CircRNA Information

General Information
circRNA Basic Information
CircID chr16:50798863|50799090
Strand +
CircType exon
Host Gene ENSG00000083799.16;
Algorism CIRI2;
Sequence CAGCAGGCACATAAGCCCCTGTGCCATGCAGCCCAGCCCCAACTATGTGCCTCTTGACAAACCAGGCTGTGCTGAAGCACAGAACAGTAGGGGGCTACCCAGAGGGAGCCAGGACAGACAGGTGCAGGGGAAACCTTCCTGCTGCCTCATGACATGCAGAAGCAGGGAAGGACGCAGCCTCCCCAGGAACCACCAGAGCTGGCCCTGGCATCCCTTAATGAGCACTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:50798863|50799090 hsa-miR-183-5p 0 0 1
chr16:50798863|50799090 hsa-miR-183-3p 0 0 1
chr16:50798863|50799090 hsa-miR-214-5p 0 0 1
chr16:50798863|50799090 hsa-miR-214-3p 0 0 1
chr16:50798863|50799090 hsa-miR-149-5p 0 0 1
chr16:50798863|50799090 hsa-miR-149-3p 0 0 1
chr16:50798863|50799090 hsa-miR-370-5p 0 0 1
chr16:50798863|50799090 hsa-miR-370-3p 0 0 1
chr16:50798863|50799090 hsa-miR-326 0 0 1
chr16:50798863|50799090 hsa-miR-335-5p 0 0 1
chr16:50798863|50799090 hsa-miR-335-3p 0 0 1
chr16:50798863|50799090 hsa-miR-452-5p 0 0 1
chr16:50798863|50799090 hsa-miR-452-3p 0 0 1
chr16:50798863|50799090 hsa-miR-604 0 0 1
chr16:50798863|50799090 hsa-miR-636 0 0 1
chr16:50798863|50799090 hsa-miR-939-5p 0 0 1
chr16:50798863|50799090 hsa-miR-939-3p 0 0 1
chr16:50798863|50799090 hsa-miR-1827 0 1 1
chr16:50798863|50799090 hsa-miR-485-5p 0 0 1
chr16:50798863|50799090 hsa-miR-331-3p 0 0 1
chr16:50798863|50799090 hsa-miR-876-3p 0 0 1
chr16:50798863|50799090 hsa-miR-455-5p 0 0 1
chr16:50798863|50799090 hsa-miR-330-5p 0 0 1
chr16:50798863|50799090 hsa-miR-1274a 0 0 1
chr16:50798863|50799090 hsa-miR-323-5p 0 0 1
chr16:50798863|50799090 hsa-miR-550 0 0 1
chr16:50798863|50799090 hsa-miR-642 0 0 1
chr16:50798863|50799090 hsa-miR-220c 0 0 1
chr16:50798863|50799090 hsa-miR-218 0 0 1
chr16:50798863|50799090 hsa-miR-544 0 0 1
chr16:50798863|50799090 hsa-miR-623 1 0 0
chr16:50798863|50799090 hsa-miR-637 1 0 0
chr16:50798863|50799090 hsa-miR-762 1 0 0
chr16:50798863|50799090 hsa-miR-892b 1 1 0
chr16:50798863|50799090 hsa-miR-760 1 0 0
chr16:50798863|50799090 hsa-miR-1202 1 0 0
chr16:50798863|50799090 hsa-miR-1976 1 0 0
chr16:50798863|50799090 hsa-miR-3197 1 0 0
chr16:50798863|50799090 hsa-miR-4259 0 1 0
chr16:50798863|50799090 hsa-miR-4267 0 1 0
chr16:50798863|50799090 hsa-miR-3714 1 0 0
chr16:50798863|50799090 hsa-miR-3907 1 0 0
chr16:50798863|50799090 hsa-miR-4421 0 1 0
chr16:50798863|50799090 hsa-miR-4456 0 1 0
chr16:50798863|50799090 hsa-miR-4469 0 1 0
chr16:50798863|50799090 hsa-miR-4492 1 1 0
chr16:50798863|50799090 hsa-miR-4498 1 0 0
chr16:50798863|50799090 hsa-miR-4505 1 1 0
chr16:50798863|50799090 hsa-miR-4507 1 0 0
chr16:50798863|50799090 hsa-miR-4508 1 0 0
chr16:50798863|50799090 hsa-miR-1587 1 1 0
chr16:50798863|50799090 hsa-miR-4651 1 0 0
chr16:50798863|50799090 hsa-miR-4656 1 0 0
chr16:50798863|50799090 hsa-miR-4660 1 1 0
chr16:50798863|50799090 hsa-miR-4688 1 0 0
chr16:50798863|50799090 hsa-miR-4741 1 0 0
chr16:50798863|50799090 hsa-miR-5572 1 0 0
chr16:50798863|50799090 hsa-miR-5787 1 1 0
chr16:50798863|50799090 hsa-miR-6069 1 0 0
chr16:50798863|50799090 hsa-miR-6085 1 0 0
chr16:50798863|50799090 hsa-miR-6765-5p 0 1 0
chr16:50798863|50799090 hsa-miR-6825-5p 1 0 0
chr16:50798863|50799090 hsa-miR-27a-5p 0 1 0
chr16:50798863|50799090 hsa-miR-6728-5p 0 1 0
chr16:50798863|50799090 hsa-miR-6089 1 0 0
chr16:50798863|50799090 hsa-miR-6757-5p 1 1 0
chr16:50798863|50799090 hsa-miR-185-3p 1 1 0
chr16:50798863|50799090 hsa-miR-6829-5p 1 1 0
chr16:50798863|50799090 hsa-miR-23a-5p 1 1 0
chr16:50798863|50799090 hsa-miR-942-5p 0 1 0
chr16:50798863|50799090 hsa-miR-5006-5p 1 1 0
chr16:50798863|50799090 hsa-miR-6763-3p 1 0 0
chr16:50798863|50799090 hsa-miR-1909-5p 1 0 0
chr16:50798863|50799090 hsa-miR-3944-3p 1 0 0
chr16:50798863|50799090 hsa-miR-4786-3p 1 0 0
chr16:50798863|50799090 hsa-miR-6784-5p 1 0 0
chr16:50798863|50799090 hsa-miR-4640-5p 1 0 0
chr16:50798863|50799090 hsa-miR-6753-5p 1 0 0
chr16:50798863|50799090 hsa-miR-7113-3p 1 0 0
chr16:50798863|50799090 hsa-miR-296-3p 1 0 0
chr16:50798863|50799090 hsa-miR-6501-5p 1 0 0
chr16:50798863|50799090 hsa-miR-4743-5p 1 0 0
chr16:50798863|50799090 hsa-miR-4446-3p 1 0 0
chr16:50798863|50799090 hsa-miR-6824-5p 1 1 0
chr16:50798863|50799090 hsa-miR-3120-5p 0 1 0
chr16:50798863|50799090 hsa-miR-383-3p 1 0 0
chr16:50798863|50799090 hsa-miR-6734-3p 0 1 0
chr16:50798863|50799090 hsa-miR-4763-3p 1 0 0
chr16:50798863|50799090 hsa-miR-6816-5p 1 0 0
chr16:50798863|50799090 hsa-miR-5001-5p 1 1 0
chr16:50798863|50799090 hsa-miR-6743-5p 1 0 0
chr16:50798863|50799090 hsa-miR-6756-5p 1 0 0
chr16:50798863|50799090 hsa-miR-6803-5p 1 0 0
chr16:50798863|50799090 hsa-miR-6813-5p 1 1 0
chr16:50798863|50799090 hsa-miR-6751-5p 1 0 0
chr16:50798863|50799090 hsa-miR-3620-5p 1 1 0
chr16:50798863|50799090 hsa-miR-6836-5p 1 0 0
chr16:50798863|50799090 hsa-miR-4685-5p 1 1 0
chr16:50798863|50799090 hsa-miR-4726-5p 1 0 0
chr16:50798863|50799090 hsa-miR-6846-5p 1 0 0
chr16:50798863|50799090 hsa-miR-6848-5p 1 0 0
chr16:50798863|50799090 hsa-miR-6858-5p 1 0 0
chr16:50798863|50799090 hsa-miR-3085-5p 1 0 0
chr16:50798863|50799090 hsa-miR-3940-5p 1 0 0
chr16:50798863|50799090 hsa-miR-6799-3p 1 0 0
chr16:50798863|50799090 hsa-miR-5008-3p 0 1 0
chr16:50798863|50799090 hsa-miR-6855-5p 1 1 0
chr16:50798863|50799090 hsa-miR-7107-3p 0 1 0
chr16:50798863|50799090 hsa-miR-6801-3p 0 1 0
chr16:50798863|50799090 hsa-miR-6805-3p 1 0 0
chr16:50798863|50799090 hsa-miR-6810-3p 1 1 0
chr16:50798863|50799090 hsa-miR-6837-5p 1 1 0
chr16:50798863|50799090 hsa-miR-4756-5p 1 0 0
chr16:50798863|50799090 hsa-miR-6876-3p 0 1 0
chr16:50798863|50799090 hsa-miR-3619-5p 0 1 0
chr16:50798863|50799090 hsa-miR-5195-3p 1 0 0
chr16:50798863|50799090 hsa-miR-6737-3p 0 1 0
chr16:50798863|50799090 hsa-miR-4661-5p 1 0 0
chr16:50798863|50799090 hsa-miR-5699-3p 0 1 0
chr16:50798863|50799090 hsa-miR-6764-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:50798863|50799090
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MLPHDMQKQGRTQPPQEPPELALASLNEHS
Nucleotide Sequence CTGCTGCCTCATGACATGCAGAAGCAGGGAAGGACGCAGCCTCCCCAGGAACCACCAGAGCTGGCCCTGGCATCCCTTAATGAGCACTCC

CircID chr16:50798863|50799090
ORF Type ORF2
Protein Length 67
Nucleotide Length 201
Protein Sequence MQPSPNYVPLDKPGCAEAQNSRGLPRGSQDRQVQGKPSCCLMTCRSREGRSLPRNHQSWPWHPLMST
Nucleotide Sequence ATGCAGCCCAGCCCCAACTATGTGCCTCTTGACAAACCAGGCTGTGCTGAAGCACAGAACAGTAGGGGGCTACCCAGAGGGAGCCAGGACAGACAGGTGCAGGGGAAACCTTCCTGCTGCCTCATGACATGCAGAAGCAGGGAAGGACGCAGCCTCCCCAGGAACCACCAGAGCTGGCCCTGGCATCCCTTAATGAGCACT

CircID chr16:50798863|50799090
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MCLLTNQAVLKHRTVGGYPEGARTDRCRGNLPAAS
Nucleotide Sequence ATGTGCCTCTTGACAAACCAGGCTGTGCTGAAGCACAGAACAGTAGGGGGCTACCCAGAGGGAGCCAGGACAGACAGGTGCAGGGGAAACCTTCCTGCTGCCTCATGA

CircID chr16:50798863|50799090
ORF Type ORF4
Protein Length 47
Nucleotide Length 144
Protein Sequence MGRLRPSLLLHVMRQQEGFPCTCLSWLPLGSPLLFCASAQPGLSRGT
Nucleotide Sequence CTGGGGAGGCTGCGTCCTTCCCTGCTTCTGCATGTCATGAGGCAGCAGGAAGGTTTCCCCTGCACCTGTCTGTCCTGGCTCCCTCTGGGTAGCCCCCTACTGTTCTGTGCTTCAGCACAGCCTGGTTTGTCAAGAGGCACATAG

CircID chr16:50798863|50799090
ORF Type ORF5
Protein Length 38
Nucleotide Length 117
Protein Sequence MPGPALVVPGEAASFPASACHEAAGRFPLHLSVLAPSG
Nucleotide Sequence ATGCCAGGGCCAGCTCTGGTGGTTCCTGGGGAGGCTGCGTCCTTCCCTGCTTCTGCATGTCATGAGGCAGCAGGAAGGTTTCCCCTGCACCTGTCTGTCCTGGCTCCCTCTGGGTAG

CircID chr16:50798863|50799090
ORF Type ORF6
Protein Length 27
Nucleotide Length 81
Protein Sequence MCFSTAWFVKRHIVGAGLHGTGAYVPA
Nucleotide Sequence CTGTGCTTCAGCACAGCCTGGTTTGTCAAGAGGCACATAGTTGGGGCTGGGCTGCATGGCACAGGGGCTTATGTGCCTGCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites