CircRNA Information

General Information
circRNA Basic Information
CircID chr16:4795774|4796033
Strand +
CircType exon
Host Gene ENSG00000267795.4;
Algorism CIRI2;
Sequence CTTCCTGGGGCTTTCCCTGCGGGGCCCGGGGGAGCTGCAGCAGCAGCAGTGGGCGACGACCAGCAGCAGCAGGAGCAGCACGGTGCCTGGGGACAGGACAGGCGTCCAGGTGTGGCCCCAACCTGGAGCCCAGGGCAGGGGGCTGGGAGGACCCAGAGGCCACAGCCACACTTACCCATGAAGGTGAGGAAAACAATGAAGGCAACAGTGTCCCATGTGGACTGGAAAAACTGGTGGCTCTTCAGTCTCCCCAGGACTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:4795774|4796033 hsa-miR-205-5p 0 0 1
chr16:4795774|4796033 hsa-miR-205-3p 0 0 1
chr16:4795774|4796033 hsa-miR-370-5p 0 0 1
chr16:4795774|4796033 hsa-miR-370-3p 0 0 1
chr16:4795774|4796033 hsa-miR-326 0 1 1
chr16:4795774|4796033 hsa-miR-555 0 0 1
chr16:4795774|4796033 hsa-miR-595 0 1 1
chr16:4795774|4796033 hsa-miR-619-5p 0 0 1
chr16:4795774|4796033 hsa-miR-619-3p 0 0 1
chr16:4795774|4796033 hsa-miR-1301-5p 0 0 1
chr16:4795774|4796033 hsa-miR-1301-3p 0 0 1
chr16:4795774|4796033 hsa-miR-874-5p 0 0 1
chr16:4795774|4796033 hsa-miR-874-3p 0 0 1
chr16:4795774|4796033 hsa-miR-939-5p 0 0 1
chr16:4795774|4796033 hsa-miR-939-3p 0 0 1
chr16:4795774|4796033 hsa-miR-1181 1 0 1
chr16:4795774|4796033 hsa-miR-1228-5p 0 0 1
chr16:4795774|4796033 hsa-miR-1228-3p 0 0 1
chr16:4795774|4796033 hsa-miR-1238-5p 0 0 1
chr16:4795774|4796033 hsa-miR-1238-3p 0 0 1
chr16:4795774|4796033 hsa-miR-663b 0 0 1
chr16:4795774|4796033 hsa-miR-1208 0 0 1
chr16:4795774|4796033 hsa-miR-145-5p 0 0 1
chr16:4795774|4796033 hsa-miR-296-5p 0 0 1
chr16:4795774|4796033 hsa-miR-146b-3p 0 0 1
chr16:4795774|4796033 hsa-miR-1184 0 0 1
chr16:4795774|4796033 hsa-miR-330-5p 0 0 1
chr16:4795774|4796033 hsa-miR-1302 0 0 1
chr16:4795774|4796033 hsa-miR-455-3p 0 1 1
chr16:4795774|4796033 hsa-miR-1308 0 0 1
chr16:4795774|4796033 hsa-miR-644 0 0 1
chr16:4795774|4796033 hsa-miR-138 0 0 1
chr16:4795774|4796033 hsa-miR-614 0 1 0
chr16:4795774|4796033 hsa-miR-3153 0 1 0
chr16:4795774|4796033 hsa-miR-4313 0 1 0
chr16:4795774|4796033 hsa-miR-4269 0 1 0
chr16:4795774|4796033 hsa-miR-4328 0 1 0
chr16:4795774|4796033 hsa-miR-3621 1 0 0
chr16:4795774|4796033 hsa-miR-3943 0 1 0
chr16:4795774|4796033 hsa-miR-4449 1 0 0
chr16:4795774|4796033 hsa-miR-8089 1 0 0
chr16:4795774|4796033 hsa-miR-6749-3p 1 1 0
chr16:4795774|4796033 hsa-miR-18a-3p 0 1 0
chr16:4795774|4796033 hsa-miR-4665-3p 1 0 0
chr16:4795774|4796033 hsa-miR-3150a-3p 0 1 0
chr16:4795774|4796033 hsa-miR-6861-5p 1 1 0
chr16:4795774|4796033 hsa-miR-6825-5p 1 1 0
chr16:4795774|4796033 hsa-miR-6894-5p 1 0 0
chr16:4795774|4796033 hsa-miR-3692-5p 0 1 0
chr16:4795774|4796033 hsa-miR-7851-3p 0 1 0
chr16:4795774|4796033 hsa-miR-6840-5p 1 1 0
chr16:4795774|4796033 hsa-miR-4474-3p 0 1 0
chr16:4795774|4796033 hsa-miR-6793-5p 1 1 0
chr16:4795774|4796033 hsa-miR-6765-3p 0 1 0
chr16:4795774|4796033 hsa-miR-6735-3p 1 1 0
chr16:4795774|4796033 hsa-miR-6852-5p 1 1 0
chr16:4795774|4796033 hsa-miR-6772-3p 1 1 0
chr16:4795774|4796033 hsa-miR-6763-3p 1 0 0
chr16:4795774|4796033 hsa-miR-3944-3p 1 0 0
chr16:4795774|4796033 hsa-miR-4717-3p 1 1 0
chr16:4795774|4796033 hsa-miR-6878-3p 0 1 0
chr16:4795774|4796033 hsa-miR-3648 1 0 0
chr16:4795774|4796033 hsa-miR-6736-3p 0 1 0
chr16:4795774|4796033 hsa-miR-6824-5p 1 0 0
chr16:4795774|4796033 hsa-miR-4707-5p 1 0 0
chr16:4795774|4796033 hsa-miR-873-3p 1 1 0
chr16:4795774|4796033 hsa-miR-670-3p 0 1 0
chr16:4795774|4796033 hsa-miR-106b-3p 1 0 0
chr16:4795774|4796033 hsa-miR-2355-5p 0 1 0
chr16:4795774|4796033 hsa-miR-331-3p 1 0 0
chr16:4795774|4796033 hsa-miR-6748-3p 0 1 0
chr16:4795774|4796033 hsa-miR-5587-3p 0 1 0
chr16:4795774|4796033 hsa-miR-4423-5p 0 1 0
chr16:4795774|4796033 hsa-miR-1343-5p 1 0 0
chr16:4795774|4796033 hsa-miR-6763-5p 1 1 0
chr16:4795774|4796033 hsa-miR-10396a-3p 1 0 0
chr16:4795774|4796033 hsa-miR-10396b-3p 1 0 0
chr16:4795774|4796033 hsa-miR-6877-3p 1 0 0
chr16:4795774|4796033 hsa-miR-324-3p 0 1 0
chr16:4795774|4796033 hsa-miR-4667-5p 1 1 0
chr16:4795774|4796033 hsa-miR-6790-5p 0 1 0
chr16:4795774|4796033 hsa-miR-6791-5p 1 1 0
chr16:4795774|4796033 hsa-miR-6762-5p 0 1 0
chr16:4795774|4796033 hsa-miR-6893-3p 0 1 0
chr16:4795774|4796033 hsa-miR-4757-5p 0 1 0
chr16:4795774|4796033 hsa-miR-6792-3p 1 0 0
chr16:4795774|4796033 hsa-miR-6810-3p 0 1 0
chr16:4795774|4796033 hsa-miR-10400-3p 0 1 0
chr16:4795774|4796033 hsa-miR-10392-3p 1 1 0
chr16:4795774|4796033 hsa-miR-6744-3p 0 1 0
chr16:4795774|4796033 hsa-miR-412-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:4795774|4796033
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MKVRKTMKATVSHVDWKNWWLFSLPRT
Nucleotide Sequence ATGAAGGTGAGGAAAACAATGAAGGCAACAGTGTCCCATGTGGACTGGAAAAACTGGTGGCTCTTCAGTCTCCCCAGGACT
CircID chr16:4795774|4796033
ORF Type ORF2
Protein Length 58
Nucleotide Length 177
Protein Sequence MGLSLRGPGELQQQQWATTSSSRSSTVPGDRTGVQVWPQPGAQGRGLGGPRGHSHTYP
Nucleotide Sequence CTGGGGCTTTCCCTGCGGGGCCCGGGGGAGCTGCAGCAGCAGCAGTGGGCGACGACCAGCAGCAGCAGGAGCAGCACGGTGCCTGGGGACAGGACAGGCGTCCAGGTGTGGCCCCAACCTGGAGCCCAGGGCAGGGGGCTGGGAGGACCCAGAGGCCACAGCCACACTTACCCATGA
CircID chr16:4795774|4796033
ORF Type ORF3
Protein Length 58
Nucleotide Length 174
Protein Sequence MGTGQASRCGPNLEPRAGGWEDPEATATLTHEGEENNEGNSVPCGLEKLVALQSPQDF
Nucleotide Sequence CTGGGGACAGGACAGGCGTCCAGGTGTGGCCCCAACCTGGAGCCCAGGGCAGGGGGCTGGGAGGACCCAGAGGCCACAGCCACACTTACCCATGAAGGTGAGGAAAACAATGAAGGCAACAGTGTCCCATGTGGACTGGAAAAACTGGTGGCTCTTCAGTCTCCCCAGGACTTC
CircID chr16:4795774|4796033
ORF Type ORF4
Protein Length 84
Nucleotide Length 252
Protein Sequence MGRLKSHQFFQSTWDTVAFIVFLTFMGKCGCGLWVLPAPCPGLQVGATPGRLSCPQAPCCSCCCWSSPTAAAAAPPGPAGKAPG
Nucleotide Sequence CTGGGGAGACTGAAGAGCCACCAGTTTTTCCAGTCCACATGGGACACTGTTGCCTTCATTGTTTTCCTCACCTTCATGGGTAAGTGTGGCTGTGGCCTCTGGGTCCTCCCAGCCCCCTGCCCTGGGCTCCAGGTTGGGGCCACACCTGGACGCCTGTCCTGTCCCCAGGCACCGTGCTGCTCCTGCTGCTGCTGGTCGTCGCCCACTGCTGCTGCTGCAGCTCCCCCGGGCCCCGCAGGGAAAGCCCCAGGA
CircID chr16:4795774|4796033
ORF Type ORF5
Protein Length 69
Nucleotide Length 207
Protein Sequence MLPSLFSSPSWVSVAVASGSSQPPALGSRLGPHLDACPVPRHRAAPAAAGRRPLLLLQLPRAPQGKPQE
Nucleotide Sequence CTGTTGCCTTCATTGTTTTCCTCACCTTCATGGGTAAGTGTGGCTGTGGCCTCTGGGTCCTCCCAGCCCCCTGCCCTGGGCTCCAGGTTGGGGCCACACCTGGACGCCTGTCCTGTCCCCAGGCACCGTGCTGCTCCTGCTGCTGCTGGTCGTCGCCCACTGCTGCTGCTGCAGCTCCCCCGGGCCCCGCAGGGAAAGCCCCAGGAA
CircID chr16:4795774|4796033
ORF Type ORF6
Protein Length 55
Nucleotide Length 165
Protein Sequence MWPLGPPSPLPWAPGWGHTWTPVLSPGTVLLLLLLVVAHCCCCSSPGPRRESPRK
Nucleotide Sequence CTGTGGCCTCTGGGTCCTCCCAGCCCCCTGCCCTGGGCTCCAGGTTGGGGCCACACCTGGACGCCTGTCCTGTCCCCAGGCACCGTGCTGCTCCTGCTGCTGCTGGTCGTCGCCCACTGCTGCTGCTGCAGCTCCCCCGGGCCCCGCAGGGAAAGCCCCAGGAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab