CircRNA Information

General Information
circRNA Basic Information
CircID chr16:69324246|69324486
Strand -
CircType exon
Host Gene ENSG00000132612.15;
Algorism CIRI2;
Sequence GGTGAATGCAGACGACCTCCTGAAAGTGAAGAAATTCTCAGAGGACTTTGGGCAAGAGAGTTAAAAGCTGCTTCACTTGGGCAATGGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTTCCCTCTGCTGTCTGGCCGTCTGCCAGGGAGCCAGAAGGAAGGGCCTTGCAGCCACAGAGACA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:69324246|69324486 hsa-miR-197-5p 0 0 1
chr16:69324246|69324486 hsa-miR-197-3p 0 0 1
chr16:69324246|69324486 hsa-miR-149-5p 0 0 1
chr16:69324246|69324486 hsa-miR-149-3p 0 0 1
chr16:69324246|69324486 hsa-miR-412-5p 0 0 1
chr16:69324246|69324486 hsa-miR-412-3p 0 0 1
chr16:69324246|69324486 hsa-miR-489-5p 0 0 1
chr16:69324246|69324486 hsa-miR-489-3p 0 0 1
chr16:69324246|69324486 hsa-miR-519e-5p 0 0 1
chr16:69324246|69324486 hsa-miR-519e-3p 0 0 1
chr16:69324246|69324486 hsa-miR-580-5p 0 0 1
chr16:69324246|69324486 hsa-miR-580-3p 0 0 1
chr16:69324246|69324486 hsa-miR-593-5p 0 0 1
chr16:69324246|69324486 hsa-miR-593-3p 0 0 1
chr16:69324246|69324486 hsa-miR-604 0 0 1
chr16:69324246|69324486 hsa-miR-618 1 0 1
chr16:69324246|69324486 hsa-miR-646 0 0 1
chr16:69324246|69324486 hsa-miR-647 0 1 1
chr16:69324246|69324486 hsa-miR-661 0 0 1
chr16:69324246|69324486 hsa-miR-922 0 0 1
chr16:69324246|69324486 hsa-miR-939-5p 0 0 1
chr16:69324246|69324486 hsa-miR-939-3p 0 0 1
chr16:69324246|69324486 hsa-miR-943 0 0 1
chr16:69324246|69324486 hsa-miR-1231 0 0 1
chr16:69324246|69324486 hsa-miR-1237-5p 0 0 1
chr16:69324246|69324486 hsa-miR-1237-3p 0 0 1
chr16:69324246|69324486 hsa-miR-1290 0 0 1
chr16:69324246|69324486 hsa-miR-1248 0 0 1
chr16:69324246|69324486 hsa-miR-1267 0 0 1
chr16:69324246|69324486 hsa-miR-1324 0 0 1
chr16:69324246|69324486 hsa-miR-532-3p 1 0 1
chr16:69324246|69324486 hsa-miR-146b-3p 0 0 1
chr16:69324246|69324486 hsa-miR-339-5p 0 0 1
chr16:69324246|69324486 hsa-miR-1224-3p 0 0 1
chr16:69324246|69324486 hsa-miR-515-3p 0 1 1
chr16:69324246|69324486 hsa-miR-1302 0 0 1
chr16:69324246|69324486 hsa-miR-876-5p 0 0 1
chr16:69324246|69324486 hsa-miR-1260 0 0 1
chr16:69324246|69324486 hsa-miR-1280 0 0 1
chr16:69324246|69324486 hsa-miR-1233 0 0 1
chr16:69324246|69324486 hsa-miR-550 0 0 1
chr16:69324246|69324486 hsa-miR-1254 0 0 1
chr16:69324246|69324486 hsa-miR-1260a 0 1 0
chr16:69324246|69324486 hsa-miR-1260b 0 1 0
chr16:69324246|69324486 hsa-miR-4298 0 1 0
chr16:69324246|69324486 hsa-miR-4308 0 1 0
chr16:69324246|69324486 hsa-miR-4493 0 1 0
chr16:69324246|69324486 hsa-miR-378j 0 1 0
chr16:69324246|69324486 hsa-miR-3150a-3p 0 1 0
chr16:69324246|69324486 hsa-miR-4687-3p 0 1 0
chr16:69324246|69324486 hsa-miR-1233-3p 0 1 0
chr16:69324246|69324486 hsa-miR-6873-5p 0 1 0
chr16:69324246|69324486 hsa-miR-3064-5p 0 1 0
chr16:69324246|69324486 hsa-miR-4474-3p 0 1 0
chr16:69324246|69324486 hsa-miR-6868-3p 0 1 0
chr16:69324246|69324486 hsa-miR-1909-5p 0 1 0
chr16:69324246|69324486 hsa-miR-3667-3p 0 1 0
chr16:69324246|69324486 hsa-miR-6780a-3p 0 1 0
chr16:69324246|69324486 hsa-miR-4708-3p 0 1 0
chr16:69324246|69324486 hsa-miR-6801-5p 0 1 0
chr16:69324246|69324486 hsa-miR-6868-5p 0 1 0
chr16:69324246|69324486 hsa-miR-6886-3p 0 1 0
chr16:69324246|69324486 hsa-miR-5088-3p 0 1 0
chr16:69324246|69324486 hsa-miR-6851-3p 0 1 0
chr16:69324246|69324486 hsa-miR-6779-3p 0 1 0
chr16:69324246|69324486 hsa-miR-431-3p 0 1 0
chr16:69324246|69324486 hsa-miR-221-5p 0 1 0
chr16:69324246|69324486 hsa-miR-6763-5p 0 1 0
chr16:69324246|69324486 hsa-miR-186-3p 0 1 0
chr16:69324246|69324486 hsa-miR-6836-5p 1 0 0
chr16:69324246|69324486 hsa-miR-1271-3p 0 1 0
chr16:69324246|69324486 hsa-miR-6750-5p 0 1 0
chr16:69324246|69324486 hsa-miR-3085-3p 0 1 0
chr16:69324246|69324486 hsa-miR-6504-5p 0 1 0
chr16:69324246|69324486 hsa-miR-5699-3p 0 1 0
chr16:69324246|69324486 hsa-miR-4653-5p 0 1 0
chr16:69324246|69324486 hsa-miR-6507-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:69324246|69324486
ORF Type ORF1
Protein Length 58
Nucleotide Length 174
Protein Sequence MLHLGNGEGGRLIGANPGTPHVNSQTGLQGLSQSIQSSLCCLAVCQGARRKGLAATET
Nucleotide Sequence CTGCTTCACTTGGGCAATGGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTTCCCTCTGCTGTCTGGCCGTCTGCCAGGGAGCCAGAAGGAAGGGCCTTGCAGCCACAGAGACA
CircID chr16:69324246|69324486
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MGQIQALPMSTARQGSRACPSQYRVPSAVWPSAREPEGRALQPQR
Nucleotide Sequence TTGGGGCAAATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTTCCCTCTGCTGTCTGGCCGTCTGCCAGGGAGCCAGAAGGAAGGGCCTTGCAGCCACAGAGA
CircID chr16:69324246|69324486
ORF Type ORF3
Protein Length 42
Nucleotide Length 129
Protein Sequence MGQALEPCLAVDMGSAWICPNQPPTFTIAQVKQLLTLLPKVL
Nucleotide Sequence CTGGGACAAGCCCTGGAGCCCTGTCTGGCTGTTGACATGGGGAGTGCCTGGATTTGCCCCAATCAACCTCCCACCTTCACCATTGCCCAAGTGAAGCAGCTTTTAACTCTCTTGCCCAAAGTCCTCTGA
CircID chr16:69324246|69324486
ORF Type ORF4
Protein Length 46
Nucleotide Length 141
Protein Sequence MAPWQTARQQRELCIDWDKPWSPVWLLTWGVPGFAPINLPPSPLPK
Nucleotide Sequence CTGGCTCCCTGGCAGACGGCCAGACAGCAGAGGGAACTCTGTATTGACTGGGACAAGCCCTGGAGCCCTGTCTGGCTGTTGACATGGGGAGTGCCTGGATTTGCCCCAATCAACCTCCCACCTTCACCATTGCCCAAGTGA
CircID chr16:69324246|69324486
ORF Type ORF5
Protein Length 34
Nucleotide Length 105
Protein Sequence MWLQGPSFWLPGRRPDSRGNSVLTGTSPGALSGC
Nucleotide Sequence CTGTGGCTGCAAGGCCCTTCCTTCTGGCTCCCTGGCAGACGGCCAGACAGCAGAGGGAACTCTGTATTGACTGGGACAAGCCCTGGAGCCCTGTCTGGCTGTTGA
CircID chr16:69324246|69324486
ORF Type ORF6
Protein Length 39
Nucleotide Length 117
Protein Sequence MDLPQSTSHLHHCPSEAAFNSLAQSPLRISSLSGGRLHS
Nucleotide Sequence CTGGATTTGCCCCAATCAACCTCCCACCTTCACCATTGCCCAAGTGAAGCAGCTTTTAACTCTCTTGCCCAAAGTCCTCTGAGAATTTCTTCACTTTCAGGAGGTCGTCTGCATTCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab