CircRNA Information

General Information
circRNA Basic Information
CircID chr16:67229631|67229857
Strand +
CircType exon
Host Gene ENSG00000135723.12;
Algorism CIRI2;
Sequence CAAGAGCAGTCCTCGTGCCTTAGCTGCTAGGGAACGCAAGCGTTCCCGCGGCAACCGCAAGTCTTGTAAGTAACCCCCCACAATCCCACTGCCCACCTGAACCCCATCAACCCCCTCCAACCCTGCTCTGTCCCTGCAGTGAGAAGGACGTTGAAGAGTGGGCTCGGAGATGACCTGGTGCAGGCACTGGGACTAAGCAAGGGTCCTGGCCTGGAGGTGTGAAGGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:67229631|67229857 hsa-miR-15a-5p 0 0 1
chr16:67229631|67229857 hsa-miR-15a-3p 0 0 1
chr16:67229631|67229857 hsa-miR-95-5p 0 0 1
chr16:67229631|67229857 hsa-miR-95-3p 0 0 1
chr16:67229631|67229857 hsa-miR-34a-5p 0 0 1
chr16:67229631|67229857 hsa-miR-34a-3p 0 0 1
chr16:67229631|67229857 hsa-miR-15b-5p 0 0 1
chr16:67229631|67229857 hsa-miR-15b-3p 0 0 1
chr16:67229631|67229857 hsa-miR-195-5p 0 0 1
chr16:67229631|67229857 hsa-miR-195-3p 0 0 1
chr16:67229631|67229857 hsa-miR-377-5p 0 0 1
chr16:67229631|67229857 hsa-miR-377-3p 0 0 1
chr16:67229631|67229857 hsa-miR-424-5p 0 0 1
chr16:67229631|67229857 hsa-miR-424-3p 0 0 1
chr16:67229631|67229857 hsa-miR-449a 0 0 1
chr16:67229631|67229857 hsa-miR-497-5p 0 0 1
chr16:67229631|67229857 hsa-miR-497-3p 0 0 1
chr16:67229631|67229857 hsa-miR-519e-5p 0 0 1
chr16:67229631|67229857 hsa-miR-519e-3p 0 0 1
chr16:67229631|67229857 hsa-miR-503-5p 0 0 1
chr16:67229631|67229857 hsa-miR-503-3p 0 0 1
chr16:67229631|67229857 hsa-miR-506-5p 0 0 1
chr16:67229631|67229857 hsa-miR-506-3p 0 0 1
chr16:67229631|67229857 hsa-miR-611 0 0 1
chr16:67229631|67229857 hsa-miR-646 0 0 1
chr16:67229631|67229857 hsa-miR-449b-5p 0 0 1
chr16:67229631|67229857 hsa-miR-449b-3p 0 0 1
chr16:67229631|67229857 hsa-miR-541-5p 0 0 1
chr16:67229631|67229857 hsa-miR-541-3p 0 0 1
chr16:67229631|67229857 hsa-miR-1228-5p 0 0 1
chr16:67229631|67229857 hsa-miR-1228-3p 0 0 1
chr16:67229631|67229857 hsa-miR-1229-5p 0 0 1
chr16:67229631|67229857 hsa-miR-1229-3p 0 0 1
chr16:67229631|67229857 hsa-miR-1237-5p 0 0 1
chr16:67229631|67229857 hsa-miR-1237-3p 0 0 1
chr16:67229631|67229857 hsa-miR-1205 0 0 1
chr16:67229631|67229857 hsa-miR-1248 0 0 1
chr16:67229631|67229857 hsa-miR-1288-5p 0 0 1
chr16:67229631|67229857 hsa-miR-1288-3p 0 0 1
chr16:67229631|67229857 hsa-miR-1292-5p 0 0 1
chr16:67229631|67229857 hsa-miR-1292-3p 0 0 1
chr16:67229631|67229857 hsa-miR-1825 0 0 1
chr16:67229631|67229857 hsa-miR-125a-3p 0 0 1
chr16:67229631|67229857 hsa-miR-491-5p 0 0 1
chr16:67229631|67229857 hsa-miR-615-3p 0 0 1
chr16:67229631|67229857 hsa-miR-296-3p 0 0 1
chr16:67229631|67229857 hsa-miR-767-5p 0 0 1
chr16:67229631|67229857 hsa-miR-654-5p 0 0 1
chr16:67229631|67229857 hsa-miR-515-3p 0 0 1
chr16:67229631|67229857 hsa-miR-34c-5p 0 0 1
chr16:67229631|67229857 hsa-miR-509-3-5p 0 0 1
chr16:67229631|67229857 hsa-miR-509-5p 0 0 1
chr16:67229631|67229857 hsa-miR-550 0 0 1
chr16:67229631|67229857 hsa-miR-16 0 0 1
chr16:67229631|67229857 hsa-miR-124 0 0 1
chr16:67229631|67229857 hsa-miR-768-5p 0 0 1
chr16:67229631|67229857 hsa-miR-220a 0 0 1
chr16:67229631|67229857 hsa-miR-608 1 0 0
chr16:67229631|67229857 hsa-miR-636 1 0 0
chr16:67229631|67229857 hsa-miR-639 1 0 0
chr16:67229631|67229857 hsa-miR-1183 1 0 0
chr16:67229631|67229857 hsa-miR-3138 1 0 0
chr16:67229631|67229857 hsa-miR-3147 1 0 0
chr16:67229631|67229857 hsa-miR-4298 1 0 0
chr16:67229631|67229857 hsa-miR-4322 1 0 0
chr16:67229631|67229857 hsa-miR-3665 1 0 0
chr16:67229631|67229857 hsa-miR-4440 1 0 0
chr16:67229631|67229857 hsa-miR-4449 1 0 0
chr16:67229631|67229857 hsa-miR-3689c 1 0 0
chr16:67229631|67229857 hsa-miR-4507 1 0 0
chr16:67229631|67229857 hsa-miR-4651 1 0 0
chr16:67229631|67229857 hsa-miR-5090 1 0 0
chr16:67229631|67229857 hsa-miR-5194 1 0 0
chr16:67229631|67229857 hsa-miR-6860 1 0 0
chr16:67229631|67229857 hsa-miR-211-3p 1 0 0
chr16:67229631|67229857 hsa-miR-6861-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6854-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6721-5p 1 0 0
chr16:67229631|67229857 hsa-miR-197-5p 1 0 0
chr16:67229631|67229857 hsa-miR-7845-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6796-5p 1 0 0
chr16:67229631|67229857 hsa-miR-23a-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6798-5p 1 0 0
chr16:67229631|67229857 hsa-miR-2467-3p 1 0 0
chr16:67229631|67229857 hsa-miR-6782-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6786-5p 1 0 0
chr16:67229631|67229857 hsa-miR-7109-5p 1 0 0
chr16:67229631|67229857 hsa-miR-193b-5p 1 0 0
chr16:67229631|67229857 hsa-miR-885-3p 1 0 0
chr16:67229631|67229857 hsa-miR-6771-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6823-5p 1 0 0
chr16:67229631|67229857 hsa-miR-584-3p 1 0 0
chr16:67229631|67229857 hsa-miR-3670 1 0 0
chr16:67229631|67229857 hsa-miR-1207-5p 1 0 0
chr16:67229631|67229857 hsa-miR-1233-5p 1 0 0
chr16:67229631|67229857 hsa-miR-1273h-5p 1 0 0
chr16:67229631|67229857 hsa-miR-3689b-3p 1 0 0
chr16:67229631|67229857 hsa-miR-4763-3p 1 0 0
chr16:67229631|67229857 hsa-miR-6769b-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6778-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6812-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6737-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6743-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6752-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6754-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6756-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6803-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6819-5p 1 0 0
chr16:67229631|67229857 hsa-miR-7110-5p 1 0 0
chr16:67229631|67229857 hsa-miR-1249-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6722-3p 1 0 0
chr16:67229631|67229857 hsa-miR-6751-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6763-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6779-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6879-5p 1 0 0
chr16:67229631|67229857 hsa-miR-328-5p 1 0 0
chr16:67229631|67229857 hsa-miR-449c-5p 1 0 0
chr16:67229631|67229857 hsa-miR-4632-5p 1 0 0
chr16:67229631|67229857 hsa-miR-4726-5p 1 0 0
chr16:67229631|67229857 hsa-miR-4749-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6795-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6846-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6887-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6885-5p 1 0 0
chr16:67229631|67229857 hsa-miR-4665-5p 1 0 0
chr16:67229631|67229857 hsa-miR-6855-5p 1 0 0
chr16:67229631|67229857 hsa-miR-4472 1 0 0
chr16:67229631|67229857 hsa-miR-550a-5p 1 0 0
chr16:67229631|67229857 hsa-miR-4691-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:67229631|67229857
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MNPINPLQPCSVPAVRRTLKSGLGDDLVQALGLSKGPGLEV
Nucleotide Sequence CTGAACCCCATCAACCCCCTCCAACCCTGCTCTGTCCCTGCAGTGAGAAGGACGTTGAAGAGTGGGCTCGGAGATGACCTGGTGCAGGCACTGGGACTAAGCAAGGGTCCTGGCCTGGAGGTGTGA
CircID chr16:67229631|67229857
ORF Type ORF2
Protein Length 49
Nucleotide Length 150
Protein Sequence MLGNASVPAATASLVSNPPQSHCPPEPHQPPPTLLCPCSEKDVEEWARR
Nucleotide Sequence CTGCTAGGGAACGCAAGCGTTCCCGCGGCAACCGCAAGTCTTGTAAGTAACCCCCCACAATCCCACTGCCCACCTGAACCCCATCAACCCCCTCCAACCCTGCTCTGTCCCTGCAGTGAGAAGGACGTTGAAGAGTGGGCTCGGAGATGA
CircID chr16:67229631|67229857
ORF Type ORF3
Protein Length 57
Nucleotide Length 174
Protein Sequence MLSPSACTRSSPSPLFNVLLTAGTEQGWRGLMGFRWAVGLWGVTYKTCGCRGNACVP
Nucleotide Sequence TTGCTTAGTCCCAGTGCCTGCACCAGGTCATCTCCGAGCCCACTCTTCAACGTCCTTCTCACTGCAGGGACAGAGCAGGGTTGGAGGGGGTTGATGGGGTTCAGGTGGGCAGTGGGATTGTGGGGGGTTACTTACAAGACTTGCGGTTGCCGCGGGAACGCTTGCGTTCCCTAG
CircID chr16:67229631|67229857
ORF Type ORF4
Protein Length 61
Nucleotide Length 183
Protein Sequence MHQVISEPTLQRPSHCRDRAGLEGVDGVQVGSGIVGGYLQDLRLPRERLRSLAAKARGLLL
Nucleotide Sequence CTGCACCAGGTCATCTCCGAGCCCACTCTTCAACGTCCTTCTCACTGCAGGGACAGAGCAGGGTTGGAGGGGGTTGATGGGGTTCAGGTGGGCAGTGGGATTGTGGGGGGTTACTTACAAGACTTGCGGTTGCCGCGGGAACGCTTGCGTTCCCTAGCAGCTAAGGCACGAGGACTGCTCTTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab