CircRNA Information

General Information
circRNA Basic Information
CircID chr16:58044345|58044643
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCCGCAGTTGTTCTAGAGCGGAAGGAACCTGGTGCTGCCTTGGGCTGGCTCTCTGACCTTGGGCACCTTGCCAGCATCCCATCAATACCAGGCAGGGCCAGGTTTCAATCAAGGGGTGAGCACAAGAGATCAGAGCGGCTGCAGAGTGCCAAGCTCACATACAGAAGCTGTGTAACTGGCCTGAGCACTGGCAAAGCAGGCAAGGTCCCCCCTGAGTCACCCAGGCTGGAGTATAGTGGCGCGATCACAGCTCACTGCAGCCTTGACCTCCCAGACTCAAGTAATCCTCCGACCGCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:58044345|58044643 hsa-miR-18a-5p 0 0 1
chr16:58044345|58044643 hsa-miR-18a-3p 0 0 1
chr16:58044345|58044643 hsa-miR-29a-5p 0 0 1
chr16:58044345|58044643 hsa-miR-29a-3p 0 0 1
chr16:58044345|58044643 hsa-miR-31-5p 0 0 1
chr16:58044345|58044643 hsa-miR-31-3p 0 0 1
chr16:58044345|58044643 hsa-miR-96-5p 0 0 1
chr16:58044345|58044643 hsa-miR-96-3p 0 0 1
chr16:58044345|58044643 hsa-miR-29c-5p 0 0 1
chr16:58044345|58044643 hsa-miR-29c-3p 0 0 1
chr16:58044345|58044643 hsa-miR-328-5p 0 0 1
chr16:58044345|58044643 hsa-miR-328-3p 0 0 1
chr16:58044345|58044643 hsa-miR-18b-5p 0 0 1
chr16:58044345|58044643 hsa-miR-18b-3p 0 0 1
chr16:58044345|58044643 hsa-miR-510-5p 0 0 1
chr16:58044345|58044643 hsa-miR-510-3p 0 0 1
chr16:58044345|58044643 hsa-miR-558 0 0 1
chr16:58044345|58044643 hsa-miR-567 0 0 1
chr16:58044345|58044643 hsa-miR-572 0 0 1
chr16:58044345|58044643 hsa-miR-581 0 0 1
chr16:58044345|58044643 hsa-miR-627-5p 0 0 1
chr16:58044345|58044643 hsa-miR-627-3p 0 0 1
chr16:58044345|58044643 hsa-miR-661 1 1 1
chr16:58044345|58044643 hsa-miR-1271-5p 0 0 1
chr16:58044345|58044643 hsa-miR-1271-3p 0 0 1
chr16:58044345|58044643 hsa-miR-766-5p 0 0 1
chr16:58044345|58044643 hsa-miR-766-3p 0 0 1
chr16:58044345|58044643 hsa-miR-924 0 0 1
chr16:58044345|58044643 hsa-miR-935 0 1 1
chr16:58044345|58044643 hsa-miR-297 0 1 1
chr16:58044345|58044643 hsa-miR-1178-5p 0 0 1
chr16:58044345|58044643 hsa-miR-1178-3p 0 0 1
chr16:58044345|58044643 hsa-miR-1202 0 0 1
chr16:58044345|58044643 hsa-miR-1205 0 0 1
chr16:58044345|58044643 hsa-miR-1291 0 1 1
chr16:58044345|58044643 hsa-miR-1262 0 0 1
chr16:58044345|58044643 hsa-miR-1266-5p 0 0 1
chr16:58044345|58044643 hsa-miR-1266-3p 0 0 1
chr16:58044345|58044643 hsa-miR-1825 0 0 1
chr16:58044345|58044643 hsa-miR-1184 0 1 1
chr16:58044345|58044643 hsa-miR-490-3p 0 0 1
chr16:58044345|58044643 hsa-miR-508-5p 0 1 1
chr16:58044345|58044643 hsa-miR-218 0 0 1
chr16:58044345|58044643 hsa-miR-1254 0 0 1
chr16:58044345|58044643 hsa-miR-29b 0 0 1
chr16:58044345|58044643 hsa-miR-578 1 0 0
chr16:58044345|58044643 hsa-miR-2113 1 0 0
chr16:58044345|58044643 hsa-miR-3137 1 0 0
chr16:58044345|58044643 hsa-miR-3182 0 1 0
chr16:58044345|58044643 hsa-miR-4259 1 0 0
chr16:58044345|58044643 hsa-miR-3714 0 1 0
chr16:58044345|58044643 hsa-miR-3907 0 1 0
chr16:58044345|58044643 hsa-miR-4453 0 1 0
chr16:58044345|58044643 hsa-miR-3689c 0 1 0
chr16:58044345|58044643 hsa-miR-4522 1 0 0
chr16:58044345|58044643 hsa-miR-4538 0 1 0
chr16:58044345|58044643 hsa-miR-4675 1 0 0
chr16:58044345|58044643 hsa-miR-4734 1 0 0
chr16:58044345|58044643 hsa-miR-4741 1 0 0
chr16:58044345|58044643 hsa-miR-4767 1 0 0
chr16:58044345|58044643 hsa-miR-5684 0 1 0
chr16:58044345|58044643 hsa-miR-5685 0 1 0
chr16:58044345|58044643 hsa-miR-5698 1 0 0
chr16:58044345|58044643 hsa-miR-6075 0 1 0
chr16:58044345|58044643 hsa-miR-7703 1 0 0
chr16:58044345|58044643 hsa-miR-7974 1 0 0
chr16:58044345|58044643 hsa-miR-4665-3p 1 0 0
chr16:58044345|58044643 hsa-miR-6825-5p 1 0 0
chr16:58044345|58044643 hsa-miR-6894-5p 1 1 0
chr16:58044345|58044643 hsa-miR-1972 1 1 0
chr16:58044345|58044643 hsa-miR-6720-5p 0 1 0
chr16:58044345|58044643 hsa-miR-6799-5p 1 1 0
chr16:58044345|58044643 hsa-miR-6089 1 0 0
chr16:58044345|58044643 hsa-miR-3192-5p 1 1 0
chr16:58044345|58044643 hsa-miR-7847-3p 1 0 0
chr16:58044345|58044643 hsa-miR-6741-5p 1 0 0
chr16:58044345|58044643 hsa-miR-6727-5p 1 0 0
chr16:58044345|58044643 hsa-miR-6776-5p 0 1 0
chr16:58044345|58044643 hsa-miR-6849-3p 0 1 0
chr16:58044345|58044643 hsa-miR-1915-5p 1 1 0
chr16:58044345|58044643 hsa-miR-6732-5p 1 0 0
chr16:58044345|58044643 hsa-miR-6798-5p 0 1 0
chr16:58044345|58044643 hsa-miR-3194-5p 0 1 0
chr16:58044345|58044643 hsa-miR-6728-3p 1 0 0
chr16:58044345|58044643 hsa-miR-30b-3p 0 1 0
chr16:58044345|58044643 hsa-miR-6858-3p 0 1 0
chr16:58044345|58044643 hsa-miR-3934-3p 1 1 0
chr16:58044345|58044643 hsa-miR-7109-5p 1 0 0
chr16:58044345|58044643 hsa-miR-1908-3p 1 0 0
chr16:58044345|58044643 hsa-miR-4640-5p 1 0 0
chr16:58044345|58044643 hsa-miR-6749-5p 1 0 0
chr16:58044345|58044643 hsa-miR-659-5p 0 1 0
chr16:58044345|58044643 hsa-miR-149-3p 1 0 0
chr16:58044345|58044643 hsa-miR-937-5p 1 0 0
chr16:58044345|58044643 hsa-miR-7156-3p 0 1 0
chr16:58044345|58044643 hsa-miR-7843-3p 0 1 0
chr16:58044345|58044643 hsa-miR-199a-5p 0 1 0
chr16:58044345|58044643 hsa-miR-3065-3p 0 1 0
chr16:58044345|58044643 hsa-miR-6869-5p 1 0 0
chr16:58044345|58044643 hsa-miR-3191-3p 1 0 0
chr16:58044345|58044643 hsa-miR-6743-3p 1 1 0
chr16:58044345|58044643 hsa-miR-1304-5p 0 1 0
chr16:58044345|58044643 hsa-miR-6801-5p 0 1 0
chr16:58044345|58044643 hsa-miR-6814-5p 0 1 0
chr16:58044345|58044643 hsa-miR-1199-3p 1 0 0
chr16:58044345|58044643 hsa-miR-6802-3p 0 1 0
chr16:58044345|58044643 hsa-miR-624-5p 0 1 0
chr16:58044345|58044643 hsa-miR-449c-3p 1 0 0
chr16:58044345|58044643 hsa-miR-3173-5p 0 1 0
chr16:58044345|58044643 hsa-miR-7158-5p 1 0 0
chr16:58044345|58044643 hsa-miR-4714-5p 1 0 0
chr16:58044345|58044643 hsa-miR-1233-5p 1 0 0
chr16:58044345|58044643 hsa-miR-1273h-5p 1 1 0
chr16:58044345|58044643 hsa-miR-3689b-3p 0 1 0
chr16:58044345|58044643 hsa-miR-4763-3p 1 0 0
chr16:58044345|58044643 hsa-miR-6778-5p 1 0 0
chr16:58044345|58044643 hsa-miR-6775-5p 1 0 0
chr16:58044345|58044643 hsa-miR-7107-5p 1 0 0
chr16:58044345|58044643 hsa-miR-11181-3p 1 0 0
chr16:58044345|58044643 hsa-miR-6780a-5p 0 1 0
chr16:58044345|58044643 hsa-miR-3620-5p 1 0 0
chr16:58044345|58044643 hsa-miR-4728-5p 1 0 0
chr16:58044345|58044643 hsa-miR-6795-5p 1 0 0
chr16:58044345|58044643 hsa-miR-6885-5p 1 0 0
chr16:58044345|58044643 hsa-miR-939-5p 1 0 0
chr16:58044345|58044643 hsa-miR-3085-5p 1 0 0
chr16:58044345|58044643 hsa-miR-6799-3p 0 1 0
chr16:58044345|58044643 hsa-miR-5008-3p 1 0 0
chr16:58044345|58044643 hsa-miR-7843-5p 0 1 0
chr16:58044345|58044643 hsa-miR-3116 1 0 0
chr16:58044345|58044643 hsa-miR-6862-3p 1 0 0
chr16:58044345|58044643 hsa-miR-6848-3p 1 0 0
chr16:58044345|58044643 hsa-miR-6824-3p 1 0 0
chr16:58044345|58044643 hsa-miR-4735-3p 0 1 0
chr16:58044345|58044643 hsa-miR-6502-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr16:58044345|58044643
ORF Type ORF1
Protein Length 86
Nucleotide Length 258
Protein Sequence MGWLSDLGHLASIPSIPGRARFQSRGEHKRSERLQSAKLTYRSCVTGLSTGKAGKVPPESPRLEYSGAITAHCSLDLPDSSNPPTA
Nucleotide Sequence TTGGGCTGGCTCTCTGACCTTGGGCACCTTGCCAGCATCCCATCAATACCAGGCAGGGCCAGGTTTCAATCAAGGGGTGAGCACAAGAGATCAGAGCGGCTGCAGAGTGCCAAGCTCACATACAGAAGCTGTGTAACTGGCCTGAGCACTGGCAAAGCAGGCAAGGTCCCCCCTGAGTCACCCAGGCTGGAGTATAGTGGCGCGATCACAGCTCACTGCAGCCTTGACCTCCCAGACTCAAGTAATCCTCCGACCGCA

CircID chr16:58044345|58044643
ORF Type ORF2
Protein Length 48
Nucleotide Length 147
Protein Sequence MVLPWAGSLTLGTLPASHQYQAGPGFNQGVSTRDQSGCRVPSSHTEAV
Nucleotide Sequence CTGGTGCTGCCTTGGGCTGGCTCTCTGACCTTGGGCACCTTGCCAGCATCCCATCAATACCAGGCAGGGCCAGGTTTCAATCAAGGGGTGAGCACAAGAGATCAGAGCGGCTGCAGAGTGCCAAGCTCACATACAGAAGCTGTGTAA

CircID chr16:58044345|58044643
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MAKQARSPLSHPGWSIVARSQLTAALTSQTQVILRPQ
Nucleotide Sequence CTGGCAAAGCAGGCAAGGTCCCCCCTGAGTCACCCAGGCTGGAGTATAGTGGCGCGATCACAGCTCACTGCAGCCTTGACCTCCCAGACTCAAGTAATCCTCCGACCGCAG

CircID chr16:58044345|58044643
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MGDSGGTLPALPVLRPVTQLLYVSLALCSRSDLLCSPLD
Nucleotide Sequence CTGGGTGACTCAGGGGGGACCTTGCCTGCTTTGCCAGTGCTCAGGCCAGTTACACAGCTTCTGTATGTGAGCTTGGCACTCTGCAGCCGCTCTGATCTCTTGTGCTCACCCCTTGATTGA

CircID chr16:58044345|58044643
ORF Type ORF5
Protein Length 33
Nucleotide Length 99
Protein Sequence MALPGIDGMLARCPRSESQPKAAPGSFRSRTTA
Nucleotide Sequence CTGGCCCTGCCTGGTATTGATGGGATGCTGGCAAGGTGCCCAAGGTCAGAGAGCCAGCCCAAGGCAGCACCAGGTTCCTTCCGCTCTAGAACAACTGCG

CircID chr16:58044345|58044643
ORF Type ORF6
Protein Length 44
Nucleotide Length 132
Protein Sequence MISCAHPLIETWPCLVLMGCWQGAQGQRASPRQHQVPSALEQLR
Nucleotide Sequence CTGATCTCTTGTGCTCACCCCTTGATTGAAACCTGGCCCTGCCTGGTATTGATGGGATGCTGGCAAGGTGCCCAAGGTCAGAGAGCCAGCCCAAGGCAGCACCAGGTTCCTTCCGCTCTAGAACAACTGCGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites