CircNet

General Information

circRNA Basic Information

CircID	chr16:53873786\|53879987
Strand	+
CircType	exon
Host Gene	ENSG00000140718.19;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATGATCTCAATGCCACCCACCAACACTGTGTTTTGGCCGGTTCACAACCTCGGTTTAGTTCCACCCACCGAGTGGCAGAGCTTGACCTTTCATGGAACTACAGGGGACAAGTGTGAGAAAATTGGGCGGAAGTGGTACAACAAAGTGAGAGGTACAGGTGCAAGGTCTTCCAGTGGCAGTACTGCTGCTCAACAGGAACCTTGGATTATATTTTACAACGCTGTCAGTTGGCTCTGCAGAATGTCTGTGACGATGTGGACAATGATGATGTCTCTTTGAAATCCTTTGAGCCTGCAGTTTTGAAACAAGGAGAAGAAATTCATAATGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:53873786\|53879987	hsa-miR-223-5p	0	0	1
chr16:53873786\|53879987	hsa-miR-223-3p	0	0	1
chr16:53873786\|53879987	hsa-miR-141-5p	0	0	1
chr16:53873786\|53879987	hsa-miR-141-3p	0	0	1
chr16:53873786\|53879987	hsa-miR-200a-5p	0	0	1
chr16:53873786\|53879987	hsa-miR-200a-3p	0	0	1
chr16:53873786\|53879987	hsa-miR-494-5p	0	0	1
chr16:53873786\|53879987	hsa-miR-494-3p	0	0	1
chr16:53873786\|53879987	hsa-miR-593-5p	0	0	1
chr16:53873786\|53879987	hsa-miR-593-3p	0	0	1
chr16:53873786\|53879987	hsa-miR-596	0	0	1
chr16:53873786\|53879987	hsa-miR-421	0	0	1
chr16:53873786\|53879987	hsa-miR-298	0	0	1
chr16:53873786\|53879987	hsa-miR-892a	0	0	1
chr16:53873786\|53879987	hsa-miR-873-5p	0	0	1
chr16:53873786\|53879987	hsa-miR-873-3p	0	0	1
chr16:53873786\|53879987	hsa-miR-760	1	1	1
chr16:53873786\|53879987	hsa-miR-1205	0	0	1
chr16:53873786\|53879987	hsa-miR-1253	0	0	1
chr16:53873786\|53879987	hsa-miR-1272	0	1	1
chr16:53873786\|53879987	hsa-miR-513b-5p	0	0	1
chr16:53873786\|53879987	hsa-miR-513b-3p	0	0	1
chr16:53873786\|53879987	hsa-miR-1184	0	0	1
chr16:53873786\|53879987	hsa-miR-501-5p	0	1	1
chr16:53873786\|53879987	hsa-miR-671-3p	0	1	1
chr16:53873786\|53879987	hsa-miR-654-3p	0	0	1
chr16:53873786\|53879987	hsa-miR-1280	0	0	1
chr16:53873786\|53879987	hsa-miR-500	0	0	1
chr16:53873786\|53879987	hsa-miR-203	0	0	1
chr16:53873786\|53879987	hsa-miR-564	1	0	0
chr16:53873786\|53879987	hsa-miR-759	0	1	0
chr16:53873786\|53879987	hsa-miR-765	1	0	0
chr16:53873786\|53879987	hsa-miR-3138	0	1	0
chr16:53873786\|53879987	hsa-miR-4428	0	1	0
chr16:53873786\|53879987	hsa-miR-4491	0	1	0
chr16:53873786\|53879987	hsa-miR-8057	1	1	0
chr16:53873786\|53879987	hsa-miR-124-5p	1	1	0
chr16:53873786\|53879987	hsa-miR-6741-5p	1	0	0
chr16:53873786\|53879987	hsa-miR-3928-3p	1	1	0
chr16:53873786\|53879987	hsa-miR-4793-3p	1	0	0
chr16:53873786\|53879987	hsa-miR-6749-5p	1	0	0
chr16:53873786\|53879987	hsa-miR-6717-5p	1	1	0
chr16:53873786\|53879987	hsa-miR-4715-5p	0	1	0
chr16:53873786\|53879987	hsa-miR-4695-3p	0	1	0
chr16:53873786\|53879987	hsa-miR-1226-3p	0	1	0
chr16:53873786\|53879987	hsa-miR-4763-3p	1	0	0
chr16:53873786\|53879987	hsa-miR-6735-5p	0	1	0
chr16:53873786\|53879987	hsa-miR-6849-5p	1	0	0
chr16:53873786\|53879987	hsa-miR-3150b-5p	0	1	0
chr16:53873786\|53879987	hsa-miR-10523-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:53873786\|53879987
ORF Type	ORF1
Protein Length	36
Nucleotide Length	111
Protein Sequence	MNFFSLFQNCRLKGFQRDIIIVHIVTDILQSQLTAL
Nucleotide Sequence	ATGAATTTCTTCTCCTTGTTTCAAAACTGCAGGCTCAAAGGATTTCAAAGAGACATCATCATTGTCCACATCGTCACAGACATTCTGCAGAGCCAACTGACAGCGTTGTAA

CircID	chr16:53873786\|53879987
ORF Type	ORF2
Protein Length	45
Nucleotide Length	138
Protein Sequence	MQAQRISKRHHHCPHRHRHSAEPTDSVVKYNPRFLLSTLPLGGWN
Nucleotide Sequence	CTGCAGGCTCAAAGGATTTCAAAGAGACATCATCATTGTCCACATCGTCACAGACATTCTGCAGAGCCAACTGACAGCGTTGTAAAATATAATCCAAGGTTCCTGTTGAGCACTCTGCCACTCGGTGGGTGGAACTAA

CircID	chr16:53873786\|53879987
ORF Type	ORF3
Protein Length	57
Nucleotide Length	174
Protein Sequence	MISMPPTNTVFWPVHNLGLVPPTEWQSAQQEPWIIFYNAVSWLCRMSVTMWTMMMSL
Nucleotide Sequence	ATGATCTCAATGCCACCCACCAACACTGTGTTTTGGCCGGTTCACAACCTCGGTTTAGTTCCACCCACCGAGTGGCAGAGTGCTCAACAGGAACCTTGGATTATATTTTACAACGCTGTCAGTTGGCTCTGCAGAATGTCTGTGACGATGTGGACAATGATGATGTCTCTTTGA

CircID	chr16:53873786\|53879987
ORF Type	ORF4
Protein Length	64
Nucleotide Length	192
Protein Sequence	MAGSQPRFSSTHRVAECSTGTLDYILQRCQLALQNVCDDVDNDDVSLKSFEPAVLKQGEEIHNE
Nucleotide Sequence	TTGGCCGGTTCACAACCTCGGTTTAGTTCCACCCACCGAGTGGCAGAGTGCTCAACAGGAACCTTGGATTATATTTTACAACGCTGTCAGTTGGCTCTGCAGAATGTCTGTGACGATGTGGACAATGATGATGTCTCTTTGAAATCCTTTGAGCCTGCAGTTTTGAAACAAGGAGAAGAAATTCATAATGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr16:53873786\|53879987	MOV10	1	0	0
chr16:53873786\|53879987	FUS	2	0	0
chr16:53873786\|53879987	TAF15	1	0	0
chr16:53873786\|53879987	CPSF1	0	1	0
chr16:53873786\|53879987	ELAVL1	1	2	1
chr16:53873786\|53879987	NOP58	0	0	1
chr16:53873786\|53879987	U2AF2	5	3	0
chr16:53873786\|53879987	DDX54	0	0	2
chr16:53873786\|53879987	TROVE2	0	0	1
chr16:53873786\|53879987	FIP1L1	1	1	0
chr16:53873786\|53879987	PTBP1	11	1	0
chr16:53873786\|53879987	HNRNPC	2	10	0
chr16:53873786\|53879987	HNRNPA1	0	1	0
chr16:53873786\|53879987	LIN28B	0	0	2
chr16:53873786\|53879987	IGF2BP2	1	1	2
chr16:53873786\|53879987	BUD13	2	0	0
chr16:53873786\|53879987	RBFOX2	0	1	0
chr16:53873786\|53879987	CSTF2T	0	0	1
chr16:53873786\|53879987	WDR33	0	1	0
chr16:53873786\|53879987	DKC1	0	1	0
chr16:53873786\|53879987	EIF4A3	2	2	3
chr16:53873786\|53879987	FBL	0	0	1

CircRNA Information