31371485|31371772 hsa-miR-7107-5p 1 1 0
chr16:31371485|31371772 hsa-miR-10401-5p 1 0 0
chr16:31371485|31371772 hsa-miR-1249-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6722-3p 1 1 0
chr16:31371485|31371772 hsa-miR-6751-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6779-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6797-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6808-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6879-5p 1 0 0
chr16:31371485|31371772 hsa-miR-3620-5p 1 0 0
chr16:31371485|31371772 hsa-miR-4728-5p 1 1 0
chr16:31371485|31371772 hsa-miR-5196-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6780b-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6836-5p 1 0 0
chr16:31371485|31371772 hsa-miR-1909-3p 1 0 0
chr16:31371485|31371772 hsa-miR-328-5p 1 0 0
chr16:31371485|31371772 hsa-miR-4649-5p 1 0 0
chr16:31371485|31371772 hsa-miR-4685-5p 1 0 0
chr16:31371485|31371772 hsa-miR-4701-3p 1 0 0
chr16:31371485|31371772 hsa-miR-4725-3p 1 0 0
chr16:31371485|31371772 hsa-miR-4726-5p 1 0 0
chr16:31371485|31371772 hsa-miR-4749-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6777-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6794-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6795-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6846-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6848-5p 1 1 0
chr16:31371485|31371772 hsa-miR-6858-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6887-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6889-5p 1 0 0
chr16:31371485|31371772 hsa-miR-939-5p 1 0 0
chr16:31371485|31371772 hsa-miR-365a-5p 1 1 0
chr16:31371485|31371772 hsa-miR-3940-5p 1 1 0
chr16:31371485|31371772 hsa-miR-6731-5p 1 0 0
chr16:31371485|31371772 hsa-miR-4665-5p 0 1 0
chr16:31371485|31371772 hsa-miR-541-3p 1 0 0
chr16:31371485|31371772 hsa-miR-6766-5p 1 1 0
chr16:31371485|31371772 hsa-miR-6785-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6849-5p 1 0 0
chr16:31371485|31371772 hsa-miR-6762-5p 1 0 0
chr16:31371485|31371772 hsa-miR-769-3p 1 0 0
chr16:31371485|31371772 hsa-miR-363-5p 1 1 0
chr16:31371485|31371772 hsa-miR-3681-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:31371485|31371772
ORF Type ORF1
Protein Length 79
Nucleotide Length 237
Protein Sequence MESPIPGPCLPPCSLSTQGVPVSTPSLRPPTGDLQSSVTLDLALDPGRLSPRATFQETKNRSLSRVRVLGLKAHCENFN
Nucleotide Sequence CTGGAGTCCCCCATCCCAGGCCCCTGTCTCCCACCCTGCTCATTGTCCACCCAAGGAGTTCCTGTCTCAACGCCGTCCCTGCGACCGCCTACAGGTGACCTCCAAAGCTCTGTGACCTTGGACCTGGCCCTCGACCCTGGCCGCCTGAGTCCCCGTGCCACCTTCCAGGAAACAAAGAACCGGAGTCTGAGCCGAGTCCGAGTCCTCGGGCTGAAGGCACACTGTGAAAACTTCAAC
CircID chr16:31371485|31371772
ORF Type ORF2
Protein Length 53
Nucleotide Length 162
Protein Sequence MGAVSPLPSNPGHPDLWSPPSQAPVSHPAHCPPKEFLSQRRPCDRLQVTSKAL
Nucleotide Sequence TTGGGAGCCGTGAGTCCCCTCCCCTCCAACCCAGGACACCCTGACCTCTGGAGTCCCCCATCCCAGGCCCCTGTCTCCCACCCTGCTCATTGTCCACCCAAGGAGTTCCTGTCTCAACGCCGTCCCTGCGACCGCCTACAGGTGACCTCCAAAGCTCTGTGA
CircID chr16:31371485|31371772
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MTSGVPHPRPLSPTLLIVHPRSSCLNAVPATAYR
Nucleotide Sequence CTGACCTCTGGAGTCCCCCATCCCAGGCCCCTGTCTCCCACCCTGCTCATTGTCCACCCAAGGAGTTCCTGTCTCAACGCCGTCCCTGCGACCGCCTACAGGTGA
CircID chr16:31371485|31371772
ORF Type ORF4
Protein Length 33
Nucleotide Length 102
Protein Sequence MEGGTGTQAARVEGQVQGHRALEVTCRRSQGRR
Nucleotide Sequence CTGGAAGGTGGCACGGGGACTCAGGCGGCCAGGGTCGAGGGCCAGGTCCAAGGTCACAGAGCTTTGGAGGTCACCTGTAGGCGGTCGCAGGGACGGCGTTGA
CircID chr16:31371485|31371772
ORF Type ORF5
Protein Length 95
Nucleotide Length 285
Protein Sequence LKFSQCAFSPRTRTRLRLRFFVSWKVARGLRRPGSRARSKVTELWRSPVGGRRDGVETGTPWVDNEQGGRQGPGMGDSRGQGVLGWRGGDSRLPS
Nucleotide Sequence TTGAAGTTTTCACAGTGTGCCTTCAGCCCGAGGACTCGGACTCGGCTCAGACTCCGGTTCTTTGTTTCCTGGAAGGTGGCACGGGGACTCAGGCGGCCAGGGTCGAGGGCCAGGTCCAAGGTCACAGAGCTTTGGAGGTCACCTGTAGGCGGTCGCAGGGACGGCGTTGAGACAGGAACTCCTTGGGTGGACAATGAGCAGGGTGGGAGACAGGGGCCTGGGATGGGGGACTCCAGAGGTCAGGGTGTCCTGGGTTGGAGGGGAGGGGACTCACGGCTCCCAAGC
CircID chr16:31371485|31371772
ORF Type ORF6
Protein Length 28
Nucleotide Length 87
Protein Sequence MFPGRWHGDSGGQGRGPGPRSQSFGGHL
Nucleotide Sequence TTGTTTCCTGGAAGGTGGCACGGGGACTCAGGCGGCCAGGGTCGAGGGCCAGGTCCAAGGTCACAGAGCTTTGGAGGTCACCTGTAG
CircID chr16:31371485|31371772
ORF Type ORF7
Protein Length 40
Nucleotide Length 120
Protein Sequence MRQELLGWTMSRVGDRGLGWGTPEVRVSWVGGEGTHGSQA
Nucleotide Sequence TTGAGACAGGAACTCCTTGGGTGGACAATGAGCAGGGTGGGAGACAGGGGCCTGGGATGGGGGACTCCAGAGGTCAGGGTGTCCTGGGTTGGAGGGGAGGGGACTCACGGCTCCCAAGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab