CircRNA Information

General Information
circRNA Basic Information
CircID chr16:31473487|31473852
Strand +
CircType exon
Host Gene ENSG00000140682.17;
Algorism CIRI2;
Sequence CGAGGCTTGCATACCGTGCTGTACAGGTGGTCCTTGTCCCCCGAGGCTCCTGAAGACTCCCCAGACCCTGTCTACAGAGCGGAGACGCACAGGTGGGATGACAGGCCTGCACTCTGCCCCACTGAGGCTGAGATCCCCATAGACCAGGCCGAGCCTGGCCCTAGTGGCTGCCCCAGTCCCCAACATCCGATCTCACCTGTGGCTGGTGGCCATAGGATGGGGGAGGGGTGAGAGGCTCCGCAGGGCGCTCTTTGGGAGCCCCTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:31473487|31473852 hsa-miR-210-5p 0 0 1
chr16:31473487|31473852 hsa-miR-210-3p 0 0 1
chr16:31473487|31473852 hsa-miR-150-5p 0 0 1
chr16:31473487|31473852 hsa-miR-150-3p 0 0 1
chr16:31473487|31473852 hsa-miR-484 0 0 1
chr16:31473487|31473852 hsa-miR-552-5p 0 0 1
chr16:31473487|31473852 hsa-miR-552-3p 0 0 1
chr16:31473487|31473852 hsa-miR-572 0 0 1
chr16:31473487|31473852 hsa-miR-588 0 1 1
chr16:31473487|31473852 hsa-miR-601 0 0 1
chr16:31473487|31473852 hsa-miR-637 1 0 1
chr16:31473487|31473852 hsa-miR-658 0 0 1
chr16:31473487|31473852 hsa-miR-1296-5p 0 0 1
chr16:31473487|31473852 hsa-miR-1296-3p 0 0 1
chr16:31473487|31473852 hsa-miR-924 0 1 1
chr16:31473487|31473852 hsa-miR-939-5p 0 0 1
chr16:31473487|31473852 hsa-miR-939-3p 0 0 1
chr16:31473487|31473852 hsa-miR-1182 1 1 1
chr16:31473487|31473852 hsa-miR-1226-5p 0 0 1
chr16:31473487|31473852 hsa-miR-1226-3p 0 0 1
chr16:31473487|31473852 hsa-miR-1229-5p 0 0 1
chr16:31473487|31473852 hsa-miR-1229-3p 0 0 1
chr16:31473487|31473852 hsa-miR-1234-3p 0 0 1
chr16:31473487|31473852 hsa-miR-1276 0 1 1
chr16:31473487|31473852 hsa-miR-1234 0 0 1
chr16:31473487|31473852 hsa-miR-125a-3p 1 1 1
chr16:31473487|31473852 hsa-miR-486-5p 0 0 1
chr16:31473487|31473852 hsa-miR-486-3p 0 1 1
chr16:31473487|31473852 hsa-miR-339-3p 0 0 1
chr16:31473487|31473852 hsa-miR-361-3p 0 0 1
chr16:31473487|31473852 hsa-miR-1224-3p 0 1 1
chr16:31473487|31473852 hsa-miR-1260 0 0 1
chr16:31473487|31473852 hsa-miR-1280 0 0 1
chr16:31473487|31473852 hsa-miR-638 1 0 0
chr16:31473487|31473852 hsa-miR-661 1 0 0
chr16:31473487|31473852 hsa-miR-663a 1 0 0
chr16:31473487|31473852 hsa-miR-762 1 0 0
chr16:31473487|31473852 hsa-miR-759 0 1 0
chr16:31473487|31473852 hsa-miR-1260a 0 1 0
chr16:31473487|31473852 hsa-miR-2110 1 0 0
chr16:31473487|31473852 hsa-miR-3137 1 0 0
chr16:31473487|31473852 hsa-miR-3138 1 0 0
chr16:31473487|31473852 hsa-miR-3155a 0 1 0
chr16:31473487|31473852 hsa-miR-3196 1 0 0
chr16:31473487|31473852 hsa-miR-4294 0 1 0
chr16:31473487|31473852 hsa-miR-3665 1 0 0
chr16:31473487|31473852 hsa-miR-3155b 0 1 0
chr16:31473487|31473852 hsa-miR-4656 1 0 0
chr16:31473487|31473852 hsa-miR-4688 1 0 0
chr16:31473487|31473852 hsa-miR-5090 1 1 0
chr16:31473487|31473852 hsa-miR-6085 1 0 0
chr16:31473487|31473852 hsa-miR-8052 0 1 0
chr16:31473487|31473852 hsa-miR-8089 1 1 0
chr16:31473487|31473852 hsa-miR-12119 1 0 0
chr16:31473487|31473852 hsa-miR-214-5p 0 1 0
chr16:31473487|31473852 hsa-miR-4665-3p 1 0 0
chr16:31473487|31473852 hsa-miR-4433a-3p 1 0 0
chr16:31473487|31473852 hsa-miR-3150a-3p 0 1 0
chr16:31473487|31473852 hsa-miR-6825-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6857-5p 1 1 0
chr16:31473487|31473852 hsa-miR-4687-3p 1 0 0
chr16:31473487|31473852 hsa-miR-6892-3p 0 1 0
chr16:31473487|31473852 hsa-miR-7114-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6089 1 0 0
chr16:31473487|31473852 hsa-miR-4755-3p 0 1 0
chr16:31473487|31473852 hsa-miR-6890-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6741-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6806-5p 1 0 0
chr16:31473487|31473852 hsa-miR-7108-5p 1 0 0
chr16:31473487|31473852 hsa-miR-3663-5p 0 1 0
chr16:31473487|31473852 hsa-miR-6742-5p 1 0 0
chr16:31473487|31473852 hsa-miR-423-3p 1 0 0
chr16:31473487|31473852 hsa-miR-3151-5p 1 1 0
chr16:31473487|31473852 hsa-miR-3180-3p 1 0 0
chr16:31473487|31473852 hsa-miR-6810-5p 1 1 0
chr16:31473487|31473852 hsa-miR-6735-3p 0 1 0
chr16:31473487|31473852 hsa-miR-7109-3p 0 1 0
chr16:31473487|31473852 hsa-miR-6786-5p 1 0 0
chr16:31473487|31473852 hsa-miR-4640-5p 1 1 0
chr16:31473487|31473852 hsa-miR-4691-3p 0 1 0
chr16:31473487|31473852 hsa-miR-4713-3p 1 0 0
chr16:31473487|31473852 hsa-miR-7111-3p 0 1 0
chr16:31473487|31473852 hsa-miR-4743-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6824-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6789-5p 1 1 0
chr16:31473487|31473852 hsa-miR-6800-5p 1 0 0
chr16:31473487|31473852 hsa-miR-146b-3p 0 1 0
chr16:31473487|31473852 hsa-miR-6886-5p 1 1 0
chr16:31473487|31473852 hsa-miR-194-3p 1 1 0
chr16:31473487|31473852 hsa-miR-450a-2-3p 0 1 0
chr16:31473487|31473852 hsa-miR-6895-5p 0 1 0
chr16:31473487|31473852 hsa-miR-423-5p 1 0 0
chr16:31473487|31473852 hsa-miR-3191-3p 1 0 0
chr16:31473487|31473852 hsa-miR-4652-5p 0 1 0
chr16:31473487|31473852 hsa-miR-6887-3p 0 1 0
chr16:31473487|31473852 hsa-miR-6895-3p 0 1 0
chr16:31473487|31473852 hsa-miR-2114-3p 0 1 0
chr16:31473487|31473852 hsa-miR-6802-3p 0 1 0
chr16:31473487|31473852 hsa-miR-3173-5p 0 1 0
chr16:31473487|31473852 hsa-miR-4650-5p 0 1 0
chr16:31473487|31473852 hsa-miR-1207-5p 1 0 0
chr16:31473487|31473852 hsa-miR-4763-3p 1 0 0
chr16:31473487|31473852 hsa-miR-6816-5p 1 0 0
chr16:31473487|31473852 hsa-miR-1343-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6726-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6743-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6752-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6756-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6803-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6813-5p 1 1 0
chr16:31473487|31473852 hsa-miR-6763-5p 1 0 0
chr16:31473487|31473852 hsa-miR-3620-5p 1 0 0
chr16:31473487|31473852 hsa-miR-1909-3p 1 0 0
chr16:31473487|31473852 hsa-miR-4726-5p 1 0 0
chr16:31473487|31473852 hsa-miR-4745-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6777-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6794-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6795-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6848-5p 1 1 0
chr16:31473487|31473852 hsa-miR-6889-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6885-5p 1 0 0
chr16:31473487|31473852 hsa-miR-1238-5p 1 0 0
chr16:31473487|31473852 hsa-miR-4758-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6799-3p 0 1 0
chr16:31473487|31473852 hsa-miR-4665-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6855-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6877-3p 0 1 0
chr16:31473487|31473852 hsa-miR-4646-5p 1 0 0
chr16:31473487|31473852 hsa-miR-4667-5p 0 1 0
chr16:31473487|31473852 hsa-miR-6791-5p 1 0 0
chr16:31473487|31473852 hsa-miR-6753-3p 1 0 0
chr16:31473487|31473852 hsa-miR-7107-3p 0 1 0
chr16:31473487|31473852 hsa-miR-6762-5p 1 1 0
chr16:31473487|31473852 hsa-miR-6784-3p 0 1 0
chr16:31473487|31473852 hsa-miR-6862-3p 0 1 0
chr16:31473487|31473852 hsa-miR-6819-3p 0 1 0
chr16:31473487|31473852 hsa-miR-6823-3p 0 1 0
chr16:31473487|31473852 hsa-miR-4701-5p 0 1 0
chr16:31473487|31473852 hsa-miR-6811-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:31473487|31473852
ORF Type ORF1
Protein Length 74
Nucleotide Length 225
Protein Sequence MHTVLYRWSLSPEAPEDSPDPVYRAETHRWDDRPALCPTEAEIPIDQAEPGPSGCPSPQHPISPVAGGHRMGEG
Nucleotide Sequence TTGCATACCGTGCTGTACAGGTGGTCCTTGTCCCCCGAGGCTCCTGAAGACTCCCCAGACCCTGTCTACAGAGCGGAGACGCACAGGTGGGATGACAGGCCTGCACTCTGCCCCACTGAGGCTGAGATCCCCATAGACCAGGCCGAGCCTGGCCCTAGTGGCTGCCCCAGTCCCCAACATCCGATCTCACCTGTGGCTGGTGGCCATAGGATGGGGGAGGGGTGA
CircID chr16:31473487|31473852
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MKTPQTLSTERRRTGGMTGLHSAPLRLRSP
Nucleotide Sequence CTGAAGACTCCCCAGACCCTGTCTACAGAGCGGAGACGCACAGGTGGGATGACAGGCCTGCACTCTGCCCCACTGAGGCTGAGATCCCCATAG
CircID chr16:31473487|31473852
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MALVAAPVPNIRSHLWLVAIGWGRGERLRRALFGSP
Nucleotide Sequence CTGGCCCTAGTGGCTGCCCCAGTCCCCAACATCCGATCTCACCTGTGGCTGGTGGCCATAGGATGGGGGAGGGGTGAGAGGCTCCGCAGGGCGCTCTTTGGGAGCCCCTGA
CircID chr16:31473487|31473852
ORF Type ORF4
Protein Length 34
Nucleotide Length 105
Protein Sequence MGQPLGPGSAWSMGISASVGQSAGLSSHLCVSAL
Nucleotide Sequence CTGGGGCAGCCACTAGGGCCAGGCTCGGCCTGGTCTATGGGGATCTCAGCCTCAGTGGGGCAGAGTGCAGGCCTGTCATCCCACCTGTGCGTCTCCGCTCTGTAG
CircID chr16:31473487|31473852
ORF Type ORF5
Protein Length 62
Nucleotide Length 186
Protein Sequence MLGTGAATRARLGLVYGDLSLSGAECRPVIPPVRLRSVDRVWGVFRSLGGQGPPVQHGMQAS
Nucleotide Sequence ATGTTGGGGACTGGGGCAGCCACTAGGGCCAGGCTCGGCCTGGTCTATGGGGATCTCAGCCTCAGTGGGGCAGAGTGCAGGCCTGTCATCCCACCTGTGCGTCTCCGCTCTGTAGACAGGGTCTGGGGAGTCTTCAGGAGCCTCGGGGGACAAGGACCACCTGTACAGCACGGTATGCAAGCCTCG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab