CircRNA Information

General Information
circRNA Basic Information
CircID chr16:57664556|57664734
Strand -
CircType exon
Host Gene ENSG00000205336.10;
Algorism CIRI2;
Sequence TGAGACTGACCTCCTCTGGTGACACTGGCCTAGGGCCTGACACTCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTCTGTCCAACAAACACACACGGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:57664556|57664734 hsa-miR-99a-5p 0 0 1
chr16:57664556|57664734 hsa-miR-99a-3p 0 0 1
chr16:57664556|57664734 hsa-miR-100-5p 0 0 1
chr16:57664556|57664734 hsa-miR-100-3p 0 0 1
chr16:57664556|57664734 hsa-miR-185-5p 0 0 1
chr16:57664556|57664734 hsa-miR-185-3p 0 0 1
chr16:57664556|57664734 hsa-miR-99b-5p 0 0 1
chr16:57664556|57664734 hsa-miR-99b-3p 0 0 1
chr16:57664556|57664734 hsa-miR-432-5p 0 0 1
chr16:57664556|57664734 hsa-miR-432-3p 0 0 1
chr16:57664556|57664734 hsa-miR-589-5p 0 0 1
chr16:57664556|57664734 hsa-miR-589-3p 0 0 1
chr16:57664556|57664734 hsa-miR-597-5p 0 0 1
chr16:57664556|57664734 hsa-miR-597-3p 0 0 1
chr16:57664556|57664734 hsa-miR-620 0 0 1
chr16:57664556|57664734 hsa-miR-622 0 0 1
chr16:57664556|57664734 hsa-miR-1226-5p 0 0 1
chr16:57664556|57664734 hsa-miR-1226-3p 0 0 1
chr16:57664556|57664734 hsa-miR-1270 0 0 1
chr16:57664556|57664734 hsa-miR-1275 0 0 1
chr16:57664556|57664734 hsa-miR-199a-5p 0 0 1
chr16:57664556|57664734 hsa-miR-566 0 0 1
chr16:57664556|57664734 hsa-miR-199b-5p 0 0 1
chr16:57664556|57664734 hsa-miR-1254 0 0 1
chr16:57664556|57664734 hsa-miR-637 1 0 0
chr16:57664556|57664734 hsa-miR-762 1 0 0
chr16:57664556|57664734 hsa-miR-3147 1 0 0
chr16:57664556|57664734 hsa-miR-3196 1 0 0
chr16:57664556|57664734 hsa-miR-4479 1 0 0
chr16:57664556|57664734 hsa-miR-4488 1 0 0
chr16:57664556|57664734 hsa-miR-4656 1 0 0
chr16:57664556|57664734 hsa-miR-4748 1 0 0
chr16:57664556|57664734 hsa-miR-3150a-3p 1 0 0
chr16:57664556|57664734 hsa-miR-6857-5p 1 0 0
chr16:57664556|57664734 hsa-miR-4653-3p 1 0 0
chr16:57664556|57664734 hsa-miR-6741-5p 1 0 0
chr16:57664556|57664734 hsa-miR-6805-5p 1 0 0
chr16:57664556|57664734 hsa-miR-23a-5p 1 0 0
chr16:57664556|57664734 hsa-miR-6874-5p 1 0 0
chr16:57664556|57664734 hsa-miR-7109-5p 1 0 0
chr16:57664556|57664734 hsa-miR-6740-5p 1 0 0
chr16:57664556|57664734 hsa-miR-6824-5p 1 0 0
chr16:57664556|57664734 hsa-miR-10400-5p 1 0 0
chr16:57664556|57664734 hsa-miR-1233-5p 1 0 0
chr16:57664556|57664734 hsa-miR-4763-3p 1 0 0
chr16:57664556|57664734 hsa-miR-6752-5p 1 0 0
chr16:57664556|57664734 hsa-miR-6803-5p 1 0 0
chr16:57664556|57664734 hsa-miR-7110-5p 1 0 0
chr16:57664556|57664734 hsa-miR-1249-5p 1 0 0
chr16:57664556|57664734 hsa-miR-6751-5p 1 0 0
chr16:57664556|57664734 hsa-miR-1237-5p 1 0 0
chr16:57664556|57664734 hsa-miR-4649-5p 1 0 0
chr16:57664556|57664734 hsa-miR-6729-5p 1 0 0
chr16:57664556|57664734 hsa-miR-6846-5p 1 0 0
chr16:57664556|57664734 hsa-miR-6848-5p 1 0 0
chr16:57664556|57664734 hsa-miR-10394-3p 1 0 0
chr16:57664556|57664734 hsa-miR-6791-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:57664556|57664734
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MCPYHLQQASNLPVCVCWTELTMMGGRGRLELFGGLERTS
Nucleotide Sequence CTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCGTGTGTGTTTGTTGGACAGAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAG

CircID chr16:57664556|57664734
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MLDRINHDGRPRAPGAIWGLGENLLGECQALGQCHQRRSVS
Nucleotide Sequence TTGTTGGACAGAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGAGTGTCAGGCCCTAGGCCAGTGTCACCAGAGGAGGTCAGTCTCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites