CircNet

General Information

circRNA Basic Information

CircID	chr16:56798476\|56821593
Strand	+
CircType	exon
Host Gene	ENSG00000102900.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	GGCTTCCTGAAGAATGAGAAGGACAATGCCCTGCTGTCTGCCATCGAAGAGTCCCGGAAGAGGGGTCATTGTTCTCTGTTCCTTTCTGGCAGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAATTCTGCACACACTGCTGGCATCAGGAGAAGACGCCCTTGACTTTACTCAAGAAAGCGAGGTAGCTTGAATGCAAAAGATAAACTACTGTTAATAAAAACATGAAGTCAAAGAACCAAGCTACATCAGTGATGTGGGACCCCCTGGTCGAAGCTCTCTGGATAACATCGAGATGGCCTATGCGCGGCAAATTTATATCTATAATGAGAAAATTGTAAATGGACACCTGCAGCCTAACCTGGTGGACCTTTGTGCTTCCGTCGCAGAGCTCGATGATAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:56798476\|56821593
ORF Type	ORF1
Protein Length	61
Nucleotide Length	183
Protein Sequence	MPAVCAEFAVSLAPTQPTLTPDGTPQPCRRSARKEQRTMTPLPGLFDGRQQGIVLLILQEA
Nucleotide Sequence	ATGCCAGCAGTGTGTGCAGAATTCGCTGTTTCACTTGCTCCCACTCAACCAACATTGACTCCCGATGGTACTCCTCAGCCATGCCGAAGGTCTGCCAGAAAGGAACAGAGAACAATGACCCCTCTTCCGGGACTCTTCGATGGCAGACAGCAGGGCATTGTCCTTCTCATTCTTCAGGAAGCC

CircID	chr16:56798476\|56821593
ORF Type	ORF2
Protein Length	43
Nucleotide Length	129
Protein Sequence	MAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEVA*
Nucleotide Sequence	ATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAATTCTGCACACACTGCTGGCATCAGGAGAAGACGCCCTTGACTTTACTCAAGAAAGCGAGGTAGCTTGA

CircID	chr16:56798476\|56821593
ORF Type	ORF3
Protein Length	39
Nucleotide Length	117
Protein Sequence	MKSKNQATSVMWDPLVEALWITSRWPMRGKFISIMRKL*
Nucleotide Sequence	ATGAAGTCAAAGAACCAAGCTACATCAGTGATGTGGGACCCCCTGGTCGAAGCTCTCTGGATAACATCGAGATGGCCTATGCGCGGCAAATTTATATCTATAATGAGAAAATTGTAA

CircID	chr16:56798476\|56821593
ORF Type	ORF4
Protein Length	36
Nucleotide Length	108
Protein Sequence	MAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDK
Nucleotide Sequence	ATGGCCTATGCGCGGCAAATTTATATCTATAATGAGAAAATTGTAAATGGACACCTGCAGCCTAACCTGGTGGACCTTTGTGCTTCCGTCGCAGAGCTCGATGATAAG

CircID	chr16:56798476\|56821593
ORF Type	ORF5
Protein Length	34
Nucleotide Length	102
Protein Sequence	MPKVCQKGTENNDPSSGTLRWQTAGHCPSHSSGS
Nucleotide Sequence	ATGCCGAAGGTCTGCCAGAAAGGAACAGAGAACAATGACCCCTCTTCCGGGACTCTTCGATGGCAGACAGCAGGGCATTGTCCTTCTCATTCTTCAGGAAGC

CircID	chr16:56798476\|56821593
ORF Type	ORF6
Protein Length	32
Nucleotide Length	96
Protein Sequence	MRRTMPCCLPSKSPGRGVIVLCSFLADLRHG*
Nucleotide Sequence	ATGAGAAGGACAATGCCCTGCTGTCTGCCATCGAAGAGTCCCGGAAGAGGGGTCATTGTTCTCTGTTCCTTTCTGGCAGACCTTCGGCATGGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr16:56798476\|56821593	UCHL5	0	0	1
chr16:56798476\|56821593	U2AF2	9	4	0
chr16:56798476\|56821593	MOV10	0	0	1
chr16:56798476\|56821593	ELAVL1	6	4	2
chr16:56798476\|56821593	SF3B4	2	0	0
chr16:56798476\|56821593	FAM120A	0	0	1
chr16:56798476\|56821593	SF3B1	1	0	0
chr16:56798476\|56821593	CELF2	2	0	0
chr16:56798476\|56821593	PRPF8	2	2	1
chr16:56798476\|56821593	YTHDF1	2	0	0
chr16:56798476\|56821593	UPF1	1	2	0
chr16:56798476\|56821593	TNRC6A	1	0	2
chr16:56798476\|56821593	FMR1	7	0	13
chr16:56798476\|56821593	CPSF6	2	0	2
chr16:56798476\|56821593	NUDT21	2	0	1
chr16:56798476\|56821593	CSTF2	1	0	0
chr16:56798476\|56821593	FUS	0	1	2
chr16:56798476\|56821593	GNL3	0	1	1
chr16:56798476\|56821593	DGCR8	0	1	0
chr16:56798476\|56821593	SRSF7	0	2	1
chr16:56798476\|56821593	SRSF1	2	0	9
chr16:56798476\|56821593	NOP58	1	0	4
chr16:56798476\|56821593	SUB1	1	0	0
chr16:56798476\|56821593	NOP56	1	0	0
chr16:56798476\|56821593	SRSF9	1	0	2
chr16:56798476\|56821593	DDX54	0	0	4
chr16:56798476\|56821593	RBM22	1	0	0
chr16:56798476\|56821593	PTBP1	1	0	0
chr16:56798476\|56821593	HNRNPC	5	0	4
chr16:56798476\|56821593	TRA2A	0	0	5
chr16:56798476\|56821593	ZNF184	0	0	1
chr16:56798476\|56821593	HNRNPA1	1	0	0
chr16:56798476\|56821593	DDX3X	6	0	0
chr16:56798476\|56821593	ACIN1	0	0	1
chr16:56798476\|56821593	LIN28B	0	0	5
chr16:56798476\|56821593	FXR1	0	0	5
chr16:56798476\|56821593	FXR2	1	0	7
chr16:56798476\|56821593	SND1	0	0	1
chr16:56798476\|56821593	IGF2BP1	1	0	2
chr16:56798476\|56821593	GTF2F1	0	1	0
chr16:56798476\|56821593	IGF2BP3	1	0	2
chr16:56798476\|56821593	IGF2BP2	2	1	5
chr16:56798476\|56821593	TARDBP	2	0	4
chr16:56798476\|56821593	YTHDC1	1	0	0
chr16:56798476\|56821593	BUD13	3	1	4
chr16:56798476\|56821593	RBFOX2	0	1	0
chr16:56798476\|56821593	DDX24	1	0	0
chr16:56798476\|56821593	RTCB	1	0	0
chr16:56798476\|56821593	CSTF2T	1	0	1
chr16:56798476\|56821593	BCCIP	0	0	1
chr16:56798476\|56821593	VIM	0	0	1
chr16:56798476\|56821593	RBM27	0	0	1
chr16:56798476\|56821593	CPSF7	2	0	0
chr16:56798476\|56821593	PPIG	1	0	0
chr16:56798476\|56821593	AGO2	0	0	1
chr16:56798476\|56821593	ATXN2	3	0	1
chr16:56798476\|56821593	EIF4A3	6	1	8
chr16:56798476\|56821593	FBL	0	0	2

CircRNA Information