CircNet

General Information

circRNA Basic Information

CircID	chr16:53453452\|53453765
Strand	+
CircType	exon
Host Gene	ENSG00000103479.13;
Algorism	CIRI2;
Sequence	TCTCTCCAAAGTTCCCAGGTTCTAGAAACCCAGTGAGATTTTCTTCTTTTCCCTTAAGGAGCTATGATGAAAGAAGAGATCCTTAAGTCGTCATGTTAAATCAAGTTTTTCTCCAGAAAACATTTTCACGTTATTTCTTTGCTACTTACAAACCTTTTTTTCATAAAGTTTCCTAATATAGGGTTTCCAGAAATGTTCCTTTATCCCCTTTGCTTCCAAAACTAGGCCATCATGTAAGGAACACAGTTTCTCAATGATACAAGGGGGGTCAGAGGAAGGTTTAGAATCTTTAGCATGAAAATCTTCAGATAAGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:53453452\|53453765	hsa-miR-216a-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-216a-3p	0	0	1
chr16:53453452\|53453765	hsa-miR-185-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-185-3p	0	0	1
chr16:53453452\|53453765	hsa-miR-539-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-539-3p	0	0	1
chr16:53453452\|53453765	hsa-miR-562	0	0	1
chr16:53453452\|53453765	hsa-miR-580-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-580-3p	0	0	1
chr16:53453452\|53453765	hsa-miR-620	0	0	1
chr16:53453452\|53453765	hsa-miR-629-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-629-3p	0	0	1
chr16:53453452\|53453765	hsa-miR-643	0	0	1
chr16:53453452\|53453765	hsa-miR-656-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-656-3p	0	0	1
chr16:53453452\|53453765	hsa-miR-892a	0	0	1
chr16:53453452\|53453765	hsa-miR-1236-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-1236-3p	0	0	1
chr16:53453452\|53453765	hsa-miR-1299	1	1	1
chr16:53453452\|53453765	hsa-miR-548g-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-548g-3p	0	0	1
chr16:53453452\|53453765	hsa-miR-1270	0	0	1
chr16:53453452\|53453765	hsa-miR-548p	0	0	1
chr16:53453452\|53453765	hsa-miR-1292-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-1292-3p	0	0	1
chr16:53453452\|53453765	hsa-miR-671-5p	1	0	1
chr16:53453452\|53453765	hsa-miR-490-3p	0	1	1
chr16:53453452\|53453765	hsa-miR-875-3p	0	0	1
chr16:53453452\|53453765	hsa-miR-518d-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-519b-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-519c-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-520c-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-1300	0	0	1
chr16:53453452\|53453765	hsa-miR-516b	0	0	1
chr16:53453452\|53453765	hsa-miR-768-5p	0	0	1
chr16:53453452\|53453765	hsa-miR-526a	0	0	1
chr16:53453452\|53453765	hsa-miR-583	0	1	0
chr16:53453452\|53453765	hsa-miR-1253	0	1	0
chr16:53453452\|53453765	hsa-miR-3916	0	1	0
chr16:53453452\|53453765	hsa-miR-4471	0	1	0
chr16:53453452\|53453765	hsa-miR-4502	1	0	0
chr16:53453452\|53453765	hsa-miR-4507	1	0	0
chr16:53453452\|53453765	hsa-miR-4682	0	1	0
chr16:53453452\|53453765	hsa-miR-6124	0	1	0
chr16:53453452\|53453765	hsa-miR-8059	0	1	0
chr16:53453452\|53453765	hsa-miR-29b-2-5p	1	0	0
chr16:53453452\|53453765	hsa-miR-7851-3p	0	1	0
chr16:53453452\|53453765	hsa-miR-6746-5p	1	0	0
chr16:53453452\|53453765	hsa-miR-4728-3p	1	0	0
chr16:53453452\|53453765	hsa-miR-23a-5p	1	0	0
chr16:53453452\|53453765	hsa-miR-6760-5p	0	1	0
chr16:53453452\|53453765	hsa-miR-3667-3p	0	1	0
chr16:53453452\|53453765	hsa-miR-6780a-3p	0	1	0
chr16:53453452\|53453765	hsa-miR-1304-3p	0	1	0
chr16:53453452\|53453765	hsa-miR-653-3p	0	1	0
chr16:53453452\|53453765	hsa-miR-335-3p	0	1	0
chr16:53453452\|53453765	hsa-miR-4796-3p	1	0	0
chr16:53453452\|53453765	hsa-miR-7107-5p	1	0	0
chr16:53453452\|53453765	hsa-miR-10526-3p	0	1	0
chr16:53453452\|53453765	hsa-miR-3059-5p	0	1	0
chr16:53453452\|53453765	hsa-miR-301a-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:53453452\|53453765
ORF Type	ORF1
Protein Length	28
Nucleotide Length	87
Protein Sequence	MLLTNLFFIKFPNIGFPEMFLYPLCFQN
Nucleotide Sequence	TTGCTACTTACAAACCTTTTTTTCATAAAGTTTCCTAATATAGGGTTTCCAGAAATGTTCCTTTATCCCCTTTGCTTCCAAAACTAG

CircID	chr16:53453452\|53453765
ORF Type	ORF2
Protein Length	27
Nucleotide Length	84
Protein Sequence	MLNQVFLQKTFSRYFFATYKPFFHKVS
Nucleotide Sequence	ATGTTAAATCAAGTTTTTCTCCAGAAAACATTTTCACGTTATTTCTTTGCTACTTACAAACCTTTTTTTCATAAAGTTTCCTAA

CircID	chr16:53453452\|53453765
ORF Type	ORF3
Protein Length	28
Nucleotide Length	87
Protein Sequence	MKIFMLKILNLPLTPLVSLRNCVPYMMA
Nucleotide Sequence	CTGAAGATTTTCATGCTAAAGATTCTAAACCTTCCTCTGACCCCCCTTGTATCATTGAGAAACTGTGTTCCTTACATGATGGCCTAG

CircID	chr16:53453452\|53453765
ORF Type	ORF4
Protein Length	34
Nucleotide Length	105
Protein Sequence	MCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKVCK
Nucleotide Sequence	CTGTGTTCCTTACATGATGGCCTAGTTTTGGAAGCAAAGGGGATAAAGGAACATTTCTGGAAACCCTATATTAGGAAACTTTATGAAAAAAAGGTTTGTAAGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information