CircRNA Information

General Information
circRNA Basic Information
CircID chr16:67446849|67447032
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTTATCCAAGTGATCCCACAACCACTAGCATTACCAGCCCCACTGTCAGAGCAGATAAGGCCCAGAGAGGGCCAGCACCAGGCCCTAACACACCACAAAGCAGAGGAGCTCCACGTCCCCATGGCCAATGTCCACACACCTCCACCCATGACCAGGGCCCCCTGCCTGGCTCTACATACCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:67446849|67447032 hsa-miR-155-5p 0 0 1
chr16:67446849|67447032 hsa-miR-155-3p 0 0 1
chr16:67446849|67447032 hsa-miR-328-5p 0 0 1
chr16:67446849|67447032 hsa-miR-328-3p 0 0 1
chr16:67446849|67447032 hsa-miR-326 0 1 1
chr16:67446849|67447032 hsa-miR-588 0 0 1
chr16:67446849|67447032 hsa-miR-612 0 0 1
chr16:67446849|67447032 hsa-miR-638 0 0 1
chr16:67446849|67447032 hsa-miR-1296-5p 0 0 1
chr16:67446849|67447032 hsa-miR-1296-3p 0 0 1
chr16:67446849|67447032 hsa-miR-890 0 0 1
chr16:67446849|67447032 hsa-miR-940 0 1 1
chr16:67446849|67447032 hsa-miR-1291 0 0 1
chr16:67446849|67447032 hsa-miR-1293 0 0 1
chr16:67446849|67447032 hsa-miR-1258 0 0 1
chr16:67446849|67447032 hsa-miR-1261 0 0 1
chr16:67446849|67447032 hsa-miR-140-5p 0 0 1
chr16:67446849|67447032 hsa-miR-767-3p 0 0 1
chr16:67446849|67447032 hsa-miR-1207-5p 1 1 1
chr16:67446849|67447032 hsa-miR-769-3p 0 1 1
chr16:67446849|67447032 hsa-miR-330-5p 0 1 1
chr16:67446849|67447032 hsa-miR-450b-3p 0 0 1
chr16:67446849|67447032 hsa-miR-1308 0 0 1
chr16:67446849|67447032 hsa-miR-644 0 0 1
chr16:67446849|67447032 hsa-miR-1285 0 0 1
chr16:67446849|67447032 hsa-miR-453 0 0 1
chr16:67446849|67447032 hsa-miR-147 0 0 1
chr16:67446849|67447032 hsa-miR-147a 0 1 0
chr16:67446849|67447032 hsa-miR-637 1 0 0
chr16:67446849|67447032 hsa-miR-762 1 0 0
chr16:67446849|67447032 hsa-miR-760 1 0 0
chr16:67446849|67447032 hsa-miR-1268a 1 0 0
chr16:67446849|67447032 hsa-miR-2861 1 1 0
chr16:67446849|67447032 hsa-miR-3132 1 0 0
chr16:67446849|67447032 hsa-miR-3138 1 1 0
chr16:67446849|67447032 hsa-miR-3139 1 0 0
chr16:67446849|67447032 hsa-miR-4322 1 0 0
chr16:67446849|67447032 hsa-miR-4265 1 0 0
chr16:67446849|67447032 hsa-miR-3652 1 0 0
chr16:67446849|67447032 hsa-miR-3907 1 0 0
chr16:67446849|67447032 hsa-miR-3911 1 1 0
chr16:67446849|67447032 hsa-miR-1268b 1 0 0
chr16:67446849|67447032 hsa-miR-4450 1 0 0
chr16:67446849|67447032 hsa-miR-4460 1 1 0
chr16:67446849|67447032 hsa-miR-4488 1 0 0
chr16:67446849|67447032 hsa-miR-4489 1 0 0
chr16:67446849|67447032 hsa-miR-4491 1 0 0
chr16:67446849|67447032 hsa-miR-4498 1 1 0
chr16:67446849|67447032 hsa-miR-4507 1 0 0
chr16:67446849|67447032 hsa-miR-4508 1 0 0
chr16:67446849|67447032 hsa-miR-4526 1 1 0
chr16:67446849|67447032 hsa-miR-1587 1 0 0
chr16:67446849|67447032 hsa-miR-4651 1 0 0
chr16:67446849|67447032 hsa-miR-4657 1 0 0
chr16:67446849|67447032 hsa-miR-4673 1 1 0
chr16:67446849|67447032 hsa-miR-4683 1 0 0
chr16:67446849|67447032 hsa-miR-5572 1 0 0
chr16:67446849|67447032 hsa-miR-5698 1 0 0
chr16:67446849|67447032 hsa-miR-5787 1 0 0
chr16:67446849|67447032 hsa-miR-6085 1 0 0
chr16:67446849|67447032 hsa-miR-6860 1 0 0
chr16:67446849|67447032 hsa-miR-8089 1 0 0
chr16:67446849|67447032 hsa-miR-12114 1 1 0
chr16:67446849|67447032 hsa-miR-12115 1 0 0
chr16:67446849|67447032 hsa-miR-127-5p 1 0 0
chr16:67446849|67447032 hsa-miR-92a-2-5p 0 1 0
chr16:67446849|67447032 hsa-miR-3194-3p 1 0 0
chr16:67446849|67447032 hsa-miR-6747-5p 1 1 0
chr16:67446849|67447032 hsa-miR-7106-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6825-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6799-5p 1 0 0
chr16:67446849|67447032 hsa-miR-7114-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6515-5p 1 0 0
chr16:67446849|67447032 hsa-miR-1225-3p 1 0 0
chr16:67446849|67447032 hsa-miR-6880-5p 1 1 0
chr16:67446849|67447032 hsa-miR-6741-5p 1 0 0
chr16:67446849|67447032 hsa-miR-3622b-5p 1 0 0
chr16:67446849|67447032 hsa-miR-3187-3p 1 1 0
chr16:67446849|67447032 hsa-miR-197-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6873-3p 0 1 0
chr16:67446849|67447032 hsa-miR-6742-5p 0 1 0
chr16:67446849|67447032 hsa-miR-3151-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6748-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6772-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6796-5p 1 1 0
chr16:67446849|67447032 hsa-miR-185-3p 1 1 0
chr16:67446849|67447032 hsa-miR-6732-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6805-5p 1 0 0
chr16:67446849|67447032 hsa-miR-23a-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6798-5p 1 0 0
chr16:67446849|67447032 hsa-miR-942-5p 0 1 0
chr16:67446849|67447032 hsa-miR-6782-5p 1 0 0
chr16:67446849|67447032 hsa-miR-4793-3p 1 0 0
chr16:67446849|67447032 hsa-miR-6810-5p 0 1 0
chr16:67446849|67447032 hsa-miR-6786-5p 1 0 0
chr16:67446849|67447032 hsa-miR-939-3p 1 0 0
chr16:67446849|67447032 hsa-miR-7109-5p 1 0 0
chr16:67446849|67447032 hsa-miR-1226-5p 1 0 0
chr16:67446849|67447032 hsa-miR-4786-3p 1 0 0
chr16:67446849|67447032 hsa-miR-4640-5p 1 0 0
chr16:67446849|67447032 hsa-miR-885-3p 1 0 0
chr16:67446849|67447032 hsa-miR-3191-5p 0 1 0
chr16:67446849|67447032 hsa-miR-3677-3p 1 0 0
chr16:67446849|67447032 hsa-miR-4732-5p 0 1 0
chr16:67446849|67447032 hsa-miR-6749-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6780a-3p 0 1 0
chr16:67446849|67447032 hsa-miR-4787-5p 1 0 0
chr16:67446849|67447032 hsa-miR-4446-3p 1 0 0
chr16:67446849|67447032 hsa-miR-194-3p 1 1 0
chr16:67446849|67447032 hsa-miR-3191-3p 1 1 0
chr16:67446849|67447032 hsa-miR-744-5p 1 0 0
chr16:67446849|67447032 hsa-miR-3670 1 0 0
chr16:67446849|67447032 hsa-miR-4763-3p 1 1 0
chr16:67446849|67447032 hsa-miR-6769b-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6787-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6812-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6816-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6737-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6743-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6752-5p 1 1 0
chr16:67446849|67447032 hsa-miR-6756-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6803-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6813-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6819-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6842-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6851-5p 1 1 0
chr16:67446849|67447032 hsa-miR-7110-5p 1 0 0
chr16:67446849|67447032 hsa-miR-10401-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6722-3p 1 0 0
chr16:67446849|67447032 hsa-miR-6751-5p 1 0 0
chr16:67446849|67447032 hsa-miR-7111-5p 1 0 0
chr16:67446849|67447032 hsa-miR-3620-5p 1 0 0
chr16:67446849|67447032 hsa-miR-10396a-5p 1 0 0
chr16:67446849|67447032 hsa-miR-1237-5p 1 0 0
chr16:67446849|67447032 hsa-miR-449c-5p 1 0 0
chr16:67446849|67447032 hsa-miR-4649-5p 1 0 0
chr16:67446849|67447032 hsa-miR-4701-3p 1 0 0
chr16:67446849|67447032 hsa-miR-4726-5p 1 0 0
chr16:67446849|67447032 hsa-miR-4745-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6729-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6846-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6848-5p 1 0 0
chr16:67446849|67447032 hsa-miR-939-5p 1 0 0
chr16:67446849|67447032 hsa-miR-3198 1 0 0
chr16:67446849|67447032 hsa-miR-6736-5p 1 0 0
chr16:67446849|67447032 hsa-miR-3679-5p 1 0 0
chr16:67446849|67447032 hsa-miR-3689d 0 1 0
chr16:67446849|67447032 hsa-miR-6849-5p 1 0 0
chr16:67446849|67447032 hsa-miR-6724-5p 1 0 0
chr16:67446849|67447032 hsa-miR-4723-3p 0 1 0
chr16:67446849|67447032 hsa-miR-33b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:67446849|67447032
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MSEQIRPREGQHQALTHHKAEELHVPMANVHTPPPMTRAPCLALHTP
Nucleotide Sequence CTGTCAGAGCAGATAAGGCCCAGAGAGGGCCAGCACCAGGCCCTAACACACCACAAAGCAGAGGAGCTCCACGTCCCCATGGCCAATGTCCACACACCTCCACCCATGACCAGGGCCCCCTGCCTGGCTCTACATACCCCA
CircID chr16:67446849|67447032
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MLCGVLGPGAGPLWALSALTVGLVMLVVVGSLG
Nucleotide Sequence CTGCTTTGTGGTGTGTTAGGGCCTGGTGCTGGCCCTCTCTGGGCCTTATCTGCTCTGACAGTGGGGCTGGTAATGCTAGTGGTTGTGGGATCACTTGGATAA
CircID chr16:67446849|67447032
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MVMGGGVWTLAMGTWSSSALWCVRAWCWPSLGLICSDSGAGNASGCGITWI
Nucleotide Sequence CTGGTCATGGGTGGAGGTGTGTGGACATTGGCCATGGGGACGTGGAGCTCCTCTGCTTTGTGGTGTGTTAGGGCCTGGTGCTGGCCCTCTCTGGGCCTTATCTGCTCTGACAGTGGGGCTGGTAATGCTAGTGGTTGTGGGATCACTTGGATA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab