CircRNA Information

General Information
circRNA Basic Information
CircID chr16:69743005|69743270
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGGTATTATACTGTAAAGAAGAACTTTCCTTTTAGTCTCATTTATTGATTTCTATGAGTGTGGTCTTGTGGATTTCTGTCATAGTCTACAGGTTGTGATCTATCACTGTCATTTTGAGCCTCGCGTTGTGCCATGTGTGGCCAGTGGGAGCCTGTGTTCTTTTGACAGATCCTGGTCTGTCAAACTTTATGGCACAACAAGAAGTTCCCAGAGACTCAGCCATCTCCTGCCTGTGCCCCAGAATCCGCCATTTCTCTCAGGAGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:69743005|69743270 hsa-miR-183-5p 0 0 1
chr16:69743005|69743270 hsa-miR-183-3p 0 0 1
chr16:69743005|69743270 hsa-miR-144-5p 0 0 1
chr16:69743005|69743270 hsa-miR-144-3p 0 0 1
chr16:69743005|69743270 hsa-miR-374a-5p 0 0 1
chr16:69743005|69743270 hsa-miR-374a-3p 0 0 1
chr16:69743005|69743270 hsa-miR-326 0 1 1
chr16:69743005|69743270 hsa-miR-425-5p 0 0 1
chr16:69743005|69743270 hsa-miR-425-3p 0 0 1
chr16:69743005|69743270 hsa-miR-376b-5p 0 0 1
chr16:69743005|69743270 hsa-miR-376b-3p 0 0 1
chr16:69743005|69743270 hsa-miR-484 0 0 1
chr16:69743005|69743270 hsa-miR-193b-5p 0 0 1
chr16:69743005|69743270 hsa-miR-193b-3p 0 0 1
chr16:69743005|69743270 hsa-miR-539-5p 0 0 1
chr16:69743005|69743270 hsa-miR-539-3p 0 0 1
chr16:69743005|69743270 hsa-miR-561-5p 0 0 1
chr16:69743005|69743270 hsa-miR-561-3p 0 0 1
chr16:69743005|69743270 hsa-miR-578 0 0 1
chr16:69743005|69743270 hsa-miR-588 0 1 1
chr16:69743005|69743270 hsa-miR-593-5p 0 0 1
chr16:69743005|69743270 hsa-miR-593-3p 0 0 1
chr16:69743005|69743270 hsa-miR-627-5p 0 0 1
chr16:69743005|69743270 hsa-miR-627-3p 0 0 1
chr16:69743005|69743270 hsa-miR-637 1 0 1
chr16:69743005|69743270 hsa-miR-649 0 0 1
chr16:69743005|69743270 hsa-miR-374b-5p 0 0 1
chr16:69743005|69743270 hsa-miR-374b-3p 0 0 1
chr16:69743005|69743270 hsa-miR-924 0 0 1
chr16:69743005|69743270 hsa-miR-940 0 0 1
chr16:69743005|69743270 hsa-miR-1227-5p 0 0 1
chr16:69743005|69743270 hsa-miR-1227-3p 0 0 1
chr16:69743005|69743270 hsa-miR-1200 0 0 1
chr16:69743005|69743270 hsa-miR-1292-5p 0 0 1
chr16:69743005|69743270 hsa-miR-1292-3p 0 0 1
chr16:69743005|69743270 hsa-miR-486-3p 0 0 1
chr16:69743005|69743270 hsa-miR-532-3p 0 0 1
chr16:69743005|69743270 hsa-miR-142-5p 0 0 1
chr16:69743005|69743270 hsa-miR-582-5p 0 0 1
chr16:69743005|69743270 hsa-miR-330-5p 0 0 1
chr16:69743005|69743270 hsa-miR-193a-3p 0 0 1
chr16:69743005|69743270 hsa-miR-369-3p 0 0 1
chr16:69743005|69743270 hsa-miR-514 0 0 1
chr16:69743005|69743270 hsa-miR-376a 0 0 1
chr16:69743005|69743270 hsa-miR-101 0 0 1
chr16:69743005|69743270 hsa-miR-661 1 0 0
chr16:69743005|69743270 hsa-miR-760 1 0 0
chr16:69743005|69743270 hsa-miR-3155a 0 1 0
chr16:69743005|69743270 hsa-miR-3197 1 0 0
chr16:69743005|69743270 hsa-miR-4260 1 0 0
chr16:69743005|69743270 hsa-miR-3916 1 0 0
chr16:69743005|69743270 hsa-miR-3945 1 1 0
chr16:69743005|69743270 hsa-miR-3155b 0 1 0
chr16:69743005|69743270 hsa-miR-4499 1 0 0
chr16:69743005|69743270 hsa-miR-4505 1 0 0
chr16:69743005|69743270 hsa-miR-4514 1 1 0
chr16:69743005|69743270 hsa-miR-4673 1 1 0
chr16:69743005|69743270 hsa-miR-5093 1 0 0
chr16:69743005|69743270 hsa-miR-5680 0 1 0
chr16:69743005|69743270 hsa-miR-6088 1 0 0
chr16:69743005|69743270 hsa-miR-8089 1 0 0
chr16:69743005|69743270 hsa-miR-12120 1 0 0
chr16:69743005|69743270 hsa-miR-103a-2-5p 1 1 0
chr16:69743005|69743270 hsa-miR-150-3p 1 0 0
chr16:69743005|69743270 hsa-miR-4726-3p 1 0 0
chr16:69743005|69743270 hsa-miR-25-5p 1 0 0
chr16:69743005|69743270 hsa-miR-3622a-5p 1 0 0
chr16:69743005|69743270 hsa-miR-6746-5p 1 0 0
chr16:69743005|69743270 hsa-miR-4722-5p 1 1 0
chr16:69743005|69743270 hsa-miR-7160-5p 1 0 0
chr16:69743005|69743270 hsa-miR-6890-5p 1 0 0
chr16:69743005|69743270 hsa-miR-6727-5p 1 0 0
chr16:69743005|69743270 hsa-miR-6721-5p 1 0 0
chr16:69743005|69743270 hsa-miR-197-5p 1 0 0
chr16:69743005|69743270 hsa-miR-3151-5p 1 0 0
chr16:69743005|69743270 hsa-miR-3180-3p 1 0 0
chr16:69743005|69743270 hsa-miR-6760-5p 1 0 0
chr16:69743005|69743270 hsa-miR-2467-3p 1 0 0
chr16:69743005|69743270 hsa-miR-1288-5p 0 1 0
chr16:69743005|69743270 hsa-miR-551b-5p 0 1 0
chr16:69743005|69743270 hsa-miR-3140-3p 1 0 0
chr16:69743005|69743270 hsa-miR-6761-5p 0 1 0
chr16:69743005|69743270 hsa-miR-942-3p 0 1 0
chr16:69743005|69743270 hsa-miR-1207-5p 1 0 0
chr16:69743005|69743270 hsa-miR-4763-3p 1 0 0
chr16:69743005|69743270 hsa-miR-6865-5p 1 0 0
chr16:69743005|69743270 hsa-miR-6893-5p 0 1 0
chr16:69743005|69743270 hsa-miR-6775-5p 0 1 0
chr16:69743005|69743270 hsa-miR-6743-5p 1 0 0
chr16:69743005|69743270 hsa-miR-6797-5p 1 0 0
chr16:69743005|69743270 hsa-miR-6808-5p 0 1 0
chr16:69743005|69743270 hsa-miR-6879-5p 1 0 0
chr16:69743005|69743270 hsa-miR-10396b-5p 1 0 0
chr16:69743005|69743270 hsa-miR-328-5p 1 0 0
chr16:69743005|69743270 hsa-miR-4697-5p 1 0 0
chr16:69743005|69743270 hsa-miR-4665-5p 1 0 0
chr16:69743005|69743270 hsa-miR-4667-5p 1 0 0
chr16:69743005|69743270 hsa-miR-103a-1-5p 1 1 0
chr16:69743005|69743270 hsa-miR-450a-1-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:69743005|69743270
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence MSLALCHVWPVGACVLLTDPGLSNFMAQQEVPRDSAISCLCPRIRHFSQE
Nucleotide Sequence TTGAGCCTCGCGTTGTGCCATGTGTGGCCAGTGGGAGCCTGTGTTCTTTTGACAGATCCTGGTCTGTCAAACTTTATGGCACAACAAGAAGTTCCCAGAGACTCAGCCATCTCCTGCCTGTGCCCCAGAATCCGCCATTTCTCTCAGGAG

CircID chr16:69743005|69743270
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MVCQTLWHNKKFPETQPSPACAPESAISLRS
Nucleotide Sequence CTGGTCTGTCAAACTTTATGGCACAACAAGAAGTTCCCAGAGACTCAGCCATCTCCTGCCTGTGCCCCAGAATCCGCCATTTCTCTCAGGAGC

CircID chr16:69743005|69743270
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MCSFDRSWSVKLYGTTRSSQRLSHLLPVPQNPPFLSGA
Nucleotide Sequence CTGTGTTCTTTTGACAGATCCTGGTCTGTCAAACTTTATGGCACAACAAGAAGTTCCCAGAGACTCAGCCATCTCCTGCCTGTGCCCCAGAATCCGCCATTTCTCTCAGGAGCT

CircID chr16:69743005|69743270
ORF Type ORF4
Protein Length 51
Nucleotide Length 156
Protein Sequence MGHRQEMAESLGTSCCAIKFDRPGSVKRTQAPTGHTWHNARLKMTVIDHNL
Nucleotide Sequence CTGGGGCACAGGCAGGAGATGGCTGAGTCTCTGGGAACTTCTTGTTGTGCCATAAAGTTTGACAGACCAGGATCTGTCAAAAGAACACAGGCTCCCACTGGCCACACATGGCACAACGCGAGGCTCAAAATGACAGTGATAGATCACAACCTGTAG

CircID chr16:69743005|69743270
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MAQREAQNDSDRSQPVDYDRNPQDHTHRNQ
Nucleotide Sequence ATGGCACAACGCGAGGCTCAAAATGACAGTGATAGATCACAACCTGTAGACTATGACAGAAATCCACAAGACCACACTCATAGAAATCAATAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites