CircRNA Information

General Information
circRNA Basic Information
CircID chr16:69342747|69342926
Strand -
CircType exon
Host Gene ENSG00000132603.12;
Algorism CIRI2;
Sequence AAGCTGTTTTCTCAGTATTTTTCTTGGATGGGATGACGCTAGGCTGGAAAGTTTTTTTCATCACTATGATTTTATAAAACAATTTTTTCTATGAACCTTTACTTACTTGACTGGATTGGACTAAAAGCACTGATCAGAGGCCACGACATAAAAATTCAGTCCCTTTGTCCTTCCCCGTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:69342747|69342926 hsa-miR-26b-5p 0 0 1
chr16:69342747|69342926 hsa-miR-26b-3p 0 0 1
chr16:69342747|69342926 hsa-miR-148a-5p 0 0 1
chr16:69342747|69342926 hsa-miR-148a-3p 0 0 1
chr16:69342747|69342926 hsa-miR-200b-5p 0 0 1
chr16:69342747|69342926 hsa-miR-200b-3p 0 0 1
chr16:69342747|69342926 hsa-miR-152-5p 0 0 1
chr16:69342747|69342926 hsa-miR-152-3p 0 0 1
chr16:69342747|69342926 hsa-miR-200c-5p 0 0 1
chr16:69342747|69342926 hsa-miR-200c-3p 0 0 1
chr16:69342747|69342926 hsa-miR-383-5p 0 0 1
chr16:69342747|69342926 hsa-miR-383-3p 0 0 1
chr16:69342747|69342926 hsa-miR-340-5p 0 0 1
chr16:69342747|69342926 hsa-miR-340-3p 0 0 1
chr16:69342747|69342926 hsa-miR-148b-5p 0 0 1
chr16:69342747|69342926 hsa-miR-148b-3p 0 0 1
chr16:69342747|69342926 hsa-miR-429 0 0 1
chr16:69342747|69342926 hsa-miR-376b-5p 0 0 1
chr16:69342747|69342926 hsa-miR-376b-3p 0 0 1
chr16:69342747|69342926 hsa-miR-520f-5p 0 0 1
chr16:69342747|69342926 hsa-miR-520f-3p 0 0 1
chr16:69342747|69342926 hsa-miR-539-5p 0 0 1
chr16:69342747|69342926 hsa-miR-539-3p 0 0 1
chr16:69342747|69342926 hsa-miR-570-5p 0 0 1
chr16:69342747|69342926 hsa-miR-570-3p 0 0 1
chr16:69342747|69342926 hsa-miR-1204 1 0 1
chr16:69342747|69342926 hsa-miR-1297 0 0 1
chr16:69342747|69342926 hsa-miR-548m 0 0 1
chr16:69342747|69342926 hsa-miR-26a 0 0 1
chr16:69342747|69342926 hsa-miR-376a 0 0 1
chr16:69342747|69342926 hsa-miR-1245 0 0 1
chr16:69342747|69342926 hsa-miR-4271 0 1 0
chr16:69342747|69342926 hsa-miR-4476 1 1 0
chr16:69342747|69342926 hsa-miR-4706 1 0 0
chr16:69342747|69342926 hsa-miR-4739 1 0 0
chr16:69342747|69342926 hsa-miR-5695 0 1 0
chr16:69342747|69342926 hsa-miR-6890-5p 1 0 0
chr16:69342747|69342926 hsa-miR-4655-5p 1 0 0
chr16:69342747|69342926 hsa-miR-6849-3p 1 1 0
chr16:69342747|69342926 hsa-miR-7845-5p 1 0 0
chr16:69342747|69342926 hsa-miR-7108-5p 1 0 0
chr16:69342747|69342926 hsa-miR-185-3p 1 0 0
chr16:69342747|69342926 hsa-miR-6798-5p 1 0 0
chr16:69342747|69342926 hsa-miR-204-3p 1 1 0
chr16:69342747|69342926 hsa-miR-3677-3p 1 0 0
chr16:69342747|69342926 hsa-miR-6834-5p 1 0 0
chr16:69342747|69342926 hsa-miR-149-3p 1 1 0
chr16:69342747|69342926 hsa-miR-6813-5p 0 1 0
chr16:69342747|69342926 hsa-miR-6779-5p 1 0 0
chr16:69342747|69342926 hsa-miR-6797-5p 1 0 0
chr16:69342747|69342926 hsa-miR-7111-5p 1 0 0
chr16:69342747|69342926 hsa-miR-5196-5p 1 1 0
chr16:69342747|69342926 hsa-miR-6780b-5p 0 1 0
chr16:69342747|69342926 hsa-miR-4747-5p 0 1 0
chr16:69342747|69342926 hsa-miR-6785-5p 1 0 0
chr16:69342747|69342926 hsa-miR-2682-3p 1 0 0
chr16:69342747|69342926 hsa-miR-4757-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:69342747|69342926
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MNLYLLDWIGLKALIRGHDIKIQSLCPSPC
Nucleotide Sequence ATGAACCTTTACTTACTTGACTGGATTGGACTAAAAGCACTGATCAGAGGCCACGACATAAAAATTCAGTCCCTTTGTCCTTCCCCGTGC
CircID chr16:69342747|69342926
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MFYKIIVMKKTFQPSVIPSKKNTEKTA
Nucleotide Sequence TTGTTTTATAAAATCATAGTGATGAAAAAAACTTTCCAGCCTAGCGTCATCCCATCCAAGAAAAATACTGAGAAAACAGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab