CircRNA Information

General Information
circRNA Basic Information
CircID chr16:4512591|4512888
Strand -
CircType exon
Host Gene ENSG00000089486.15;
Algorism CIRI2;
Sequence GTGTAGATGTAGGCTTTGCAGCTGGGGCATGTGTGCGTCACATCCTTGAAGTCATTGATGAGGCAGGGGATCAGGCAGCAGCCCAGATCACATCTGAATCAGAGACAGGGAAGAACAGGCTGAGGCCTGCTGCGGAGGAGGCAGAGGCAGCCAGTTGACCCTGGTGCAGCCCCCACCCTACCAGTGCCCACACCACCTACCCCATGAAGCAACAGAAGAAACCCAGCACGAAATTCATCAAGCCAATCTCGTAGGAGATCTTGGTGGTGATGGCCTGCTGGCAGTGGGGACACACCGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:4512591|4512888 hsa-miR-197-5p 0 0 1
chr16:4512591|4512888 hsa-miR-197-3p 0 0 1
chr16:4512591|4512888 hsa-miR-214-5p 0 0 1
chr16:4512591|4512888 hsa-miR-214-3p 0 0 1
chr16:4512591|4512888 hsa-miR-517-5p 0 0 1
chr16:4512591|4512888 hsa-miR-517a-3p 0 0 1
chr16:4512591|4512888 hsa-miR-517c-3p 0 0 1
chr16:4512591|4512888 hsa-miR-527 0 0 1
chr16:4512591|4512888 hsa-miR-593-5p 0 0 1
chr16:4512591|4512888 hsa-miR-593-3p 0 0 1
chr16:4512591|4512888 hsa-miR-604 0 0 1
chr16:4512591|4512888 hsa-miR-612 0 0 1
chr16:4512591|4512888 hsa-miR-617 0 0 1
chr16:4512591|4512888 hsa-miR-629-5p 0 0 1
chr16:4512591|4512888 hsa-miR-629-3p 0 0 1
chr16:4512591|4512888 hsa-miR-647 0 1 1
chr16:4512591|4512888 hsa-miR-892b 0 1 1
chr16:4512591|4512888 hsa-miR-1202 0 0 1
chr16:4512591|4512888 hsa-miR-1265 0 1 1
chr16:4512591|4512888 hsa-miR-1267 0 0 1
chr16:4512591|4512888 hsa-miR-767-5p 0 0 1
chr16:4512591|4512888 hsa-miR-339-5p 0 0 1
chr16:4512591|4512888 hsa-miR-331-3p 0 0 1
chr16:4512591|4512888 hsa-miR-576-3p 0 0 1
chr16:4512591|4512888 hsa-miR-518a-5p 0 0 1
chr16:4512591|4512888 hsa-miR-220b 0 0 1
chr16:4512591|4512888 hsa-miR-1274a 0 0 1
chr16:4512591|4512888 hsa-miR-1274b 0 0 1
chr16:4512591|4512888 hsa-miR-1308 0 0 1
chr16:4512591|4512888 hsa-miR-1285 0 0 1
chr16:4512591|4512888 hsa-miR-1201 0 0 1
chr16:4512591|4512888 hsa-miR-602 1 0 0
chr16:4512591|4512888 hsa-miR-608 1 0 0
chr16:4512591|4512888 hsa-miR-637 1 0 0
chr16:4512591|4512888 hsa-miR-762 1 0 0
chr16:4512591|4512888 hsa-miR-760 1 0 0
chr16:4512591|4512888 hsa-miR-1913 1 0 0
chr16:4512591|4512888 hsa-miR-4307 1 0 0
chr16:4512591|4512888 hsa-miR-4322 1 1 0
chr16:4512591|4512888 hsa-miR-4259 1 0 0
chr16:4512591|4512888 hsa-miR-4286 0 1 0
chr16:4512591|4512888 hsa-miR-3911 1 0 0
chr16:4512591|4512888 hsa-miR-3945 1 0 0
chr16:4512591|4512888 hsa-miR-4421 0 1 0
chr16:4512591|4512888 hsa-miR-4447 0 1 0
chr16:4512591|4512888 hsa-miR-4466 1 0 0
chr16:4512591|4512888 hsa-miR-4481 1 0 0
chr16:4512591|4512888 hsa-miR-4498 1 0 0
chr16:4512591|4512888 hsa-miR-4501 0 1 0
chr16:4512591|4512888 hsa-miR-4507 1 0 0
chr16:4512591|4512888 hsa-miR-1587 1 0 0
chr16:4512591|4512888 hsa-miR-4651 1 1 0
chr16:4512591|4512888 hsa-miR-4656 1 0 0
chr16:4512591|4512888 hsa-miR-4710 1 0 0
chr16:4512591|4512888 hsa-miR-4741 1 0 0
chr16:4512591|4512888 hsa-miR-4767 1 0 0
chr16:4512591|4512888 hsa-miR-5193 0 1 0
chr16:4512591|4512888 hsa-miR-5572 1 0 0
chr16:4512591|4512888 hsa-miR-5704 0 1 0
chr16:4512591|4512888 hsa-miR-134-3p 1 0 0
chr16:4512591|4512888 hsa-miR-26b-3p 0 1 0
chr16:4512591|4512888 hsa-miR-4731-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6747-3p 0 1 0
chr16:4512591|4512888 hsa-miR-6836-3p 0 1 0
chr16:4512591|4512888 hsa-miR-6861-5p 1 0 0
chr16:4512591|4512888 hsa-miR-766-3p 1 1 0
chr16:4512591|4512888 hsa-miR-210-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6799-5p 1 0 0
chr16:4512591|4512888 hsa-miR-1225-3p 1 0 0
chr16:4512591|4512888 hsa-miR-6890-5p 1 1 0
chr16:4512591|4512888 hsa-miR-6875-3p 0 1 0
chr16:4512591|4512888 hsa-miR-6762-3p 0 1 0
chr16:4512591|4512888 hsa-miR-6842-3p 1 0 0
chr16:4512591|4512888 hsa-miR-1178-5p 0 1 0
chr16:4512591|4512888 hsa-miR-5589-5p 1 1 0
chr16:4512591|4512888 hsa-miR-6776-5p 1 0 0
chr16:4512591|4512888 hsa-miR-1915-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6742-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6748-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6793-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6796-5p 1 0 0
chr16:4512591|4512888 hsa-miR-185-3p 0 1 0
chr16:4512591|4512888 hsa-miR-6829-5p 0 1 0
chr16:4512591|4512888 hsa-miR-23a-5p 1 0 0
chr16:4512591|4512888 hsa-miR-3130-3p 0 1 0
chr16:4512591|4512888 hsa-miR-6881-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6782-5p 1 0 0
chr16:4512591|4512888 hsa-miR-4793-3p 0 1 0
chr16:4512591|4512888 hsa-miR-6882-3p 1 1 0
chr16:4512591|4512888 hsa-miR-6884-3p 0 1 0
chr16:4512591|4512888 hsa-miR-1226-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6763-3p 1 0 0
chr16:4512591|4512888 hsa-miR-3944-3p 1 0 0
chr16:4512591|4512888 hsa-miR-1229-5p 1 0 0
chr16:4512591|4512888 hsa-miR-4640-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6514-3p 1 1 0
chr16:4512591|4512888 hsa-miR-5001-3p 0 1 0
chr16:4512591|4512888 hsa-miR-4690-5p 0 1 0
chr16:4512591|4512888 hsa-miR-485-5p 1 0 0
chr16:4512591|4512888 hsa-miR-1266-3p 0 1 0
chr16:4512591|4512888 hsa-miR-1225-5p 1 0 0
chr16:4512591|4512888 hsa-miR-2276-5p 0 1 0
chr16:4512591|4512888 hsa-miR-4529-5p 0 1 0
chr16:4512591|4512888 hsa-miR-3151-3p 0 1 0
chr16:4512591|4512888 hsa-miR-1298-3p 0 1 0
chr16:4512591|4512888 hsa-miR-4650-5p 0 1 0
chr16:4512591|4512888 hsa-miR-1233-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6769b-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6787-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6812-5p 1 0 0
chr16:4512591|4512888 hsa-miR-5001-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6726-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6737-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6752-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6756-5p 1 1 0
chr16:4512591|4512888 hsa-miR-6769a-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6803-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6819-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6851-5p 1 0 0
chr16:4512591|4512888 hsa-miR-10401-5p 1 1 0
chr16:4512591|4512888 hsa-miR-3620-5p 1 0 0
chr16:4512591|4512888 hsa-miR-5189-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6780b-5p 1 0 0
chr16:4512591|4512888 hsa-miR-4725-3p 1 0 0
chr16:4512591|4512888 hsa-miR-4745-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6846-5p 1 1 0
chr16:4512591|4512888 hsa-miR-6848-5p 1 1 0
chr16:4512591|4512888 hsa-miR-3940-5p 1 0 0
chr16:4512591|4512888 hsa-miR-377-5p 0 1 0
chr16:4512591|4512888 hsa-miR-6855-5p 1 0 0
chr16:4512591|4512888 hsa-miR-6791-3p 0 1 0
chr16:4512591|4512888 hsa-miR-324-3p 0 1 0
chr16:4512591|4512888 hsa-miR-6766-5p 0 1 0
chr16:4512591|4512888 hsa-miR-2682-3p 0 1 0
chr16:4512591|4512888 hsa-miR-7107-3p 0 1 0
chr16:4512591|4512888 hsa-miR-6893-3p 1 1 0
chr16:4512591|4512888 hsa-miR-6801-3p 1 1 0
chr16:4512591|4512888 hsa-miR-6829-3p 1 1 0
chr16:4512591|4512888 hsa-miR-3085-3p 0 1 0
chr16:4512591|4512888 hsa-miR-6876-3p 0 1 0
chr16:4512591|4512888 hsa-miR-3619-5p 0 1 0
chr16:4512591|4512888 hsa-miR-6781-3p 0 1 0
chr16:4512591|4512888 hsa-miR-5699-3p 0 1 0
chr16:4512591|4512888 hsa-miR-9983-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:4512591|4512888
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MQLGHVCVTSLKSLMRQGIRQQPRSHLNQRQGRTG
Nucleotide Sequence TTGCAGCTGGGGCATGTGTGCGTCACATCCTTGAAGTCATTGATGAGGCAGGGGATCAGGCAGCAGCCCAGATCACATCTGAATCAGAGACAGGGAAGAACAGGCTGA

CircID chr16:4512591|4512888
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MLRRRQRQPVDPGAAPTLPVPTPPTP
Nucleotide Sequence CTGCTGCGGAGGAGGCAGAGGCAGCCAGTTGACCCTGGTGCAGCCCCCACCCTACCAGTGCCCACACCACCTACCCCATGA

CircID chr16:4512591|4512888
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MTLVQPPPYQCPHHLPHEATEETQHEIHQANLVGDLGGDGLLAVGTHR
Nucleotide Sequence TTGACCCTGGTGCAGCCCCCACCCTACCAGTGCCCACACCACCTACCCCATGAAGCAACAGAAGAAACCCAGCACGAAATTCATCAAGCCAATCTCGTAGGAGATCTTGGTGGTGATGGCCTGCTGGCAGTGGGGACACACCGT

CircID chr16:4512591|4512888
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MVGWGLHQGQLAASASSAAGLSLFFPVSDSDVIWAAA
Nucleotide Sequence CTGGTAGGGTGGGGGCTGCACCAGGGTCAACTGGCTGCCTCTGCCTCCTCCGCAGCAGGCCTCAGCCTGTTCTTCCCTGTCTCTGATTCAGATGTGATCTGGGCTGCTGCCTGA

CircID chr16:4512591|4512888
ORF Type ORF5
Protein Length 61
Nucleotide Length 186
Protein Sequence MPAGHHHQDLLRDWLDEFRAGFLLLLHGVGGVGTGRVGAAPGSTGCLCLLRSRPQPVLPCL
Nucleotide Sequence CTGCCAGCAGGCCATCACCACCAAGATCTCCTACGAGATTGGCTTGATGAATTTCGTGCTGGGTTTCTTCTGTTGCTTCATGGGGTAGGTGGTGTGGGCACTGGTAGGGTGGGGGCTGCACCAGGGTCAACTGGCTGCCTCTGCCTCCTCCGCAGCAGGCCTCAGCCTGTTCTTCCCTGTCTCTGA

CircID chr16:4512591|4512888
ORF Type ORF6
Protein Length 28
Nucleotide Length 84
Protein Sequence MGCCLIPCLINDFKDVTHTCPSCKAYIY
Nucleotide Sequence CTGGGCTGCTGCCTGATCCCCTGCCTCATCAATGACTTCAAGGATGTGACGCACACATGCCCCAGCTGCAAAGCCTACATCTAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites