CircRNA Information

General Information
circRNA Basic Information
CircID chr16:671951|672181
Strand +
CircType exon
Host Gene ENSG00000140983.12;
Algorism CIRI2;
Sequence CTGTGATGGCATGGGCCTGGTCCTGCTCACAGAGGGTGGGGTAGCCCAGGTAGCCTAGGTGTCCAAGGCAGCTCCGGACGTCCAGGTAGGTCACCAGGCTGGGGGTGGGCGGGAGGCAGGCACAGTGTTATGGTGGGGAGGGTGGTGCGGCAGGCGGGCATGGTGTGGGCCGCACTTACGTCCACTGGCAGAGGTATCCGTGCAGGGGCAACCGGCCGGCCTCTGTGCGGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:671951|672181 hsa-miR-22-5p 0 0 1
chr16:671951|672181 hsa-miR-22-3p 0 0 1
chr16:671951|672181 hsa-miR-192-5p 0 0 1
chr16:671951|672181 hsa-miR-192-3p 0 0 1
chr16:671951|672181 hsa-miR-215-5p 0 0 1
chr16:671951|672181 hsa-miR-215-3p 0 0 1
chr16:671951|672181 hsa-miR-141-5p 0 0 1
chr16:671951|672181 hsa-miR-141-3p 0 0 1
chr16:671951|672181 hsa-miR-200a-5p 0 0 1
chr16:671951|672181 hsa-miR-200a-3p 0 0 1
chr16:671951|672181 hsa-miR-302a-5p 0 0 1
chr16:671951|672181 hsa-miR-302a-3p 0 0 1
chr16:671951|672181 hsa-miR-302b-5p 0 0 1
chr16:671951|672181 hsa-miR-302b-3p 0 0 1
chr16:671951|672181 hsa-miR-302c-5p 0 0 1
chr16:671951|672181 hsa-miR-302c-3p 0 0 1
chr16:671951|672181 hsa-miR-302d-5p 0 0 1
chr16:671951|672181 hsa-miR-302d-3p 0 0 1
chr16:671951|672181 hsa-miR-372-5p 0 0 1
chr16:671951|672181 hsa-miR-372-3p 0 0 1
chr16:671951|672181 hsa-miR-373-5p 0 0 1
chr16:671951|672181 hsa-miR-373-3p 0 0 1
chr16:671951|672181 hsa-miR-520e-5p 0 0 1
chr16:671951|672181 hsa-miR-520e-3p 0 0 1
chr16:671951|672181 hsa-miR-520b-5p 0 0 1
chr16:671951|672181 hsa-miR-520b-3p 0 0 1
chr16:671951|672181 hsa-miR-558 0 0 1
chr16:671951|672181 hsa-miR-619-5p 0 0 1
chr16:671951|672181 hsa-miR-619-3p 0 0 1
chr16:671951|672181 hsa-miR-645 0 0 1
chr16:671951|672181 hsa-miR-1203 0 0 1
chr16:671951|672181 hsa-miR-1286 0 1 1
chr16:671951|672181 hsa-miR-302e 0 0 1
chr16:671951|672181 hsa-miR-361-3p 0 0 1
chr16:671951|672181 hsa-miR-875-5p 0 0 1
chr16:671951|672181 hsa-miR-520d-3p 0 0 1
chr16:671951|672181 hsa-miR-519b-3p 0 0 1
chr16:671951|672181 hsa-miR-519c-3p 0 0 1
chr16:671951|672181 hsa-miR-520a-3p 0 0 1
chr16:671951|672181 hsa-miR-520c-3p 0 0 1
chr16:671951|672181 hsa-miR-220b 0 0 1
chr16:671951|672181 hsa-miR-550 0 0 1
chr16:671951|672181 hsa-miR-519a 0 0 1
chr16:671951|672181 hsa-miR-346 1 1 0
chr16:671951|672181 hsa-miR-596 1 0 0
chr16:671951|672181 hsa-miR-636 1 1 0
chr16:671951|672181 hsa-miR-663b 1 1 0
chr16:671951|672181 hsa-miR-1197 0 1 0
chr16:671951|672181 hsa-miR-1470 1 0 0
chr16:671951|672181 hsa-miR-1913 1 0 0
chr16:671951|672181 hsa-miR-1976 1 0 0
chr16:671951|672181 hsa-miR-1260b 1 0 0
chr16:671951|672181 hsa-miR-4290 1 0 0
chr16:671951|672181 hsa-miR-4641 0 1 0
chr16:671951|672181 hsa-miR-5193 1 0 0
chr16:671951|672181 hsa-miR-197-3p 1 1 0
chr16:671951|672181 hsa-miR-6749-3p 1 0 0
chr16:671951|672181 hsa-miR-214-5p 1 0 0
chr16:671951|672181 hsa-miR-6747-3p 1 1 0
chr16:671951|672181 hsa-miR-4665-3p 1 0 0
chr16:671951|672181 hsa-miR-6836-3p 1 1 0
chr16:671951|672181 hsa-miR-149-5p 1 0 0
chr16:671951|672181 hsa-miR-6892-3p 1 0 0
chr16:671951|672181 hsa-miR-7851-3p 0 1 0
chr16:671951|672181 hsa-miR-6762-3p 1 0 0
chr16:671951|672181 hsa-miR-191-3p 1 0 0
chr16:671951|672181 hsa-miR-3189-5p 1 0 0
chr16:671951|672181 hsa-miR-6849-3p 1 1 0
chr16:671951|672181 hsa-miR-1915-5p 1 0 0
chr16:671951|672181 hsa-miR-6845-3p 1 0 0
chr16:671951|672181 hsa-miR-6765-3p 0 1 0
chr16:671951|672181 hsa-miR-6882-3p 1 1 0
chr16:671951|672181 hsa-miR-6884-3p 1 0 0
chr16:671951|672181 hsa-miR-939-3p 0 1 0
chr16:671951|672181 hsa-miR-6772-3p 1 0 0
chr16:671951|672181 hsa-miR-4763-5p 1 1 0
chr16:671951|672181 hsa-miR-6763-3p 1 0 0
chr16:671951|672181 hsa-miR-7108-3p 1 1 0
chr16:671951|672181 hsa-miR-1247-5p 1 0 0
chr16:671951|672181 hsa-miR-4707-3p 1 1 0
chr16:671951|672181 hsa-miR-6894-3p 1 1 0
chr16:671951|672181 hsa-miR-6803-3p 1 0 0
chr16:671951|672181 hsa-miR-6514-3p 1 0 0
chr16:671951|672181 hsa-miR-5001-3p 1 0 0
chr16:671951|672181 hsa-miR-6757-3p 1 0 0
chr16:671951|672181 hsa-miR-7113-3p 1 0 0
chr16:671951|672181 hsa-miR-3667-3p 1 0 0
chr16:671951|672181 hsa-miR-3614-5p 1 0 0
chr16:671951|672181 hsa-miR-767-5p 0 1 0
chr16:671951|672181 hsa-miR-5196-3p 1 0 0
chr16:671951|672181 hsa-miR-4667-3p 1 0 0
chr16:671951|672181 hsa-miR-6742-3p 0 1 0
chr16:671951|672181 hsa-miR-1306-5p 1 0 0
chr16:671951|672181 hsa-miR-339-5p 1 0 0
chr16:671951|672181 hsa-miR-1237-3p 1 0 0
chr16:671951|672181 hsa-miR-6889-3p 1 1 0
chr16:671951|672181 hsa-miR-4687-5p 1 0 0
chr16:671951|672181 hsa-miR-3619-3p 1 0 0
chr16:671951|672181 hsa-miR-4758-3p 1 0 0
chr16:671951|672181 hsa-miR-6867-3p 1 0 0
chr16:671951|672181 hsa-miR-7112-3p 1 0 0
chr16:671951|672181 hsa-miR-6778-3p 0 1 0
chr16:671951|672181 hsa-miR-1224-3p 1 0 0
chr16:671951|672181 hsa-miR-2276-5p 0 1 0
chr16:671951|672181 hsa-miR-6752-3p 1 0 0
chr16:671951|672181 hsa-miR-6872-3p 1 1 0
chr16:671951|672181 hsa-miR-7848-3p 1 1 0
chr16:671951|672181 hsa-miR-6865-3p 1 1 0
chr16:671951|672181 hsa-miR-1914-5p 1 0 0
chr16:671951|672181 hsa-miR-6738-3p 1 0 0
chr16:671951|672181 hsa-miR-6777-3p 1 0 0
chr16:671951|672181 hsa-miR-6760-3p 1 0 0
chr16:671951|672181 hsa-miR-654-3p 1 0 0
chr16:671951|672181 hsa-miR-3620-3p 1 0 0
chr16:671951|672181 hsa-miR-4433a-5p 1 0 0
chr16:671951|672181 hsa-miR-1229-3p 1 0 0
chr16:671951|672181 hsa-miR-6734-3p 1 0 0
chr16:671951|672181 hsa-miR-6729-3p 1 0 0
chr16:671951|672181 hsa-miR-642a-5p 1 0 0
chr16:671951|672181 hsa-miR-6800-3p 1 0 0
chr16:671951|672181 hsa-miR-6732-3p 1 0 0
chr16:671951|672181 hsa-miR-3162-3p 1 0 0
chr16:671951|672181 hsa-miR-4485-5p 0 1 0
chr16:671951|672181 hsa-miR-5002-3p 1 0 0
chr16:671951|672181 hsa-miR-885-5p 1 0 0
chr16:671951|672181 hsa-miR-4685-3p 1 0 0
chr16:671951|672181 hsa-miR-1271-3p 1 1 0
chr16:671951|672181 hsa-miR-4722-3p 1 0 0
chr16:671951|672181 hsa-miR-6727-3p 1 0 0
chr16:671951|672181 hsa-miR-6893-3p 1 0 0
chr16:671951|672181 hsa-miR-6511a-3p 1 1 0
chr16:671951|672181 hsa-miR-6756-3p 1 0 0
chr16:671951|672181 hsa-miR-6784-3p 1 0 0
chr16:671951|672181 hsa-miR-6792-3p 1 0 0
chr16:671951|672181 hsa-miR-10392-3p 1 0 0
chr16:671951|672181 hsa-miR-483-3p 1 0 0
chr16:671951|672181 hsa-miR-6511b-3p 1 0 0
chr16:671951|672181 hsa-miR-6529-3p 0 1 0
chr16:671951|672181 hsa-miR-3085-3p 1 0 0
chr16:671951|672181 hsa-miR-6797-3p 1 0 0
chr16:671951|672181 hsa-miR-4769-3p 1 0 0
chr16:671951|672181 hsa-miR-6737-3p 1 0 0
chr16:671951|672181 hsa-miR-6835-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:671951|672181
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MVGRVVRQAGMVWAALTSTGRGIRAGATGRPLCG
Nucleotide Sequence ATGGTGGGGAGGGTGGTGCGGCAGGCGGGCATGGTGTGGGCCGCACTTACGTCCACTGGCAGAGGTATCCGTGCAGGGGCAACCGGCCGGCCTCTGTGCGGA
CircID chr16:671951|672181
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MGVGGRQAQCYGGEGGAAGGHGVGRTYVHWQRYPCRGNRPASVR
Nucleotide Sequence CTGGGGGTGGGCGGGAGGCAGGCACAGTGTTATGGTGGGGAGGGTGGTGCGGCAGGCGGGCATGGTGTGGGCCGCACTTACGTCCACTGGCAGAGGTATCCGTGCAGGGGCAACCGGCCGGCCTCTGTGCGG
CircID chr16:671951|672181
ORF Type ORF3
Protein Length 54
Nucleotide Length 165
Protein Sequence MPVDVSAAHTMPACRTTLPTITLCLPPAHPQPGDLPGRPELPWTPRLPGLPHPL
Nucleotide Sequence CTGCCAGTGGACGTAAGTGCGGCCCACACCATGCCCGCCTGCCGCACCACCCTCCCCACCATAACACTGTGCCTGCCTCCCGCCCACCCCCAGCCTGGTGACCTACCTGGACGTCCGGAGCTGCCTTGGACACCTAGGCTACCTGGGCTACCCCACCCTCTGTGA
CircID chr16:671951|672181
ORF Type ORF4
Protein Length 32
Nucleotide Length 96
Protein Sequence MVTYLDVRSCLGHLGYLGYPTLCEQDQAHAIT
Nucleotide Sequence CTGGTGACCTACCTGGACGTCCGGAGCTGCCTTGGACACCTAGGCTACCTGGGCTACCCCACCCTCTGTGAGCAGGACCAGGCCCATGCCATCACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab