CircRNA Information

General Information
circRNA Basic Information
CircID chr16:4885667|4885779
Strand -
CircType exon
Host Gene ENSG00000118898.14;
Algorism CIRI2;
Sequence CTCCTTGACCACGTACTCCTGCCCCCCGTCTCTGGTCTCCTGCTCCAGGGCACGCAGCTGCAGCTGCAGTGCCTCCAGCTCCTCCTGCAGCAGCTGGTTCTTGTGCTGCTCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:4885667|4885779 hsa-miR-15a-5p 0 0 1
chr16:4885667|4885779 hsa-miR-15a-3p 0 0 1
chr16:4885667|4885779 hsa-miR-15b-5p 0 0 1
chr16:4885667|4885779 hsa-miR-15b-3p 0 0 1
chr16:4885667|4885779 hsa-miR-195-5p 0 0 1
chr16:4885667|4885779 hsa-miR-195-3p 0 0 1
chr16:4885667|4885779 hsa-miR-424-5p 0 0 1
chr16:4885667|4885779 hsa-miR-424-3p 0 0 1
chr16:4885667|4885779 hsa-miR-497-5p 0 0 1
chr16:4885667|4885779 hsa-miR-497-3p 0 0 1
chr16:4885667|4885779 hsa-miR-650 0 0 1
chr16:4885667|4885779 hsa-miR-1301-5p 0 0 1
chr16:4885667|4885779 hsa-miR-1301-3p 0 0 1
chr16:4885667|4885779 hsa-miR-765 0 1 1
chr16:4885667|4885779 hsa-miR-874-5p 0 0 1
chr16:4885667|4885779 hsa-miR-874-3p 0 0 1
chr16:4885667|4885779 hsa-miR-708-5p 0 0 1
chr16:4885667|4885779 hsa-miR-708-3p 0 0 1
chr16:4885667|4885779 hsa-miR-1205 0 0 1
chr16:4885667|4885779 hsa-miR-1286 0 0 1
chr16:4885667|4885779 hsa-miR-486-3p 1 1 1
chr16:4885667|4885779 hsa-miR-146b-3p 0 0 1
chr16:4885667|4885779 hsa-miR-1184 0 0 1
chr16:4885667|4885779 hsa-miR-483-5p 1 1 1
chr16:4885667|4885779 hsa-miR-28-5p 0 0 1
chr16:4885667|4885779 hsa-miR-509-3-5p 0 1 1
chr16:4885667|4885779 hsa-miR-509-5p 0 1 1
chr16:4885667|4885779 hsa-miR-548b-3p 0 1 1
chr16:4885667|4885779 hsa-miR-16 0 0 1
chr16:4885667|4885779 hsa-miR-637 1 0 0
chr16:4885667|4885779 hsa-miR-663a 1 0 0
chr16:4885667|4885779 hsa-miR-658 1 0 0
chr16:4885667|4885779 hsa-miR-1202 1 0 0
chr16:4885667|4885779 hsa-miR-3141 1 0 0
chr16:4885667|4885779 hsa-miR-4298 1 0 0
chr16:4885667|4885779 hsa-miR-3937 1 0 0
chr16:4885667|4885779 hsa-miR-4428 1 0 0
chr16:4885667|4885779 hsa-miR-3135b 0 1 0
chr16:4885667|4885779 hsa-miR-4466 1 0 0
chr16:4885667|4885779 hsa-miR-4488 1 0 0
chr16:4885667|4885779 hsa-miR-378i 1 0 0
chr16:4885667|4885779 hsa-miR-3960 1 0 0
chr16:4885667|4885779 hsa-miR-4688 1 1 0
chr16:4885667|4885779 hsa-miR-4739 1 0 0
chr16:4885667|4885779 hsa-miR-5047 0 1 0
chr16:4885667|4885779 hsa-miR-5090 1 0 0
chr16:4885667|4885779 hsa-miR-5787 1 0 0
chr16:4885667|4885779 hsa-miR-6081 1 1 0
chr16:4885667|4885779 hsa-miR-6127 1 0 0
chr16:4885667|4885779 hsa-miR-6165 1 1 0
chr16:4885667|4885779 hsa-miR-7704 1 0 0
chr16:4885667|4885779 hsa-miR-8072 1 0 0
chr16:4885667|4885779 hsa-miR-8089 1 0 0
chr16:4885667|4885779 hsa-miR-211-3p 1 0 0
chr16:4885667|4885779 hsa-miR-4731-5p 1 0 0
chr16:4885667|4885779 hsa-miR-4433a-3p 1 1 0
chr16:4885667|4885779 hsa-miR-6765-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6894-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6510-5p 1 1 0
chr16:4885667|4885779 hsa-miR-139-3p 1 0 0
chr16:4885667|4885779 hsa-miR-4786-5p 1 1 0
chr16:4885667|4885779 hsa-miR-4768-3p 1 1 0
chr16:4885667|4885779 hsa-miR-6089 1 0 0
chr16:4885667|4885779 hsa-miR-4695-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6746-5p 1 0 0
chr16:4885667|4885779 hsa-miR-4722-5p 1 1 0
chr16:4885667|4885779 hsa-miR-593-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6721-5p 1 1 0
chr16:4885667|4885779 hsa-miR-7845-5p 1 0 0
chr16:4885667|4885779 hsa-miR-3151-5p 1 0 0
chr16:4885667|4885779 hsa-miR-503-5p 1 1 0
chr16:4885667|4885779 hsa-miR-6881-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6874-5p 1 1 0
chr16:4885667|4885779 hsa-miR-6821-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6835-5p 1 0 0
chr16:4885667|4885779 hsa-miR-7109-5p 1 0 0
chr16:4885667|4885779 hsa-miR-1229-5p 1 0 0
chr16:4885667|4885779 hsa-miR-4640-5p 1 0 0
chr16:4885667|4885779 hsa-miR-1908-5p 1 0 0
chr16:4885667|4885779 hsa-miR-1228-5p 1 0 0
chr16:4885667|4885779 hsa-miR-92b-5p 1 0 0
chr16:4885667|4885779 hsa-miR-4787-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6800-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6781-5p 1 0 0
chr16:4885667|4885779 hsa-miR-4776-5p 1 0 0
chr16:4885667|4885779 hsa-miR-7112-5p 1 0 0
chr16:4885667|4885779 hsa-miR-423-5p 1 0 0
chr16:4885667|4885779 hsa-miR-16-5p 0 1 0
chr16:4885667|4885779 hsa-miR-1207-5p 1 0 0
chr16:4885667|4885779 hsa-miR-4763-3p 1 0 0
chr16:4885667|4885779 hsa-miR-6787-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6816-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6870-5p 1 0 0
chr16:4885667|4885779 hsa-miR-5001-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6726-5p 1 1 0
chr16:4885667|4885779 hsa-miR-6743-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6769a-5p 1 0 0
chr16:4885667|4885779 hsa-miR-11181-3p 1 1 0
chr16:4885667|4885779 hsa-miR-6722-3p 1 0 0
chr16:4885667|4885779 hsa-miR-6808-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6879-5p 1 0 0
chr16:4885667|4885779 hsa-miR-7111-5p 1 0 0
chr16:4885667|4885779 hsa-miR-4728-5p 1 0 0
chr16:4885667|4885779 hsa-miR-5196-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6780b-5p 1 0 0
chr16:4885667|4885779 hsa-miR-10396b-5p 1 0 0
chr16:4885667|4885779 hsa-miR-1237-5p 1 0 0
chr16:4885667|4885779 hsa-miR-1909-3p 1 0 0
chr16:4885667|4885779 hsa-miR-328-5p 1 1 0
chr16:4885667|4885779 hsa-miR-4725-3p 1 0 0
chr16:4885667|4885779 hsa-miR-6738-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6794-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6795-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6846-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6848-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6887-5p 1 0 0
chr16:4885667|4885779 hsa-miR-4436b-3p 1 0 0
chr16:4885667|4885779 hsa-miR-4697-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6885-5p 1 0 0
chr16:4885667|4885779 hsa-miR-939-5p 1 1 0
chr16:4885667|4885779 hsa-miR-6731-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6758-5p 1 0 0
chr16:4885667|4885779 hsa-miR-4665-5p 1 0 0
chr16:4885667|4885779 hsa-miR-4747-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6791-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6822-5p 1 0 0
chr16:4885667|4885779 hsa-miR-6529-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:4885667|4885779
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MPPVSGLLLQGTQLQLQCLQLLLQQLVLVLL
Nucleotide Sequence CTGCCCCCCGTCTCTGGTCTCCTGCTCCAGGGCACGCAGCTGCAGCTGCAGTGCCTCCAGCTCCTCCTGCAGCAGCTGGTTCTTGTGCTGCTC
CircID chr16:4885667|4885779
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MTTYSCPPSLVSCSRARSCSCSASSSSCSSWFLCCS
Nucleotide Sequence TTGACCACGTACTCCTGCCCCCCGTCTCTGGTCTCCTGCTCCAGGGCACGCAGCTGCAGCTGCAGTGCCTCCAGCTCCTCCTGCAGCAGCTGGTTCTTGTGCTGCTCC
CircID chr16:4885667|4885779
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MLQEELEALQLQLRALEQETRDGGQEYVVKE
Nucleotide Sequence CTGCTGCAGGAGGAGCTGGAGGCACTGCAGCTGCAGCTGCGTGCCCTGGAGCAGGAGACCAGAGACGGGGGGCAGGAGTACGTGGTCAAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab