CircRNA Information

General Information
circRNA Basic Information
CircID chr16:48186146|48186256
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence TGAGAGAGCAGGTGCCACAATTAATCCAATATTCCAGCTAACTGAGCACATACCGTCTCCCAAATGTGTGCCCAAGTCTTACCCAGGCTTCAAGGCCAGCTCAGATGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:48186146|48186256 hsa-miR-555 0 0 1
chr16:48186146|48186256 hsa-miR-558 0 0 1
chr16:48186146|48186256 hsa-miR-635 0 1 1
chr16:48186146|48186256 hsa-miR-661 0 1 1
chr16:48186146|48186256 hsa-miR-935 0 0 1
chr16:48186146|48186256 hsa-miR-127-5p 0 0 1
chr16:48186146|48186256 hsa-miR-455-5p 0 0 1
chr16:48186146|48186256 hsa-miR-499-5p 0 0 1
chr16:48186146|48186256 hsa-miR-3147 1 0 0
chr16:48186146|48186256 hsa-miR-3945 1 0 0
chr16:48186146|48186256 hsa-miR-4487 1 1 0
chr16:48186146|48186256 hsa-miR-4507 1 0 0
chr16:48186146|48186256 hsa-miR-1587 1 0 0
chr16:48186146|48186256 hsa-miR-4647 1 0 0
chr16:48186146|48186256 hsa-miR-4682 1 1 0
chr16:48186146|48186256 hsa-miR-5787 1 0 0
chr16:48186146|48186256 hsa-miR-12126 0 1 0
chr16:48186146|48186256 hsa-miR-6765-5p 1 0 0
chr16:48186146|48186256 hsa-miR-6861-5p 0 1 0
chr16:48186146|48186256 hsa-miR-6089 1 0 0
chr16:48186146|48186256 hsa-miR-24-3p 1 1 0
chr16:48186146|48186256 hsa-miR-6842-3p 1 0 0
chr16:48186146|48186256 hsa-miR-3156-5p 1 0 0
chr16:48186146|48186256 hsa-miR-1229-5p 1 1 0
chr16:48186146|48186256 hsa-miR-30c-2-3p 0 1 0
chr16:48186146|48186256 hsa-miR-4446-3p 1 0 0
chr16:48186146|48186256 hsa-miR-1225-5p 1 0 0
chr16:48186146|48186256 hsa-miR-6804-3p 0 1 0
chr16:48186146|48186256 hsa-miR-3200-5p 0 1 0
chr16:48186146|48186256 hsa-miR-6505-5p 0 1 0
chr16:48186146|48186256 hsa-miR-4797-3p 1 0 0
chr16:48186146|48186256 hsa-miR-6774-5p 1 1 0
chr16:48186146|48186256 hsa-miR-6779-5p 1 0 0
chr16:48186146|48186256 hsa-miR-6788-5p 0 1 0
chr16:48186146|48186256 hsa-miR-3620-5p 1 0 0
chr16:48186146|48186256 hsa-miR-5189-5p 1 0 0
chr16:48186146|48186256 hsa-miR-642b-3p 0 1 0
chr16:48186146|48186256 hsa-miR-30c-1-3p 1 1 0
chr16:48186146|48186256 hsa-miR-4665-5p 1 0 0
chr16:48186146|48186256 hsa-miR-642a-3p 0 1 0
chr16:48186146|48186256 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:48186146|48186256
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MGTHLGDGMCSVSWNIGLIVAPALS
Nucleotide Sequence TTGGGCACACATTTGGGAGACGGTATGTGCTCAGTTAGCTGGAATATTGGATTAATTGTGGCACCTGCTCTCTCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites