CircRNA Information

General Information
circRNA Basic Information
CircID chr16:31466329|31466490
Strand -
CircType exon
Host Gene ENSG00000140691.15;
Algorism CIRI2;
Sequence CTGCACTTCCTGCTGGACTCAGGCCTCCAGCTCCCTGCCCAGCGAGCGGCCTCAGCCACCGCCTCCCCTTTCTTCCGGGCCCTGCTGTCAGGCAGCTTTGCAGAAGCCCAGATGGACCTGGTGCCCCTGCGAGGTCTGTCGCCTGGTGCAGCCTGGCCTGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:31466329|31466490 hsa-miR-22-5p 0 0 1
chr16:31466329|31466490 hsa-miR-22-3p 0 0 1
chr16:31466329|31466490 hsa-miR-214-5p 0 0 1
chr16:31466329|31466490 hsa-miR-214-3p 0 0 1
chr16:31466329|31466490 hsa-miR-320a-5p 0 0 1
chr16:31466329|31466490 hsa-miR-320a-3p 0 0 1
chr16:31466329|31466490 hsa-miR-527 0 0 1
chr16:31466329|31466490 hsa-miR-612 1 1 1
chr16:31466329|31466490 hsa-miR-650 0 0 1
chr16:31466329|31466490 hsa-miR-920 0 0 1
chr16:31466329|31466490 hsa-miR-767-5p 0 0 1
chr16:31466329|31466490 hsa-miR-338-3p 0 0 1
chr16:31466329|31466490 hsa-miR-1207-5p 1 1 1
chr16:31466329|31466490 hsa-miR-320b 0 1 1
chr16:31466329|31466490 hsa-miR-320c 0 0 1
chr16:31466329|31466490 hsa-miR-320d 0 0 1
chr16:31466329|31466490 hsa-miR-519b-3p 0 0 1
chr16:31466329|31466490 hsa-miR-519c-3p 0 0 1
chr16:31466329|31466490 hsa-miR-518a-5p 0 0 1
chr16:31466329|31466490 hsa-miR-1285 0 0 1
chr16:31466329|31466490 hsa-miR-544 0 0 1
chr16:31466329|31466490 hsa-miR-720 0 0 1
chr16:31466329|31466490 hsa-miR-1273 0 0 1
chr16:31466329|31466490 hsa-miR-1201 0 0 1
chr16:31466329|31466490 hsa-miR-519a 0 0 1
chr16:31466329|31466490 hsa-miR-762 1 0 0
chr16:31466329|31466490 hsa-miR-940 1 0 0
chr16:31466329|31466490 hsa-miR-663b 1 0 0
chr16:31466329|31466490 hsa-miR-1268a 1 0 0
chr16:31466329|31466490 hsa-miR-1538 1 0 0
chr16:31466329|31466490 hsa-miR-2861 1 0 0
chr16:31466329|31466490 hsa-miR-3147 1 1 0
chr16:31466329|31466490 hsa-miR-3154 1 0 0
chr16:31466329|31466490 hsa-miR-3185 1 0 0
chr16:31466329|31466490 hsa-miR-4300 0 1 0
chr16:31466329|31466490 hsa-miR-4270 0 1 0
chr16:31466329|31466490 hsa-miR-4281 1 0 0
chr16:31466329|31466490 hsa-miR-3652 0 1 0
chr16:31466329|31466490 hsa-miR-3660 0 1 0
chr16:31466329|31466490 hsa-miR-3918 0 1 0
chr16:31466329|31466490 hsa-miR-1268b 1 0 0
chr16:31466329|31466490 hsa-miR-4443 0 1 0
chr16:31466329|31466490 hsa-miR-3135b 0 1 0
chr16:31466329|31466490 hsa-miR-4526 1 1 0
chr16:31466329|31466490 hsa-miR-4530 0 1 0
chr16:31466329|31466490 hsa-miR-4533 1 0 0
chr16:31466329|31466490 hsa-miR-3960 1 0 0
chr16:31466329|31466490 hsa-miR-4656 1 0 0
chr16:31466329|31466490 hsa-miR-4669 1 0 0
chr16:31466329|31466490 hsa-miR-4674 1 0 0
chr16:31466329|31466490 hsa-miR-4688 0 1 0
chr16:31466329|31466490 hsa-miR-4706 1 0 0
chr16:31466329|31466490 hsa-miR-4721 1 0 0
chr16:31466329|31466490 hsa-miR-5787 1 0 0
chr16:31466329|31466490 hsa-miR-6077 1 0 0
chr16:31466329|31466490 hsa-miR-6125 1 0 0
chr16:31466329|31466490 hsa-miR-6132 1 1 0
chr16:31466329|31466490 hsa-miR-6165 1 1 0
chr16:31466329|31466490 hsa-miR-6860 1 1 0
chr16:31466329|31466490 hsa-miR-7150 1 0 0
chr16:31466329|31466490 hsa-miR-8073 1 1 0
chr16:31466329|31466490 hsa-miR-12120 1 0 0
chr16:31466329|31466490 hsa-miR-6765-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6861-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6825-5p 0 1 0
chr16:31466329|31466490 hsa-miR-1972 0 1 0
chr16:31466329|31466490 hsa-miR-6510-5p 1 1 0
chr16:31466329|31466490 hsa-miR-766-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6089 1 1 0
chr16:31466329|31466490 hsa-miR-6746-5p 1 1 0
chr16:31466329|31466490 hsa-miR-4722-5p 1 0 0
chr16:31466329|31466490 hsa-miR-4755-3p 0 1 0
chr16:31466329|31466490 hsa-miR-593-5p 0 1 0
chr16:31466329|31466490 hsa-miR-7160-5p 0 1 0
chr16:31466329|31466490 hsa-miR-6721-5p 1 1 0
chr16:31466329|31466490 hsa-miR-197-5p 1 0 0
chr16:31466329|31466490 hsa-miR-3180-3p 1 0 0
chr16:31466329|31466490 hsa-miR-6732-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6798-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6760-5p 1 0 0
chr16:31466329|31466490 hsa-miR-3130-3p 0 1 0
chr16:31466329|31466490 hsa-miR-5008-5p 1 0 0
chr16:31466329|31466490 hsa-miR-5088-5p 1 0 0
chr16:31466329|31466490 hsa-miR-1226-5p 1 0 0
chr16:31466329|31466490 hsa-miR-1229-5p 1 0 0
chr16:31466329|31466490 hsa-miR-4640-5p 1 1 0
chr16:31466329|31466490 hsa-miR-1228-5p 1 0 0
chr16:31466329|31466490 hsa-miR-4690-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6749-5p 1 0 0
chr16:31466329|31466490 hsa-miR-4733-3p 0 1 0
chr16:31466329|31466490 hsa-miR-6824-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6781-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6878-5p 1 0 0
chr16:31466329|31466490 hsa-miR-7846-3p 1 0 0
chr16:31466329|31466490 hsa-miR-744-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6801-5p 1 0 0
chr16:31466329|31466490 hsa-miR-1296-5p 1 0 0
chr16:31466329|31466490 hsa-miR-1298-3p 0 1 0
chr16:31466329|31466490 hsa-miR-10400-5p 1 0 0
chr16:31466329|31466490 hsa-miR-1233-5p 1 0 0
chr16:31466329|31466490 hsa-miR-4763-3p 1 1 0
chr16:31466329|31466490 hsa-miR-6816-5p 1 0 0
chr16:31466329|31466490 hsa-miR-1343-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6726-5p 1 1 0
chr16:31466329|31466490 hsa-miR-6754-5p 0 1 0
chr16:31466329|31466490 hsa-miR-6756-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6851-5p 1 1 0
chr16:31466329|31466490 hsa-miR-7107-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6722-3p 1 1 0
chr16:31466329|31466490 hsa-miR-6808-5p 1 1 0
chr16:31466329|31466490 hsa-miR-6879-5p 1 0 0
chr16:31466329|31466490 hsa-miR-7111-5p 1 0 0
chr16:31466329|31466490 hsa-miR-3620-5p 1 0 0
chr16:31466329|31466490 hsa-miR-5189-5p 0 1 0
chr16:31466329|31466490 hsa-miR-5196-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6836-5p 1 1 0
chr16:31466329|31466490 hsa-miR-10396a-5p 1 0 0
chr16:31466329|31466490 hsa-miR-10526-3p 0 1 0
chr16:31466329|31466490 hsa-miR-1237-5p 1 0 0
chr16:31466329|31466490 hsa-miR-1909-3p 1 1 0
chr16:31466329|31466490 hsa-miR-328-5p 1 0 0
chr16:31466329|31466490 hsa-miR-4685-5p 0 1 0
chr16:31466329|31466490 hsa-miR-4726-5p 1 0 0
chr16:31466329|31466490 hsa-miR-4749-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6729-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6848-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6889-5p 0 1 0
chr16:31466329|31466490 hsa-miR-3187-5p 0 1 0
chr16:31466329|31466490 hsa-miR-939-5p 1 1 0
chr16:31466329|31466490 hsa-miR-6856-5p 1 1 0
chr16:31466329|31466490 hsa-miR-10398-3p 1 0 0
chr16:31466329|31466490 hsa-miR-4646-5p 1 0 0
chr16:31466329|31466490 hsa-miR-6785-5p 1 0 0
chr16:31466329|31466490 hsa-miR-5591-5p 0 1 0
chr16:31466329|31466490 hsa-miR-6724-5p 1 0 0
chr16:31466329|31466490 hsa-miR-9851-3p 0 1 0
chr16:31466329|31466490 hsa-miR-3619-5p 1 1 0
chr16:31466329|31466490 hsa-miR-6811-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:31466329|31466490
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence LHFLLDSGLQLPAQRAASATASPFFRALLSGSFAEAQMDLVPLRGLSPGAAWPV
Nucleotide Sequence CTGCACTTCCTGCTGGACTCAGGCCTCCAGCTCCCTGCCCAGCGAGCGGCCTCAGCCACCGCCTCCCCTTTCTTCCGGGCCCTGCTGTCAGGCAGCTTTGCAGAAGCCCAGATGGACCTGGTGCCCCTGCGAGGTCTGTCGCCTGGTGCAGCCTGGCCTGTC
CircID chr16:31466329|31466490
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MPSERPQPPPPLSSGPCCQAALQKPRWTWCPCEVCRLVQPGL
Nucleotide Sequence CTGCCCAGCGAGCGGCCTCAGCCACCGCCTCCCCTTTCTTCCGGGCCCTGCTGTCAGGCAGCTTTGCAGAAGCCCAGATGGACCTGGTGCCCCTGCGAGGTCTGTCGCCTGGTGCAGCCTGGCCTG
CircID chr16:31466329|31466490
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MPDSRARKKGEAVAEAARWAGSWRPESSRKC
Nucleotide Sequence CTGCCTGACAGCAGGGCCCGGAAGAAAGGGGAGGCGGTGGCTGAGGCCGCTCGCTGGGCAGGGAGCTGGAGGCCTGAGTCCAGCAGGAAGTGC
CircID chr16:31466329|31466490
ORF Type ORF4
Protein Length 50
Nucleotide Length 150
Protein Sequence MHQATDLAGAPGPSGLLQSCLTAGPGRKGRRWLRPLAGQGAGGLSPAGSA
Nucleotide Sequence CTGCACCAGGCGACAGACCTCGCAGGGGCACCAGGTCCATCTGGGCTTCTGCAAAGCTGCCTGACAGCAGGGCCCGGAAGAAAGGGGAGGCGGTGGCTGAGGCCGCTCGCTGGGCAGGGAGCTGGAGGCCTGAGTCCAGCAGGAAGTGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab