CircRNA Information

General Information
circRNA Basic Information
CircID chr16:66933999|66934273
Strand -
CircType exon
Host Gene ENSG00000166595.10;
Algorism CIRI2;
Sequence CTGCTCTACTACGTTCAACTCCTCTAGCGTCAGTGGATGCTCCGGGTCATTGATGGAGCGAATCAGATGTGGGAAGTGAAGGAAAAGGGACTCTGCGCCCTTGCCCACTTAGAACCCTCTGCCAGGAACGCCCTGCTGGGATGCGGCTCCACCAGCTGCTCGATATCACTGCTCCCCCCACCGCAAGCCCCCGGAACCCGCCCGCGCCCAGCAGCGGCGGATATCGAAGATCTCGCGTGCGTCGATGCTGTCGGGAACCTGCTCGTCCTCCTCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:66933999|66934273 hsa-miR-204-5p 0 0 1
chr16:66933999|66934273 hsa-miR-204-3p 0 0 1
chr16:66933999|66934273 hsa-miR-205-5p 0 0 1
chr16:66933999|66934273 hsa-miR-205-3p 0 0 1
chr16:66933999|66934273 hsa-miR-211-5p 0 0 1
chr16:66933999|66934273 hsa-miR-211-3p 0 0 1
chr16:66933999|66934273 hsa-miR-214-5p 0 0 1
chr16:66933999|66934273 hsa-miR-214-3p 0 0 1
chr16:66933999|66934273 hsa-miR-646 0 0 1
chr16:66933999|66934273 hsa-miR-411-5p 0 0 1
chr16:66933999|66934273 hsa-miR-411-3p 0 0 1
chr16:66933999|66934273 hsa-miR-657 0 1 1
chr16:66933999|66934273 hsa-miR-877-5p 0 0 1
chr16:66933999|66934273 hsa-miR-877-3p 0 0 1
chr16:66933999|66934273 hsa-miR-887-5p 0 0 1
chr16:66933999|66934273 hsa-miR-887-3p 0 0 1
chr16:66933999|66934273 hsa-miR-939-5p 0 0 1
chr16:66933999|66934273 hsa-miR-939-3p 0 0 1
chr16:66933999|66934273 hsa-miR-1203 0 0 1
chr16:66933999|66934273 hsa-miR-324-5p 1 1 1
chr16:66933999|66934273 hsa-miR-1207-3p 0 0 1
chr16:66933999|66934273 hsa-miR-188-3p 0 1 1
chr16:66933999|66934273 hsa-miR-151-5p 0 0 1
chr16:66933999|66934273 hsa-miR-1260 0 0 1
chr16:66933999|66934273 hsa-miR-138 0 0 1
chr16:66933999|66934273 hsa-miR-219-1-3p 0 0 1
chr16:66933999|66934273 hsa-miR-449a 1 1 0
chr16:66933999|66934273 hsa-miR-612 0 1 0
chr16:66933999|66934273 hsa-miR-637 1 1 0
chr16:66933999|66934273 hsa-miR-639 0 1 0
chr16:66933999|66934273 hsa-miR-663a 1 0 0
chr16:66933999|66934273 hsa-miR-658 1 0 0
chr16:66933999|66934273 hsa-miR-762 1 0 0
chr16:66933999|66934273 hsa-miR-761 1 1 0
chr16:66933999|66934273 hsa-miR-760 1 0 0
chr16:66933999|66934273 hsa-miR-920 1 0 0
chr16:66933999|66934273 hsa-miR-1268a 1 0 0
chr16:66933999|66934273 hsa-miR-1275 1 0 0
chr16:66933999|66934273 hsa-miR-1469 1 0 0
chr16:66933999|66934273 hsa-miR-2278 1 0 0
chr16:66933999|66934273 hsa-miR-3141 1 0 0
chr16:66933999|66934273 hsa-miR-3147 1 0 0
chr16:66933999|66934273 hsa-miR-3175 1 0 0
chr16:66933999|66934273 hsa-miR-3178 0 1 0
chr16:66933999|66934273 hsa-miR-3196 1 0 0
chr16:66933999|66934273 hsa-miR-4322 1 0 0
chr16:66933999|66934273 hsa-miR-4327 1 0 0
chr16:66933999|66934273 hsa-miR-4281 1 0 0
chr16:66933999|66934273 hsa-miR-3621 1 0 0
chr16:66933999|66934273 hsa-miR-1268b 1 0 0
chr16:66933999|66934273 hsa-miR-4440 1 0 0
chr16:66933999|66934273 hsa-miR-4449 1 0 0
chr16:66933999|66934273 hsa-miR-4466 1 0 0
chr16:66933999|66934273 hsa-miR-3689e 0 1 0
chr16:66933999|66934273 hsa-miR-3689f 1 1 0
chr16:66933999|66934273 hsa-miR-4486 0 1 0
chr16:66933999|66934273 hsa-miR-4488 1 0 0
chr16:66933999|66934273 hsa-miR-4498 1 0 0
chr16:66933999|66934273 hsa-miR-4505 1 0 0
chr16:66933999|66934273 hsa-miR-4519 1 0 0
chr16:66933999|66934273 hsa-miR-4525 1 0 0
chr16:66933999|66934273 hsa-miR-4526 1 0 0
chr16:66933999|66934273 hsa-miR-4530 0 1 0
chr16:66933999|66934273 hsa-miR-4634 1 0 0
chr16:66933999|66934273 hsa-miR-4651 1 0 0
chr16:66933999|66934273 hsa-miR-4654 1 0 0
chr16:66933999|66934273 hsa-miR-4675 1 0 0
chr16:66933999|66934273 hsa-miR-4688 1 0 0
chr16:66933999|66934273 hsa-miR-4706 1 0 0
chr16:66933999|66934273 hsa-miR-4710 1 0 0
chr16:66933999|66934273 hsa-miR-4734 1 0 0
chr16:66933999|66934273 hsa-miR-4739 1 0 0
chr16:66933999|66934273 hsa-miR-4767 1 1 0
chr16:66933999|66934273 hsa-miR-5090 1 0 0
chr16:66933999|66934273 hsa-miR-5190 1 0 0
chr16:66933999|66934273 hsa-miR-5572 1 0 0
chr16:66933999|66934273 hsa-miR-5698 1 1 0
chr16:66933999|66934273 hsa-miR-5787 1 0 0
chr16:66933999|66934273 hsa-miR-6081 1 1 0
chr16:66933999|66934273 hsa-miR-6090 1 0 0
chr16:66933999|66934273 hsa-miR-6860 1 0 0
chr16:66933999|66934273 hsa-miR-8072 1 0 0
chr16:66933999|66934273 hsa-miR-8073 1 1 0
chr16:66933999|66934273 hsa-miR-8089 1 0 0
chr16:66933999|66934273 hsa-miR-9899 1 0 0
chr16:66933999|66934273 hsa-miR-12127 0 1 0
chr16:66933999|66934273 hsa-miR-143-5p 1 0 0
chr16:66933999|66934273 hsa-miR-92a-2-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6734-5p 1 0 0
chr16:66933999|66934273 hsa-miR-125b-1-3p 1 0 0
chr16:66933999|66934273 hsa-miR-7106-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6825-5p 1 0 0
chr16:66933999|66934273 hsa-miR-27a-5p 1 0 0
chr16:66933999|66934273 hsa-miR-3692-5p 0 1 0
chr16:66933999|66934273 hsa-miR-6880-5p 1 0 0
chr16:66933999|66934273 hsa-miR-7847-3p 1 0 0
chr16:66933999|66934273 hsa-miR-4695-5p 1 0 0
chr16:66933999|66934273 hsa-miR-7154-3p 0 1 0
chr16:66933999|66934273 hsa-miR-6741-5p 1 1 0
chr16:66933999|66934273 hsa-miR-6727-5p 1 0 0
chr16:66933999|66934273 hsa-miR-181a-2-3p 0 1 0
chr16:66933999|66934273 hsa-miR-23b-5p 1 1 0
chr16:66933999|66934273 hsa-miR-5589-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6776-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6832-3p 0 1 0
chr16:66933999|66934273 hsa-miR-6742-5p 1 0 0
chr16:66933999|66934273 hsa-miR-1292-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6772-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6793-5p 1 1 0
chr16:66933999|66934273 hsa-miR-23a-5p 1 1 0
chr16:66933999|66934273 hsa-miR-6798-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6786-5p 1 1 0
chr16:66933999|66934273 hsa-miR-6835-5p 1 0 0
chr16:66933999|66934273 hsa-miR-7109-5p 1 1 0
chr16:66933999|66934273 hsa-miR-193b-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6784-5p 1 0 0
chr16:66933999|66934273 hsa-miR-7161-3p 0 1 0
chr16:66933999|66934273 hsa-miR-1228-5p 1 0 0
chr16:66933999|66934273 hsa-miR-4787-5p 1 0 0
chr16:66933999|66934273 hsa-miR-5010-5p 1 0 0
chr16:66933999|66934273 hsa-miR-7112-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6869-5p 1 0 0
chr16:66933999|66934273 hsa-miR-423-5p 1 0 0
chr16:66933999|66934273 hsa-miR-3191-3p 1 0 0
chr16:66933999|66934273 hsa-miR-1225-5p 1 0 0
chr16:66933999|66934273 hsa-miR-654-5p 1 0 0
chr16:66933999|66934273 hsa-miR-2114-5p 0 1 0
chr16:66933999|66934273 hsa-miR-4746-3p 1 0 0
chr16:66933999|66934273 hsa-miR-4750-5p 1 0 0
chr16:66933999|66934273 hsa-miR-598-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6837-3p 0 1 0
chr16:66933999|66934273 hsa-miR-34a-5p 1 0 0
chr16:66933999|66934273 hsa-miR-196b-3p 0 1 0
chr16:66933999|66934273 hsa-miR-1207-5p 1 0 0
chr16:66933999|66934273 hsa-miR-1233-5p 1 0 0
chr16:66933999|66934273 hsa-miR-4763-3p 1 0 0
chr16:66933999|66934273 hsa-miR-6769b-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6778-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6787-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6812-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6816-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6870-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6775-5p 1 0 0
chr16:66933999|66934273 hsa-miR-1343-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6726-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6737-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6743-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6752-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6756-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6769a-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6803-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6819-5p 1 0 0
chr16:66933999|66934273 hsa-miR-7110-5p 1 0 0
chr16:66933999|66934273 hsa-miR-11181-3p 1 0 0
chr16:66933999|66934273 hsa-miR-1249-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6722-3p 1 0 0
chr16:66933999|66934273 hsa-miR-6751-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6779-5p 1 0 0
chr16:66933999|66934273 hsa-miR-7111-5p 1 0 0
chr16:66933999|66934273 hsa-miR-3620-5p 1 0 0
chr16:66933999|66934273 hsa-miR-4728-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6836-5p 1 1 0
chr16:66933999|66934273 hsa-miR-6862-5p 1 0 0
chr16:66933999|66934273 hsa-miR-10396b-5p 1 0 0
chr16:66933999|66934273 hsa-miR-1237-5p 1 0 0
chr16:66933999|66934273 hsa-miR-328-5p 1 0 0
chr16:66933999|66934273 hsa-miR-449c-5p 1 0 0
chr16:66933999|66934273 hsa-miR-4649-5p 1 1 0
chr16:66933999|66934273 hsa-miR-6729-5p 1 1 0
chr16:66933999|66934273 hsa-miR-6795-5p 1 1 0
chr16:66933999|66934273 hsa-miR-6846-5p 1 1 0
chr16:66933999|66934273 hsa-miR-6848-5p 1 1 0
chr16:66933999|66934273 hsa-miR-6858-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6887-5p 1 1 0
chr16:66933999|66934273 hsa-miR-4697-5p 1 0 0
chr16:66933999|66934273 hsa-miR-4723-5p 1 1 0
chr16:66933999|66934273 hsa-miR-6885-5p 1 0 0
chr16:66933999|66934273 hsa-miR-10394-3p 1 1 0
chr16:66933999|66934273 hsa-miR-6731-5p 1 0 0
chr16:66933999|66934273 hsa-miR-4665-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6855-5p 1 0 0
chr16:66933999|66934273 hsa-miR-4472 1 1 0
chr16:66933999|66934273 hsa-miR-6766-5p 1 0 0
chr16:66933999|66934273 hsa-miR-6724-5p 1 0 0
chr16:66933999|66934273 hsa-miR-449b-5p 1 1 0
chr16:66933999|66934273 hsa-miR-3619-5p 1 0 0
chr16:66933999|66934273 hsa-miR-3689a-5p 0 1 0
chr16:66933999|66934273 hsa-miR-3689b-5p 0 1 0
chr16:66933999|66934273 hsa-miR-7157-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:66933999|66934273
ORF Type ORF1
Protein Length 79
Nucleotide Length 237
Protein Sequence MLRVIDGANQMWEVKEKGLCALAHLEPSARNALLGCGSTSCSISLLPPPQAPGTRPRPAAADIEDLACVDAVGNLLVLL
Nucleotide Sequence ATGCTCCGGGTCATTGATGGAGCGAATCAGATGTGGGAAGTGAAGGAAAAGGGACTCTGCGCCCTTGCCCACTTAGAACCCTCTGCCAGGAACGCCCTGCTGGGATGCGGCTCCACCAGCTGCTCGATATCACTGCTCCCCCCACCGCAAGCCCCCGGAACCCGCCCGCGCCCAGCAGCGGCGGATATCGAAGATCTCGCGTGCGTCGATGCTGTCGGGAACCTGCTCGTCCTCCTC
CircID chr16:66933999|66934273
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MPGTPCWDAAPPAARYHCSPHRKPPEPARAQQRRISKISRASMLSGTCSSSS
Nucleotide Sequence CTGCCAGGAACGCCCTGCTGGGATGCGGCTCCACCAGCTGCTCGATATCACTGCTCCCCCCACCGCAAGCCCCCGGAACCCGCCCGCGCCCAGCAGCGGCGGATATCGAAGATCTCGCGTGCGTCGATGCTGTCGGGAACCTGCTCGTCCTCCTCG
CircID chr16:66933999|66934273
ORF Type ORF3
Protein Length 61
Nucleotide Length 183
Protein Sequence MRPCPLRTLCQERPAGMRLHQLLDITAPPTASPRNPPAPSSGGYRRSRVRRCCREPARPPR
Nucleotide Sequence CTGCGCCCTTGCCCACTTAGAACCCTCTGCCAGGAACGCCCTGCTGGGATGCGGCTCCACCAGCTGCTCGATATCACTGCTCCCCCCACCGCAAGCCCCCGGAACCCGCCCGCGCCCAGCAGCGGCGGATATCGAAGATCTCGCGTGCGTCGATGCTGTCGGGAACCTGCTCGTCCTCCTCGC
CircID chr16:66933999|66934273
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MVEPHPSRAFLAEGSKWARAQSPFSFTSHI
Nucleotide Sequence CTGGTGGAGCCGCATCCCAGCAGGGCGTTCCTGGCAGAGGGTTCTAAGTGGGCAAGGGCGCAGAGTCCCTTTTCCTTCACTTCCCACATCTGA
CircID chr16:66933999|66934273
ORF Type ORF5
Protein Length 55
Nucleotide Length 168
Protein Sequence MLGAGGFRGLAVGGAVISSSWWSRIPAGRSWQRVLSGQGRRVPFPSLPTSDSLHQ
Nucleotide Sequence CTGCTGGGCGCGGGCGGGTTCCGGGGGCTTGCGGTGGGGGGAGCAGTGATATCGAGCAGCTGGTGGAGCCGCATCCCAGCAGGGCGTTCCTGGCAGAGGGTTCTAAGTGGGCAAGGGCGCAGAGTCCCTTTTCCTTCACTTCCCACATCTGATTCGCTCCATCAATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab