CircRNA Information

General Information
circRNA Basic Information
CircID chr16:67202209|67202533
Strand +
CircType exon
Host Gene ENSG00000102890.13;
Algorism CIRI2;
Sequence CTTGTCGAAGTCCTCCTGTGTAGCCCGCATCTCCTTCCAGGTCTTATTCAACAGCTGGATGCCCACACAGAAGAGCTCGTGGAAGCTCTGGTCTTGGCCGAAGAACATGGGTGAGAAGTCCTGGGCTGTCTCAGAGCCTGGAGTGGGGGGGCAGGAGGGGCTCAGGGAGAAAGTGCATACAGCCCCTGGCCCTCTCTGCCCTTCCGTCCCCTGCTCTTGGCCATGCTGTGCCCAGTCCAGGCCACTCACAGGGCTCCCCAACACGGAGCAGCTCACACAGCAGCACCGTCAGCTGGATGCTGCCCCGGGCAAAGGGGCACTCGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:67202209|67202533 hsa-miR-107 0 0 1
chr16:67202209|67202533 hsa-miR-184 0 0 1
chr16:67202209|67202533 hsa-miR-335-5p 0 0 1
chr16:67202209|67202533 hsa-miR-335-3p 0 0 1
chr16:67202209|67202533 hsa-miR-422a 0 0 1
chr16:67202209|67202533 hsa-miR-484 0 0 1
chr16:67202209|67202533 hsa-miR-558 0 0 1
chr16:67202209|67202533 hsa-miR-612 0 0 1
chr16:67202209|67202533 hsa-miR-619-5p 0 0 1
chr16:67202209|67202533 hsa-miR-619-3p 0 0 1
chr16:67202209|67202533 hsa-miR-631 0 0 1
chr16:67202209|67202533 hsa-miR-653-5p 0 0 1
chr16:67202209|67202533 hsa-miR-653-3p 0 0 1
chr16:67202209|67202533 hsa-miR-760 0 0 1
chr16:67202209|67202533 hsa-miR-939-5p 0 0 1
chr16:67202209|67202533 hsa-miR-939-3p 0 0 1
chr16:67202209|67202533 hsa-miR-1229-5p 0 0 1
chr16:67202209|67202533 hsa-miR-1229-3p 0 0 1
chr16:67202209|67202533 hsa-miR-1250-5p 0 0 1
chr16:67202209|67202533 hsa-miR-1250-3p 0 0 1
chr16:67202209|67202533 hsa-miR-1267 0 0 1
chr16:67202209|67202533 hsa-miR-1288-5p 0 0 1
chr16:67202209|67202533 hsa-miR-1288-3p 0 0 1
chr16:67202209|67202533 hsa-miR-1225-3p 0 0 1
chr16:67202209|67202533 hsa-miR-486-3p 0 0 1
chr16:67202209|67202533 hsa-miR-146b-3p 0 0 1
chr16:67202209|67202533 hsa-miR-508-5p 0 0 1
chr16:67202209|67202533 hsa-miR-324-3p 0 0 1
chr16:67202209|67202533 hsa-miR-125a-5p 0 0 1
chr16:67202209|67202533 hsa-miR-502-3p 0 0 1
chr16:67202209|67202533 hsa-miR-501-3p 0 0 1
chr16:67202209|67202533 hsa-miR-1233 0 0 1
chr16:67202209|67202533 hsa-miR-125b 0 0 1
chr16:67202209|67202533 hsa-miR-103 0 0 1
chr16:67202209|67202533 hsa-miR-378 0 0 1
chr16:67202209|67202533 hsa-miR-644 0 0 1
chr16:67202209|67202533 hsa-miR-1269 0 0 1
chr16:67202209|67202533 hsa-miR-1285 0 0 1
chr16:67202209|67202533 hsa-miR-1254 0 0 1
chr16:67202209|67202533 hsa-miR-147 0 0 1
chr16:67202209|67202533 hsa-miR-762 1 0 0
chr16:67202209|67202533 hsa-miR-1231 1 0 0
chr16:67202209|67202533 hsa-miR-1538 1 0 0
chr16:67202209|67202533 hsa-miR-4322 1 0 0
chr16:67202209|67202533 hsa-miR-4265 1 0 0
chr16:67202209|67202533 hsa-miR-3911 1 0 0
chr16:67202209|67202533 hsa-miR-3945 1 0 0
chr16:67202209|67202533 hsa-miR-4466 1 0 0
chr16:67202209|67202533 hsa-miR-4507 1 0 0
chr16:67202209|67202533 hsa-miR-4533 1 0 0
chr16:67202209|67202533 hsa-miR-1587 1 0 0
chr16:67202209|67202533 hsa-miR-4734 1 0 0
chr16:67202209|67202533 hsa-miR-4739 1 0 0
chr16:67202209|67202533 hsa-miR-6069 1 0 0
chr16:67202209|67202533 hsa-miR-6088 1 0 0
chr16:67202209|67202533 hsa-miR-7974 1 0 0
chr16:67202209|67202533 hsa-miR-8089 1 0 0
chr16:67202209|67202533 hsa-miR-128-1-5p 1 0 0
chr16:67202209|67202533 hsa-miR-1247-3p 1 0 0
chr16:67202209|67202533 hsa-miR-671-5p 1 0 0
chr16:67202209|67202533 hsa-miR-4687-3p 1 0 0
chr16:67202209|67202533 hsa-miR-6799-5p 1 0 0
chr16:67202209|67202533 hsa-miR-8071 1 0 0
chr16:67202209|67202533 hsa-miR-4786-5p 1 0 0
chr16:67202209|67202533 hsa-miR-6727-5p 1 0 0
chr16:67202209|67202533 hsa-miR-6796-5p 1 0 0
chr16:67202209|67202533 hsa-miR-185-3p 1 0 0
chr16:67202209|67202533 hsa-miR-2467-5p 1 0 0
chr16:67202209|67202533 hsa-miR-6827-5p 1 0 0
chr16:67202209|67202533 hsa-miR-3156-5p 1 0 0
chr16:67202209|67202533 hsa-miR-6810-5p 1 0 0
chr16:67202209|67202533 hsa-miR-1226-5p 1 0 0
chr16:67202209|67202533 hsa-miR-3944-3p 1 0 0
chr16:67202209|67202533 hsa-miR-4640-5p 1 0 0
chr16:67202209|67202533 hsa-miR-149-3p 1 0 0
chr16:67202209|67202533 hsa-miR-3922-5p 1 0 0
chr16:67202209|67202533 hsa-miR-1225-5p 1 0 0
chr16:67202209|67202533 hsa-miR-1233-5p 1 0 0
chr16:67202209|67202533 hsa-miR-4763-3p 1 0 0
chr16:67202209|67202533 hsa-miR-5001-5p 1 0 0
chr16:67202209|67202533 hsa-miR-6803-5p 1 0 0
chr16:67202209|67202533 hsa-miR-7107-5p 1 0 0
chr16:67202209|67202533 hsa-miR-10401-5p 1 0 0
chr16:67202209|67202533 hsa-miR-1249-5p 1 0 0
chr16:67202209|67202533 hsa-miR-6722-3p 1 0 0
chr16:67202209|67202533 hsa-miR-6797-5p 1 0 0
chr16:67202209|67202533 hsa-miR-3620-5p 1 0 0
chr16:67202209|67202533 hsa-miR-5189-5p 1 0 0
chr16:67202209|67202533 hsa-miR-4649-5p 1 0 0
chr16:67202209|67202533 hsa-miR-3187-5p 1 0 0
chr16:67202209|67202533 hsa-miR-4723-5p 1 0 0
chr16:67202209|67202533 hsa-miR-4758-5p 1 0 0
chr16:67202209|67202533 hsa-miR-541-3p 1 0 0
chr16:67202209|67202533 hsa-miR-9851-5p 1 0 0
chr16:67202209|67202533 hsa-miR-6862-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:67202209|67202533
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MCSPHLLPGLIQQLDAHTEELVEALVLAEEHG
Nucleotide Sequence CTGTGTAGCCCGCATCTCCTTCCAGGTCTTATTCAACAGCTGGATGCCCACACAGAAGAGCTCGTGGAAGCTCTGGTCTTGGCCGAAGAACATGGGTGA
CircID chr16:67202209|67202533
ORF Type ORF2
Protein Length 68
Nucleotide Length 204
Protein Sequence MGCLRAWSGGAGGAQGESAYSPWPSLPFRPLLLAMLCPVQATHRAPQHGAAHTAAPSAGCCPGQRGTR
Nucleotide Sequence CTGGGCTGTCTCAGAGCCTGGAGTGGGGGGGCAGGAGGGGCTCAGGGAGAAAGTGCATACAGCCCCTGGCCCTCTCTGCCCTTCCGTCCCCTGCTCTTGGCCATGCTGTGCCCAGTCCAGGCCACTCACAGGGCTCCCCAACACGGAGCAGCTCACACAGCAGCACCGTCAGCTGGATGCTGCCCCGGGCAAAGGGGCACTCGT
CircID chr16:67202209|67202533
ORF Type ORF3
Protein Length 108
Nucleotide Length 324
Protein Sequence LSKSSCVARISFQVLFNSWMPTQKSSWKLWSWPKNMGEKSWAVSEPGVGGQEGLREKVHTAPGPLCPSVPCSWPCCAQSRPLTGLPNTEQLTQQHRQLDAAPGKGALV
Nucleotide Sequence TTGTCGAAGTCCTCCTGTGTAGCCCGCATCTCCTTCCAGGTCTTATTCAACAGCTGGATGCCCACACAGAAGAGCTCGTGGAAGCTCTGGTCTTGGCCGAAGAACATGGGTGAGAAGTCCTGGGCTGTCTCAGAGCCTGGAGTGGGGGGGCAGGAGGGGCTCAGGGAGAAAGTGCATACAGCCCCTGGCCCTCTCTGCCCTTCCGTCCCCTGCTCTTGGCCATGCTGTGCCCAGTCCAGGCCACTCACAGGGCTCCCCAACACGGAGCAGCTCACACAGCAGCACCGTCAGCTGGATGCTGCCCCGGGCAAAGGGGCACTCGTG
CircID chr16:67202209|67202533
ORF Type ORF4
Protein Length 66
Nucleotide Length 198
Protein Sequence MSQSLEWGGRRGSGRKCIQPLALSALPSPALGHAVPSPGHSQGSPTRSSSHSSTVSWMLPRAKGHS
Nucleotide Sequence CTGTCTCAGAGCCTGGAGTGGGGGGGCAGGAGGGGCTCAGGGAGAAAGTGCATACAGCCCCTGGCCCTCTCTGCCCTTCCGTCCCCTGCTCTTGGCCATGCTGTGCCCAGTCCAGGCCACTCACAGGGCTCCCCAACACGGAGCAGCTCACACAGCAGCACCGTCAGCTGGATGCTGCCCCGGGCAAAGGGGCACTCG
CircID chr16:67202209|67202533
ORF Type ORF5
Protein Length 53
Nucleotide Length 162
Protein Sequence MTVLLCELLRVGEPCEWPGLGTAWPRAGDGRAERARGCMHFLPEPLLPPHSRL
Nucleotide Sequence CTGACGGTGCTGCTGTGTGAGCTGCTCCGTGTTGGGGAGCCCTGTGAGTGGCCTGGACTGGGCACAGCATGGCCAAGAGCAGGGGACGGAAGGGCAGAGAGGGCCAGGGGCTGTATGCACTTTCTCCCTGAGCCCCTCCTGCCCCCCCACTCCAGGCTCTGA
CircID chr16:67202209|67202533
ORF Type ORF6
Protein Length 87
Nucleotide Length 261
Protein Sequence MGSPVSGLDWAQHGQEQGTEGQRGPGAVCTFSLSPSCPPTPGSETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEMRATQEDFDK
Nucleotide Sequence TTGGGGAGCCCTGTGAGTGGCCTGGACTGGGCACAGCATGGCCAAGAGCAGGGGACGGAAGGGCAGAGAGGGCCAGGGGCTGTATGCACTTTCTCCCTGAGCCCCTCCTGCCCCCCCACTCCAGGCTCTGAGACAGCCCAGGACTTCTCACCCATGTTCTTCGGCCAAGACCAGAGCTTCCACGAGCTCTTCTGTGTGGGCATCCAGCTGTTGAATAAGACCTGGAAGGAGATGCGGGCTACACAGGAGGACTTCGACAAG
CircID chr16:67202209|67202533
ORF Type ORF7
Protein Length 28
Nucleotide Length 87
Protein Sequence MRQPRTSHPCSSAKTRASTSSSVWASSC
Nucleotide Sequence CTGAGACAGCCCAGGACTTCTCACCCATGTTCTTCGGCCAAGACCAGAGCTTCCACGAGCTCTTCTGTGTGGGCATCCAGCTGTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab