CircRNA Information

General Information
circRNA Basic Information
CircID chr16:67930901|67931030
Strand +
CircType exon
Host Gene ENSG00000141086.16;
Algorism CIRI2;
Sequence CCCCACTCTGACCTCTGAGCCCTGACCACAGGACAGCAGCGGCTTCCACTTCTGCGGTGGTTCTCTCATCAGCCAGTCCTGGGTGGTCACTGCTGCCCACTGCAATGTCAGGTGAGTGCCTGCATTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:67930901|67931030 hsa-miR-206 0 0 1
chr16:67930901|67931030 hsa-miR-589-5p 0 0 1
chr16:67930901|67931030 hsa-miR-589-3p 0 0 1
chr16:67930901|67931030 hsa-miR-613 0 0 1
chr16:67930901|67931030 hsa-miR-626 0 0 1
chr16:67930901|67931030 hsa-miR-298 0 1 1
chr16:67930901|67931030 hsa-miR-892b 0 0 1
chr16:67930901|67931030 hsa-miR-671-5p 0 0 1
chr16:67930901|67931030 hsa-miR-1 0 0 1
chr16:67930901|67931030 hsa-miR-24 0 0 1
chr16:67930901|67931030 hsa-miR-657 1 0 0
chr16:67930901|67931030 hsa-miR-3138 1 0 0
chr16:67930901|67931030 hsa-miR-3929 1 1 0
chr16:67930901|67931030 hsa-miR-4437 1 1 0
chr16:67930901|67931030 hsa-miR-4526 1 0 0
chr16:67930901|67931030 hsa-miR-4656 1 0 0
chr16:67930901|67931030 hsa-miR-4710 1 0 0
chr16:67930901|67931030 hsa-miR-4721 1 0 0
chr16:67930901|67931030 hsa-miR-4734 1 0 0
chr16:67930901|67931030 hsa-miR-8075 0 1 0
chr16:67930901|67931030 hsa-miR-6840-3p 0 1 0
chr16:67930901|67931030 hsa-miR-6727-5p 1 0 0
chr16:67930901|67931030 hsa-miR-6806-5p 1 0 0
chr16:67930901|67931030 hsa-miR-6765-3p 1 0 0
chr16:67930901|67931030 hsa-miR-5088-5p 1 1 0
chr16:67930901|67931030 hsa-miR-1229-5p 1 0 0
chr16:67930901|67931030 hsa-miR-6784-5p 1 0 0
chr16:67930901|67931030 hsa-miR-3127-5p 1 1 0
chr16:67930901|67931030 hsa-miR-6516-5p 0 1 0
chr16:67930901|67931030 hsa-miR-3925-5p 0 1 0
chr16:67930901|67931030 hsa-miR-3158-5p 0 1 0
chr16:67930901|67931030 hsa-miR-194-3p 0 1 0
chr16:67930901|67931030 hsa-miR-664b-5p 1 0 0
chr16:67930901|67931030 hsa-miR-6719-3p 0 1 0
chr16:67930901|67931030 hsa-miR-4712-3p 0 1 0
chr16:67930901|67931030 hsa-miR-10396a-5p 1 0 0
chr16:67930901|67931030 hsa-miR-10396b-5p 1 0 0
chr16:67930901|67931030 hsa-miR-4685-5p 1 1 0
chr16:67930901|67931030 hsa-miR-3199 0 1 0
chr16:67930901|67931030 hsa-miR-1266-5p 1 0 0
chr16:67930901|67931030 hsa-miR-6511b-5p 1 0 0
chr16:67930901|67931030 hsa-miR-6856-5p 1 0 0
chr16:67930901|67931030 hsa-miR-6718-5p 1 0 0
chr16:67930901|67931030 hsa-miR-509-3-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr16:67930901|67931030
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MTTGQQRLPLLRWFSHQPVLGGHCCPLQCQVSACIP
Nucleotide Sequence CTGACCACAGGACAGCAGCGGCTTCCACTTCTGCGGTGGTTCTCTCATCAGCCAGTCCTGGGTGGTCACTGCTGCCCACTGCAATGTCAGGTGAGTGCCTGCATTCCA

CircID chr16:67930901|67931030
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MSPDHRTAAASTSAVVLSSASPGWSLLPTAMSGECLHS
Nucleotide Sequence CTGAGCCCTGACCACAGGACAGCAGCGGCTTCCACTTCTGCGGTGGTTCTCTCATCAGCCAGTCCTGGGTGGTCACTGCTGCCCACTGCAATGTCAGGTGAGTGCCTGCATTCC

CircID chr16:67930901|67931030
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MADERTTAEVEAAAVLWSGLRGQSG
Nucleotide Sequence CTGGCTGATGAGAGAACCACCGCAGAAGTGGAAGCCGCTGCTGTCCTGTGGTCAGGGCTCAGAGGTCAGAGTGGG

CircID chr16:67930901|67931030
ORF Type ORF4
Protein Length 37
Nucleotide Length 111
Protein Sequence MTLQWAAVTTQDWLMREPPQKWKPLLSCGQGSEVRVG
Nucleotide Sequence CTGACATTGCAGTGGGCAGCAGTGACCACCCAGGACTGGCTGATGAGAGAACCACCGCAGAAGTGGAAGCCGCTGCTGTCCTGTGGTCAGGGCTCAGAGGTCAGAGTGGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites