CircNet

General Information

circRNA Basic Information

CircID	chr16:69284048\|69284244
Strand	+
CircType	exon
Host Gene	ENSG00000168807.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTTGGTTCATTCTGGCTCCGGATGTCGATCCCCCTCCCTTGGATCTGACCTTACATTTGCTACCAGGACAGGCTCTCGACAGGGCATTGAGATGCATCTCTTCAGGGTGGAGACACATCGGGATCTGTCATCCTGGACCAGGATACTTGTTCAGGGTTGCCATGCTGCTGCTGAGCTGATCAAGGAAGTCTCTCTAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:69284048\|69284244	hsa-miR-143-5p	0	0	1
chr16:69284048\|69284244	hsa-miR-143-3p	0	0	1
chr16:69284048\|69284244	hsa-miR-149-5p	0	0	1
chr16:69284048\|69284244	hsa-miR-149-3p	0	0	1
chr16:69284048\|69284244	hsa-miR-484	0	0	1
chr16:69284048\|69284244	hsa-miR-558	0	0	1
chr16:69284048\|69284244	hsa-miR-623	0	0	1
chr16:69284048\|69284244	hsa-miR-659-5p	0	0	1
chr16:69284048\|69284244	hsa-miR-659-3p	0	0	1
chr16:69284048\|69284244	hsa-miR-1298-5p	0	0	1
chr16:69284048\|69284244	hsa-miR-1298-3p	0	0	1
chr16:69284048\|69284244	hsa-miR-1236-5p	0	0	1
chr16:69284048\|69284244	hsa-miR-1236-3p	0	0	1
chr16:69284048\|69284244	hsa-miR-1251-5p	0	0	1
chr16:69284048\|69284244	hsa-miR-1251-3p	0	0	1
chr16:69284048\|69284244	hsa-miR-1256	0	1	1
chr16:69284048\|69284244	hsa-miR-296-3p	0	0	1
chr16:69284048\|69284244	hsa-miR-1538	1	0	0
chr16:69284048\|69284244	hsa-miR-3155a	0	1	0
chr16:69284048\|69284244	hsa-miR-4436a	0	1	0
chr16:69284048\|69284244	hsa-miR-4438	0	1	0
chr16:69284048\|69284244	hsa-miR-3155b	0	1	0
chr16:69284048\|69284244	hsa-miR-4518	0	1	0
chr16:69284048\|69284244	hsa-miR-4663	0	1	0
chr16:69284048\|69284244	hsa-miR-4739	1	0	0
chr16:69284048\|69284244	hsa-miR-6745	0	1	0
chr16:69284048\|69284244	hsa-miR-93-3p	0	1	0
chr16:69284048\|69284244	hsa-miR-1915-5p	1	0	0
chr16:69284048\|69284244	hsa-miR-6782-5p	1	0	0
chr16:69284048\|69284244	hsa-miR-4640-5p	1	0	0
chr16:69284048\|69284244	hsa-miR-6753-5p	1	0	0
chr16:69284048\|69284244	hsa-miR-3614-5p	1	0	0
chr16:69284048\|69284244	hsa-miR-6823-5p	1	1	0
chr16:69284048\|69284244	hsa-miR-6501-5p	1	1	0
chr16:69284048\|69284244	hsa-miR-3690	0	1	0
chr16:69284048\|69284244	hsa-miR-4776-5p	1	1	0
chr16:69284048\|69284244	hsa-miR-3189-3p	0	1	0
chr16:69284048\|69284244	hsa-miR-3619-3p	1	0	0
chr16:69284048\|69284244	hsa-miR-4746-3p	1	0	0
chr16:69284048\|69284244	hsa-miR-6503-3p	1	0	0
chr16:69284048\|69284244	hsa-miR-6775-5p	1	0	0
chr16:69284048\|69284244	hsa-miR-4685-3p	0	1	0
chr16:69284048\|69284244	hsa-miR-642b-3p	0	1	0
chr16:69284048\|69284244	hsa-miR-6729-5p	1	0	0
chr16:69284048\|69284244	hsa-miR-3085-3p	1	0	0
chr16:69284048\|69284244	hsa-miR-10397-5p	1	0	0
chr16:69284048\|69284244	hsa-miR-363-5p	0	1	0
chr16:69284048\|69284244	hsa-miR-642a-3p	0	1	0
chr16:69284048\|69284244	hsa-miR-375-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:69284048\|69284244
ORF Type	ORF1
Protein Length	39
Nucleotide Length	117
Protein Sequence	MCLHPEEMHLNALSRACPGSKCKVRSKGGGSTSGARMNQ
Nucleotide Sequence	ATGTGTCTCCACCCTGAAGAGATGCATCTCAATGCCCTGTCGAGAGCCTGTCCTGGTAGCAAATGTAAGGTCAGATCCAAGGGAGGGGGATCGACATCCGGAGCCAGAATGAACCAA

CircID	chr16:69284048\|69284244
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MHLFRVETHRDLSSWTRILVQGCHAAAELIKEVSL
Nucleotide Sequence	ATGCATCTCTTCAGGGTGGAGACACATCGGGATCTGTCATCCTGGACCAGGATACTTGTTCAGGGTTGCCATGCTGCTGCTGAGCTGATCAAGGAAGTCTCTCTA

CircID	chr16:69284048\|69284244
ORF Type	ORF2
Protein Length	44
Nucleotide Length	135
Protein Sequence	MVQDDRSRCVSTLKRCISMPCREPVLVANVRSDPREGDRHPEPE
Nucleotide Sequence	CTGGTCCAGGATGACAGATCCCGATGTGTCTCCACCCTGAAGAGATGCATCTCAATGCCCTGTCGAGAGCCTGTCCTGGTAGCAAATGTAAGGTCAGATCCAAGGGAGGGGGATCGACATCCGGAGCCAGAATGA

CircID	chr16:69284048\|69284244
ORF Type	ORF3
Protein Length	65
Nucleotide Length	195
Protein Sequence	LVHSGSGCRSPSLGSDLTFATRTGSRQGIEMHLFRVETHRDLSSWTRILVQGCHAAAELIKEVSL
Nucleotide Sequence	TTGGTTCATTCTGGCTCCGGATGTCGATCCCCCTCCCTTGGATCTGACCTTACATTTGCTACCAGGACAGGCTCTCGACAGGGCATTGAGATGCATCTCTTCAGGGTGGAGACACATCGGGATCTGTCATCCTGGACCAGGATACTTGTTCAGGGTTGCCATGCTGCTGCTGAGCTGATCAAGGAAGTCTCTCTA

CircID	chr16:69284048\|69284244
ORF Type	ORF4
Protein Length	55
Nucleotide Length	168
Protein Sequence	MAPDVDPPPLDLTLHLLPGQALDRALRCISSGWRHIGICHPGPGYLFRVAMLLLS
Nucleotide Sequence	CTGGCTCCGGATGTCGATCCCCCTCCCTTGGATCTGACCTTACATTTGCTACCAGGACAGGCTCTCGACAGGGCATTGAGATGCATCTCTTCAGGGTGGAGACACATCGGGATCTGTCATCCTGGACCAGGATACTTGTTCAGGGTTGCCATGCTGCTGCTGAGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr16:69284048\|69284244	NOP56	0	0	1
chr16:69284048\|69284244	MOV10	2	2	2
chr16:69284048\|69284244	ELAVL1	5	6	4
chr16:69284048\|69284244	SF3B4	1	5	0
chr16:69284048\|69284244	YTHDF3	0	1	0
chr16:69284048\|69284244	PRPF8	0	6	3
chr16:69284048\|69284244	YTHDF1	0	2	0
chr16:69284048\|69284244	ZNF622	0	5	0
chr16:69284048\|69284244	TAF15	1	0	0
chr16:69284048\|69284244	CAPRIN1	0	1	0
chr16:69284048\|69284244	FMR1	0	2	4
chr16:69284048\|69284244	CPSF6	2	7	0
chr16:69284048\|69284244	NUDT21	1	3	0
chr16:69284048\|69284244	RBM15B	0	4	0
chr16:69284048\|69284244	CPSF1	1	0	0
chr16:69284048\|69284244	FUS	0	1	0
chr16:69284048\|69284244	EIF3H	0	1	0
chr16:69284048\|69284244	SRSF7	0	0	1
chr16:69284048\|69284244	SRSF1	1	1	4
chr16:69284048\|69284244	NOP58	0	0	1
chr16:69284048\|69284244	SRSF3	1	0	0
chr16:69284048\|69284244	IGF2BP1	0	2	0
chr16:69284048\|69284244	U2AF1	2	0	0
chr16:69284048\|69284244	EIF3A	1	0	0
chr16:69284048\|69284244	EIF3B	0	1	0
chr16:69284048\|69284244	U2AF2	12	1	1
chr16:69284048\|69284244	SRSF9	0	0	2
chr16:69284048\|69284244	DDX54	1	0	7
chr16:69284048\|69284244	EFTUD2	1	1	0
chr16:69284048\|69284244	GRWD1	0	5	0
chr16:69284048\|69284244	RBM15	0	1	0
chr16:69284048\|69284244	FIP1L1	2	0	0
chr16:69284048\|69284244	PTBP1	2	4	0
chr16:69284048\|69284244	HNRNPC	33	26	1
chr16:69284048\|69284244	ZNF184	0	0	1
chr16:69284048\|69284244	DDX3X	0	13	0
chr16:69284048\|69284244	EIF3D	0	2	0
chr16:69284048\|69284244	YTHDC1	0	4	0
chr16:69284048\|69284244	SMNDC1	1	0	0
chr16:69284048\|69284244	MSI1	0	1	0
chr16:69284048\|69284244	LIN28B	1	7	1
chr16:69284048\|69284244	LIN28A	1	1	0
chr16:69284048\|69284244	FXR2	0	1	0
chr16:69284048\|69284244	UCHL5	0	1	0
chr16:69284048\|69284244	IGF2BP2	0	1	3
chr16:69284048\|69284244	STAU1	2	0	0
chr16:69284048\|69284244	BUD13	2	4	2
chr16:69284048\|69284244	YTHDF2	0	2	0
chr16:69284048\|69284244	RTCB	0	1	0
chr16:69284048\|69284244	DDX24	0	1	0
chr16:69284048\|69284244	CSTF2T	1	1	1
chr16:69284048\|69284244	SRRM4	0	1	0
chr16:69284048\|69284244	CPSF7	0	1	0
chr16:69284048\|69284244	YBX3	0	1	0
chr16:69284048\|69284244	PPIG	0	3	0
chr16:69284048\|69284244	FBL	0	1	1
chr16:69284048\|69284244	ATXN2	0	1	0
chr16:69284048\|69284244	EWSR1	0	1	0
chr16:69284048\|69284244	EIF4A3	1	2	2
chr16:69284048\|69284244	AGO2	0	0	2

CircRNA Information