CircNet

General Information

circRNA Basic Information

CircID	chr16:66816581\|66823600
Strand	-
CircType	exon
Host Gene	ENSG00000159593.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	AACCGAGCTGAAGCTGCCATGGAATTCTTACAAGAATTAAATAGCGATGTCTCTGGAAGTTTTGTGGAAGAGTAATAGAATCTCATCCAGATAATGCATTAGAGGATCTACGACTAGATAAGCCATTTCCTGAACTGAGAGAACATTTTCAGTCCTATGATTTGGATCATATGGAAAAAAAGGACCACAGTCATACTCCATGGATTGTGATCATAGCTAAATATTTAGCACAGTGGTATAGTGAAACAAATGGACGAATACCTAAAACGTATAAAGAAAAAGAGGACTTCAGAGATTTGATTAGACAAGGAATTCTAAAAAATGAAAATGGGGCTCCAGAAGATGAAGAGAATTTTGAAGAAGCTATTAAAAATGTGAACACAGCACTAAATACAACTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:66816581\|66823600	hsa-miR-22-3p	0	1	1
chr16:66816581\|66823600	hsa-miR-28-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:66816581\|66823600
ORF Type	ORF1
Protein Length	77
Nucleotide Length	231
Protein Sequence	MEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILKNENGAPEDEENFEEAIKNVNTALNTTQ
Nucleotide Sequence	ATGGAAAAAAAGGACCACAGTCATACTCCATGGATTGTGATCATAGCTAAATATTTAGCACAGTGGTATAGTGAAACAAATGGACGAATACCTAAAACGTATAAAGAAAAAGAGGACTTCAGAGATTTGATTAGACAAGGAATTCTAAAAAATGAAAATGGGGCTCCAGAAGATGAAGAGAATTTTGAAGAAGCTATTAAAAATGTGAACACAGCACTAAATACAACTCAG

CircID	chr16:66816581\|66823600
ORF Type	ORF2
Protein Length	55
Nucleotide Length	165
Protein Sequence	MEYDCGPFFPYDPNHRTENVLSVQEMAYLVVDPLMHYLDEILLLFHKTSRDIAI*
Nucleotide Sequence	ATGGAGTATGACTGTGGTCCTTTTTTTCCATATGATCCAAATCATAGGACTGAAAATGTTCTCTCAGTTCAGGAAATGGCTTATCTAGTCGTAGATCCTCTAATGCATTATCTGGATGAGATTCTATTACTCTTCCACAAAACTTCCAGAGACATCGCTATTTAA

CircID	chr16:66816581\|66823600
ORF Type	ORF3
Protein Length	64
Nucleotide Length	192
Protein Sequence	VFTFLIASSKFSSSSGAPFSFFRIPCLIKSLKSSFSLYVLGIRPFVSLYHCAKYLAMITIHGV*
Nucleotide Sequence	GTGTTCACATTTTTAATAGCTTCTTCAAAATTCTCTTCATCTTCTGGAGCCCCATTTTCATTTTTTAGAATTCCTTGTCTAATCAAATCTCTGAAGTCCTCTTTTTCTTTATACGTTTTAGGTATTCGTCCATTTGTTTCACTATACCACTGTGCTAAATATTTAGCTATGATCACAATCCATGGAGTATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr16:66816581\|66823600	KHSRP	2	0	0
chr16:66816581\|66823600	TAF15	1	1	2
chr16:66816581\|66823600	DHX9	1	1	0
chr16:66816581\|66823600	SF3B4	1	0	0
chr16:66816581\|66823600	FAM120A	1	2	3
chr16:66816581\|66823600	KHDRBS1	0	0	1
chr16:66816581\|66823600	UPF1	1	0	0
chr16:66816581\|66823600	TNRC6A	0	0	1
chr16:66816581\|66823600	FMR1	0	2	3
chr16:66816581\|66823600	CPSF6	0	2	3
chr16:66816581\|66823600	TIA1	1	0	0
chr16:66816581\|66823600	ELAVL1	4	1	2
chr16:66816581\|66823600	GNL3	0	1	1
chr16:66816581\|66823600	DGCR8	0	1	0
chr16:66816581\|66823600	SRSF7	0	0	1
chr16:66816581\|66823600	SRSF1	0	1	7
chr16:66816581\|66823600	NOP58	2	0	6
chr16:66816581\|66823600	U2AF1	1	0	1
chr16:66816581\|66823600	U2AF2	18	3	10
chr16:66816581\|66823600	SRSF9	0	0	1
chr16:66816581\|66823600	NOP56	0	2	0
chr16:66816581\|66823600	DDX54	1	2	9
chr16:66816581\|66823600	SF3A3	2	0	0
chr16:66816581\|66823600	PTBP1	0	2	2
chr16:66816581\|66823600	HNRNPC	2	0	0
chr16:66816581\|66823600	TRA2A	0	3	5
chr16:66816581\|66823600	ZNF184	0	1	3
chr16:66816581\|66823600	HNRNPA1	5	0	0
chr16:66816581\|66823600	DDX3X	1	0	0
chr16:66816581\|66823600	ZC3H7B	0	0	1
chr16:66816581\|66823600	SMNDC1	1	0	0
chr16:66816581\|66823600	MSI2	2	0	5
chr16:66816581\|66823600	ACIN1	0	0	9
chr16:66816581\|66823600	LIN28A	0	0	1
chr16:66816581\|66823600	FXR1	0	2	4
chr16:66816581\|66823600	FXR2	0	0	2
chr16:66816581\|66823600	SND1	0	2	2
chr16:66816581\|66823600	IGF2BP1	2	1	6
chr16:66816581\|66823600	GTF2F1	0	1	0
chr16:66816581\|66823600	IGF2BP3	0	1	2
chr16:66816581\|66823600	IGF2BP2	4	3	17
chr16:66816581\|66823600	NPM1	0	1	0
chr16:66816581\|66823600	TARDBP	1	2	1
chr16:66816581\|66823600	BUD13	0	1	1
chr16:66816581\|66823600	RBFOX2	2	0	0
chr16:66816581\|66823600	SLTM	0	0	2
chr16:66816581\|66823600	EIF4G2	1	0	1
chr16:66816581\|66823600	DDX42	0	0	1
chr16:66816581\|66823600	CSTF2T	0	1	1
chr16:66816581\|66823600	SAFB2	0	1	3
chr16:66816581\|66823600	FBL	0	1	4
chr16:66816581\|66823600	EIF4A3	2	3	10
chr16:66816581\|66823600	AGO2	0	0	6

CircRNA Information