CircRNA Information

General Information
circRNA Basic Information
CircID chr16:67402375|67402541
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCAGTAGACAGCTGAATGAATGACCCTGGGGGTGAGGCGGGAGAAGAGTTGGAGCAGGCAGGGAGTAAATGTTTGCCCTCATTCAGTGTCTGAAGAGTGGATGGCATGGTGAGCACAGTAGCTGGTGATAGCAGAGAGGTTTGGGAGGAGCCAGAGGGAAAGGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:67402375|67402541 hsa-miR-204-5p 0 0 1
chr16:67402375|67402541 hsa-miR-204-3p 0 0 1
chr16:67402375|67402541 hsa-miR-211-5p 0 0 1
chr16:67402375|67402541 hsa-miR-211-3p 0 0 1
chr16:67402375|67402541 hsa-miR-149-5p 0 0 1
chr16:67402375|67402541 hsa-miR-149-3p 0 0 1
chr16:67402375|67402541 hsa-miR-150-5p 0 0 1
chr16:67402375|67402541 hsa-miR-150-3p 0 0 1
chr16:67402375|67402541 hsa-miR-626 0 0 1
chr16:67402375|67402541 hsa-miR-1298-5p 0 0 1
chr16:67402375|67402541 hsa-miR-1298-3p 0 0 1
chr16:67402375|67402541 hsa-miR-892a 0 0 1
chr16:67402375|67402541 hsa-miR-934 0 0 1
chr16:67402375|67402541 hsa-miR-942-5p 0 0 1
chr16:67402375|67402541 hsa-miR-942-3p 0 0 1
chr16:67402375|67402541 hsa-miR-1178-5p 0 0 1
chr16:67402375|67402541 hsa-miR-1178-3p 0 0 1
chr16:67402375|67402541 hsa-miR-1226-5p 0 0 1
chr16:67402375|67402541 hsa-miR-1226-3p 0 0 1
chr16:67402375|67402541 hsa-miR-1324 0 0 1
chr16:67402375|67402541 hsa-miR-361-3p 0 1 1
chr16:67402375|67402541 hsa-miR-1207-3p 0 0 1
chr16:67402375|67402541 hsa-miR-642 0 0 1
chr16:67402375|67402541 hsa-miR-664 0 0 1
chr16:67402375|67402541 hsa-miR-326 1 0 0
chr16:67402375|67402541 hsa-miR-346 1 0 0
chr16:67402375|67402541 hsa-miR-636 1 0 0
chr16:67402375|67402541 hsa-miR-1248 1 0 0
chr16:67402375|67402541 hsa-miR-1976 1 0 0
chr16:67402375|67402541 hsa-miR-718 1 0 0
chr16:67402375|67402541 hsa-miR-4326 1 0 0
chr16:67402375|67402541 hsa-miR-4469 1 0 0
chr16:67402375|67402541 hsa-miR-4663 1 0 0
chr16:67402375|67402541 hsa-miR-6749-3p 1 1 0
chr16:67402375|67402541 hsa-miR-3194-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6747-3p 0 1 0
chr16:67402375|67402541 hsa-miR-6822-3p 1 0 0
chr16:67402375|67402541 hsa-miR-766-3p 1 0 0
chr16:67402375|67402541 hsa-miR-593-5p 1 0 0
chr16:67402375|67402541 hsa-miR-6875-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6873-3p 1 1 0
chr16:67402375|67402541 hsa-miR-6849-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6841-3p 1 0 0
chr16:67402375|67402541 hsa-miR-1915-5p 1 0 0
chr16:67402375|67402541 hsa-miR-6832-3p 1 0 0
chr16:67402375|67402541 hsa-miR-877-3p 1 0 0
chr16:67402375|67402541 hsa-miR-3194-5p 1 0 0
chr16:67402375|67402541 hsa-miR-6728-3p 1 0 0
chr16:67402375|67402541 hsa-miR-3691-3p 1 0 0
chr16:67402375|67402541 hsa-miR-4713-5p 1 0 0
chr16:67402375|67402541 hsa-miR-4436b-5p 1 0 0
chr16:67402375|67402541 hsa-miR-6772-3p 1 0 0
chr16:67402375|67402541 hsa-miR-4793-5p 1 0 0
chr16:67402375|67402541 hsa-miR-4763-5p 1 0 0
chr16:67402375|67402541 hsa-miR-6894-3p 1 1 0
chr16:67402375|67402541 hsa-miR-6803-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6514-3p 1 0 0
chr16:67402375|67402541 hsa-miR-7113-3p 1 1 0
chr16:67402375|67402541 hsa-miR-3191-5p 1 0 0
chr16:67402375|67402541 hsa-miR-7111-3p 1 0 0
chr16:67402375|67402541 hsa-miR-1266-3p 1 0 0
chr16:67402375|67402541 hsa-miR-4446-5p 1 0 0
chr16:67402375|67402541 hsa-miR-4640-3p 1 0 0
chr16:67402375|67402541 hsa-miR-339-5p 1 0 0
chr16:67402375|67402541 hsa-miR-1237-3p 1 0 0
chr16:67402375|67402541 hsa-miR-1236-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6743-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6811-3p 1 0 0
chr16:67402375|67402541 hsa-miR-7106-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6828-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6867-3p 1 0 0
chr16:67402375|67402541 hsa-miR-2276-5p 1 0 0
chr16:67402375|67402541 hsa-miR-6752-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6895-3p 1 0 0
chr16:67402375|67402541 hsa-miR-1914-5p 1 0 0
chr16:67402375|67402541 hsa-miR-6777-3p 0 1 0
chr16:67402375|67402541 hsa-miR-6883-3p 1 0 0
chr16:67402375|67402541 hsa-miR-130b-5p 0 1 0
chr16:67402375|67402541 hsa-miR-3670 1 0 0
chr16:67402375|67402541 hsa-miR-3620-3p 1 0 0
chr16:67402375|67402541 hsa-miR-1229-3p 1 0 0
chr16:67402375|67402541 hsa-miR-767-3p 1 0 0
chr16:67402375|67402541 hsa-miR-3173-5p 1 0 0
chr16:67402375|67402541 hsa-miR-6734-3p 1 0 0
chr16:67402375|67402541 hsa-miR-3177-5p 1 0 0
chr16:67402375|67402541 hsa-miR-6812-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6800-3p 0 1 0
chr16:67402375|67402541 hsa-miR-6510-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6731-3p 1 0 0
chr16:67402375|67402541 hsa-miR-4685-3p 1 0 0
chr16:67402375|67402541 hsa-miR-3085-5p 1 0 0
chr16:67402375|67402541 hsa-miR-5008-3p 1 0 0
chr16:67402375|67402541 hsa-miR-10398-5p 1 0 0
chr16:67402375|67402541 hsa-miR-4722-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6727-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6893-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6511a-3p 1 1 0
chr16:67402375|67402541 hsa-miR-6792-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6801-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6805-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6829-3p 1 0 0
chr16:67402375|67402541 hsa-miR-9851-3p 1 0 0
chr16:67402375|67402541 hsa-miR-3059-5p 1 0 0
chr16:67402375|67402541 hsa-miR-4723-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6511b-3p 0 1 0
chr16:67402375|67402541 hsa-miR-6769b-3p 0 1 0
chr16:67402375|67402541 hsa-miR-3085-3p 1 0 0
chr16:67402375|67402541 hsa-miR-4691-5p 1 0 0
chr16:67402375|67402541 hsa-miR-4768-5p 1 0 0
chr16:67402375|67402541 hsa-miR-6764-5p 0 1 0
chr16:67402375|67402541 hsa-miR-6827-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6833-3p 0 1 0
chr16:67402375|67402541 hsa-miR-6824-3p 1 0 0
chr16:67402375|67402541 hsa-miR-6737-3p 1 1 0
chr16:67402375|67402541 hsa-miR-6764-3p 1 0 0
chr16:67402375|67402541 hsa-miR-4724-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:67402375|67402541
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MNDPGGEAGEELEQAGSKCLPSFSV
Nucleotide Sequence ATGAATGACCCTGGGGGTGAGGCGGGAGAAGAGTTGGAGCAGGCAGGGAGTAAATGTTTGCCCTCATTCAGTGTCTGA
CircID chr16:67402375|67402541
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MTLGVRREKSWSRQGVNVCPHSVSEEWMAW
Nucleotide Sequence ATGACCCTGGGGGTGAGGCGGGAGAAGAGTTGGAGCAGGCAGGGAGTAAATGTTTGCCCTCATTCAGTGTCTGAAGAGTGGATGGCATGGTGA
CircID chr16:67402375|67402541
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MRANIYSLPAPTLLPPHPQGHSFSCLL
Nucleotide Sequence ATGAGGGCAAACATTTACTCCCTGCCTGCTCCAACTCTTCTCCCGCCTCACCCCCAGGGTCATTCATTCAGCTGTCTACTG
CircID chr16:67402375|67402541
ORF Type ORF4
Protein Length 45
Nucleotide Length 135
Protein Sequence MLSPATVLTMPSTLQTLNEGKHLLPACSNSSPASPPGSFIQLSTE
Nucleotide Sequence CTGCTATCACCAGCTACTGTGCTCACCATGCCATCCACTCTTCAGACACTGAATGAGGGCAAACATTTACTCCCTGCCTGCTCCAACTCTTCTCCCGCCTCACCCCCAGGGTCATTCATTCAGCTGTCTACTGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab