CircRNA Information

General Information
circRNA Basic Information
CircID chr16:3142365|3142517
Strand -
CircType exon
Host Gene ENSG00000085644.12;
Algorism CIRI2;
Sequence CCGCTCCTTTGACATTGGTGCCCCACTCCATCAGCACTAACGCCCTGCTCCATCGGCACTGGTGTCCCACTCCATTGTCACTAACGTCCGGCTCCATCGGCACTACCACCCCGCTCCATCATCACTATGTCCAGCTCCGTCGGCACTACCACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:3142365|3142517 hsa-miR-122-5p 0 0 1
chr16:3142365|3142517 hsa-miR-122-3p 0 0 1
chr16:3142365|3142517 hsa-miR-519e-5p 0 0 1
chr16:3142365|3142517 hsa-miR-519e-3p 0 0 1
chr16:3142365|3142517 hsa-miR-520f-5p 0 0 1
chr16:3142365|3142517 hsa-miR-520f-3p 0 0 1
chr16:3142365|3142517 hsa-miR-608 1 1 1
chr16:3142365|3142517 hsa-miR-921 0 0 1
chr16:3142365|3142517 hsa-miR-1293 0 0 1
chr16:3142365|3142517 hsa-miR-1825 0 0 1
chr16:3142365|3142517 hsa-miR-512-3p 0 0 1
chr16:3142365|3142517 hsa-miR-486-3p 0 0 1
chr16:3142365|3142517 hsa-miR-515-3p 0 0 1
chr16:3142365|3142517 hsa-miR-1302 0 0 1
chr16:3142365|3142517 hsa-miR-371-3p 0 0 1
chr16:3142365|3142517 hsa-miR-1245 0 0 1
chr16:3142365|3142517 hsa-miR-663a 1 0 0
chr16:3142365|3142517 hsa-miR-762 1 0 0
chr16:3142365|3142517 hsa-miR-761 1 0 0
chr16:3142365|3142517 hsa-miR-1268a 1 0 0
chr16:3142365|3142517 hsa-miR-1272 1 0 0
chr16:3142365|3142517 hsa-miR-2861 1 0 0
chr16:3142365|3142517 hsa-miR-3141 1 0 0
chr16:3142365|3142517 hsa-miR-1193 1 0 0
chr16:3142365|3142517 hsa-miR-3196 1 0 0
chr16:3142365|3142517 hsa-miR-378c 1 0 0
chr16:3142365|3142517 hsa-miR-4298 1 0 0
chr16:3142365|3142517 hsa-miR-4300 1 0 0
chr16:3142365|3142517 hsa-miR-4270 1 0 0
chr16:3142365|3142517 hsa-miR-3652 1 0 0
chr16:3142365|3142517 hsa-miR-3918 1 0 0
chr16:3142365|3142517 hsa-miR-3945 1 0 0
chr16:3142365|3142517 hsa-miR-1268b 1 0 0
chr16:3142365|3142517 hsa-miR-4430 1 0 0
chr16:3142365|3142517 hsa-miR-378h 1 0 0
chr16:3142365|3142517 hsa-miR-3135b 1 0 0
chr16:3142365|3142517 hsa-miR-4466 1 0 0
chr16:3142365|3142517 hsa-miR-4481 1 1 0
chr16:3142365|3142517 hsa-miR-4488 1 0 0
chr16:3142365|3142517 hsa-miR-4492 1 0 0
chr16:3142365|3142517 hsa-miR-4498 1 0 0
chr16:3142365|3142517 hsa-miR-4502 1 0 0
chr16:3142365|3142517 hsa-miR-4504 0 1 0
chr16:3142365|3142517 hsa-miR-4508 1 0 0
chr16:3142365|3142517 hsa-miR-4516 1 0 0
chr16:3142365|3142517 hsa-miR-4534 1 1 0
chr16:3142365|3142517 hsa-miR-1587 1 0 0
chr16:3142365|3142517 hsa-miR-4651 1 0 0
chr16:3142365|3142517 hsa-miR-4706 1 0 0
chr16:3142365|3142517 hsa-miR-4785 1 0 0
chr16:3142365|3142517 hsa-miR-5090 1 0 0
chr16:3142365|3142517 hsa-miR-6081 1 0 0
chr16:3142365|3142517 hsa-miR-6085 1 0 0
chr16:3142365|3142517 hsa-miR-6131 1 0 0
chr16:3142365|3142517 hsa-miR-6132 1 0 0
chr16:3142365|3142517 hsa-miR-6860 1 0 0
chr16:3142365|3142517 hsa-miR-8072 1 0 0
chr16:3142365|3142517 hsa-miR-8075 0 1 0
chr16:3142365|3142517 hsa-miR-8082 1 1 0
chr16:3142365|3142517 hsa-miR-9718 1 0 0
chr16:3142365|3142517 hsa-miR-12115 1 0 0
chr16:3142365|3142517 hsa-miR-135a-3p 1 0 0
chr16:3142365|3142517 hsa-miR-4433b-3p 1 0 0
chr16:3142365|3142517 hsa-miR-323a-5p 1 0 0
chr16:3142365|3142517 hsa-miR-1287-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6765-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6825-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6510-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6728-5p 1 0 0
chr16:3142365|3142517 hsa-miR-7114-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6089 1 0 0
chr16:3142365|3142517 hsa-miR-6890-5p 0 1 0
chr16:3142365|3142517 hsa-miR-6721-5p 1 0 0
chr16:3142365|3142517 hsa-miR-8069 1 0 0
chr16:3142365|3142517 hsa-miR-7108-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6742-5p 1 0 0
chr16:3142365|3142517 hsa-miR-3151-5p 0 1 0
chr16:3142365|3142517 hsa-miR-3180-3p 1 0 0
chr16:3142365|3142517 hsa-miR-6796-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6805-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6782-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6514-5p 0 1 0
chr16:3142365|3142517 hsa-miR-6874-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6786-5p 1 0 0
chr16:3142365|3142517 hsa-miR-1909-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6784-5p 1 0 0
chr16:3142365|3142517 hsa-miR-4640-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6753-5p 1 0 0
chr16:3142365|3142517 hsa-miR-1228-5p 1 0 0
chr16:3142365|3142517 hsa-miR-4690-5p 1 0 0
chr16:3142365|3142517 hsa-miR-485-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6749-5p 1 0 0
chr16:3142365|3142517 hsa-miR-4743-5p 1 0 0
chr16:3142365|3142517 hsa-miR-4638-3p 1 0 0
chr16:3142365|3142517 hsa-miR-4446-3p 1 0 0
chr16:3142365|3142517 hsa-miR-3162-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6781-5p 1 0 0
chr16:3142365|3142517 hsa-miR-7850-5p 1 0 0
chr16:3142365|3142517 hsa-miR-4776-5p 1 0 0
chr16:3142365|3142517 hsa-miR-7112-5p 1 0 0
chr16:3142365|3142517 hsa-miR-1250-5p 1 0 0
chr16:3142365|3142517 hsa-miR-744-5p 1 0 0
chr16:3142365|3142517 hsa-miR-4750-5p 1 0 0
chr16:3142365|3142517 hsa-miR-1296-3p 0 1 0
chr16:3142365|3142517 hsa-miR-10400-5p 1 0 0
chr16:3142365|3142517 hsa-miR-1207-5p 1 0 0
chr16:3142365|3142517 hsa-miR-1233-5p 1 0 0
chr16:3142365|3142517 hsa-miR-4763-3p 1 1 0
chr16:3142365|3142517 hsa-miR-6787-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6812-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6816-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6775-5p 1 0 0
chr16:3142365|3142517 hsa-miR-1343-5p 1 0 0
chr16:3142365|3142517 hsa-miR-5001-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6726-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6737-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6743-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6756-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6803-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6819-5p 1 1 0
chr16:3142365|3142517 hsa-miR-6842-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6851-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6722-3p 1 0 0
chr16:3142365|3142517 hsa-miR-6808-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6879-5p 1 0 0
chr16:3142365|3142517 hsa-miR-3620-5p 1 0 0
chr16:3142365|3142517 hsa-miR-5189-5p 1 1 0
chr16:3142365|3142517 hsa-miR-6836-5p 1 1 0
chr16:3142365|3142517 hsa-miR-10396a-5p 1 0 0
chr16:3142365|3142517 hsa-miR-10396b-5p 1 0 0
chr16:3142365|3142517 hsa-miR-1237-5p 1 0 0
chr16:3142365|3142517 hsa-miR-1909-3p 1 0 0
chr16:3142365|3142517 hsa-miR-4649-5p 1 0 0
chr16:3142365|3142517 hsa-miR-4725-3p 1 0 0
chr16:3142365|3142517 hsa-miR-4726-5p 1 0 0
chr16:3142365|3142517 hsa-miR-4745-5p 1 1 0
chr16:3142365|3142517 hsa-miR-4749-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6777-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6846-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6848-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6887-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6889-5p 1 0 0
chr16:3142365|3142517 hsa-miR-3187-5p 1 0 0
chr16:3142365|3142517 hsa-miR-939-5p 1 0 0
chr16:3142365|3142517 hsa-miR-1238-5p 1 1 0
chr16:3142365|3142517 hsa-miR-4758-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6785-5p 1 0 0
chr16:3142365|3142517 hsa-miR-6724-5p 1 0 0
chr16:3142365|3142517 hsa-miR-9851-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:3142365|3142517
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MVSHSIVTNVRLHRHYHPAPSSLCPAPSALP
Nucleotide Sequence CTGGTGTCCCACTCCATTGTCACTAACGTCCGGCTCCATCGGCACTACCACCCCGCTCCATCATCACTATGTCCAGCTCCGTCGGCACTACCA
CircID chr16:3142365|3142517
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MTLVPHSISTNALLHRHWCPTPLSLTSGSIGTTTPLHHHYVQLRRHYH
Nucleotide Sequence TTGACATTGGTGCCCCACTCCATCAGCACTAACGCCCTGCTCCATCGGCACTGGTGTCCCACTCCATTGTCACTAACGTCCGGCTCCATCGGCACTACCACCCCGCTCCATCATCACTATGTCCAGCTCCGTCGGCACTACCAC
CircID chr16:3142365|3142517
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MEPDVSDNGVGHQCRWSRALVLMEWGTNVKGA
Nucleotide Sequence ATGGAGCCGGACGTTAGTGACAATGGAGTGGGACACCAGTGCCGATGGAGCAGGGCGTTAGTGCTGATGGAGTGGGGCACCAATGTCAAAGGAGCG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab