CircNet

General Information

circRNA Basic Information

CircID	chr16:55505798\|55505927
Strand	-
CircType	exon
Host Gene	ENSG00000087245.11;
Algorism	CIRI2;
Sequence	CCTTGGAGCCAATGGAGACTGTCTCAAGAGGGCACTGGTGGCCCGACAGCCTGGCACAGGGCAGTGGGACAGGGCATGGCCAGGTGGCCACTCCAGACCCCTGGCTTTTCACTGCTGGCTGCCTTAGAAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:55505798\|55505927	hsa-miR-122-5p	0	0	1
chr16:55505798\|55505927	hsa-miR-122-3p	0	0	1
chr16:55505798\|55505927	hsa-miR-136-5p	0	0	1
chr16:55505798\|55505927	hsa-miR-136-3p	0	0	1
chr16:55505798\|55505927	hsa-miR-526b-5p	0	0	1
chr16:55505798\|55505927	hsa-miR-526b-3p	0	0	1
chr16:55505798\|55505927	hsa-miR-506-5p	0	0	1
chr16:55505798\|55505927	hsa-miR-506-3p	0	0	1
chr16:55505798\|55505927	hsa-miR-588	0	0	1
chr16:55505798\|55505927	hsa-miR-874-5p	0	0	1
chr16:55505798\|55505927	hsa-miR-874-3p	0	0	1
chr16:55505798\|55505927	hsa-miR-1227-5p	0	0	1
chr16:55505798\|55505927	hsa-miR-1227-3p	0	0	1
chr16:55505798\|55505927	hsa-miR-1825	0	1	1
chr16:55505798\|55505927	hsa-miR-146b-3p	0	0	1
chr16:55505798\|55505927	hsa-miR-339-5p	0	1	1
chr16:55505798\|55505927	hsa-miR-124	0	0	1
chr16:55505798\|55505927	hsa-miR-516b	0	0	1
chr16:55505798\|55505927	hsa-miR-3181	0	1	0
chr16:55505798\|55505927	hsa-miR-3714	0	1	0
chr16:55505798\|55505927	hsa-miR-4498	1	0	0
chr16:55505798\|55505927	hsa-miR-5194	0	1	0
chr16:55505798\|55505927	hsa-miR-3677-5p	0	1	0
chr16:55505798\|55505927	hsa-miR-6765-3p	0	1	0
chr16:55505798\|55505927	hsa-miR-1266-3p	0	1	0
chr16:55505798\|55505927	hsa-miR-3190-5p	0	1	0
chr16:55505798\|55505927	hsa-miR-744-5p	1	0	0
chr16:55505798\|55505927	hsa-miR-6872-3p	0	1	0
chr16:55505798\|55505927	hsa-miR-1914-5p	0	1	0
chr16:55505798\|55505927	hsa-miR-4524a-3p	0	1	0
chr16:55505798\|55505927	hsa-miR-6748-3p	0	1	0
chr16:55505798\|55505927	hsa-miR-4433a-5p	0	1	0
chr16:55505798\|55505927	hsa-miR-4433b-5p	0	1	0
chr16:55505798\|55505927	hsa-miR-6890-3p	0	1	0
chr16:55505798\|55505927	hsa-miR-6722-3p	0	1	0
chr16:55505798\|55505927	hsa-miR-4436b-3p	0	1	0
chr16:55505798\|55505927	hsa-miR-324-3p	1	1	0
chr16:55505798\|55505927	hsa-miR-6805-3p	0	1	0
chr16:55505798\|55505927	hsa-miR-6775-3p	1	1	0
chr16:55505798\|55505927	hsa-miR-4701-5p	0	1	0
chr16:55505798\|55505927	hsa-miR-4676-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:55505798\|55505927
ORF Type	ORF1
Protein Length	37
Nucleotide Length	111
Protein Sequence	MSQEGTGGPTAWHRAVGQGMARWPLQTPGFSLLAALE
Nucleotide Sequence	CTGTCTCAAGAGGGCACTGGTGGCCCGACAGCCTGGCACAGGGCAGTGGGACAGGGCATGGCCAGGTGGCCACTCCAGACCCCTGGCTTTTCACTGCTGGCTGCCTTAGAA

CircID	chr16:55505798\|55505927
ORF Type	ORF2
Protein Length	30
Nucleotide Length	93
Protein Sequence	MVARQPGTGQWDRAWPGGHSRPLAFHCWLP
Nucleotide Sequence	CTGGTGGCCCGACAGCCTGGCACAGGGCAGTGGGACAGGGCATGGCCAGGTGGCCACTCCAGACCCCTGGCTTTTCACTGCTGGCTGCCTTAG

CircID	chr16:55505798\|55505927
ORF Type	ORF3
Protein Length	42
Nucleotide Length	126
Protein Sequence	LEPMETVSRGHWWPDSLAQGSGTGHGQVATPDPWLFTAGCLR
Nucleotide Sequence	TTGGAGCCAATGGAGACTGTCTCAAGAGGGCACTGGTGGCCCGACAGCCTGGCACAGGGCAGTGGGACAGGGCATGGCCAGGTGGCCACTCCAGACCCCTGGCTTTTCACTGCTGGCTGCCTTAGA

CircID	chr16:55505798\|55505927
ORF Type	ORF4
Protein Length	32
Nucleotide Length	96
Protein Sequence	MEWPPGHALSHCPVPGCRATSALLRQSPLAPR
Nucleotide Sequence	CTGGAGTGGCCACCTGGCCATGCCCTGTCCCACTGCCCTGTGCCAGGCTGTCGGGCCACCAGTGCCCTCTTGAGACAGTCTCCATTGGCTCCAAGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information