CircRNA Information

General Information
circRNA Basic Information
CircID chr16:70252586|70252854
Strand -
CircType exon
Host Gene ENSG00000090861.14;
Algorism CIRI2;
Sequence TGCTCCCAAGTGTGTTCCAGTTACTGCTGGGTTAGGAGGGGCTCTTTAAAGGTCCCAAGATTCAAATGTTCTTGTAGCAGATGAAGAGCTCTTGGCTGGACGGATGGATCCAGTGGGAGCCTCCTCCTTCCCCACTCAGTTCTTTACATCCCCGAGGCGCAGCTGGGCGAAGGAAGTGGCCAGCTGCAGCGCCTCCTGCAGGCAGCCAACGTTCTTGCCTGTGGCCTGTGCAGACACATCCTTGCCACCACCTTTACCGTCCATCAAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:70252586|70252854 hsa-miR-31-5p 0 0 1
chr16:70252586|70252854 hsa-miR-31-3p 0 0 1
chr16:70252586|70252854 hsa-miR-221-5p 0 0 1
chr16:70252586|70252854 hsa-miR-221-3p 0 0 1
chr16:70252586|70252854 hsa-miR-222-5p 0 0 1
chr16:70252586|70252854 hsa-miR-222-3p 0 0 1
chr16:70252586|70252854 hsa-miR-184 0 0 1
chr16:70252586|70252854 hsa-miR-186-5p 0 0 1
chr16:70252586|70252854 hsa-miR-186-3p 0 0 1
chr16:70252586|70252854 hsa-miR-335-5p 0 0 1
chr16:70252586|70252854 hsa-miR-335-3p 0 0 1
chr16:70252586|70252854 hsa-miR-346 0 0 1
chr16:70252586|70252854 hsa-miR-583 0 0 1
chr16:70252586|70252854 hsa-miR-588 0 0 1
chr16:70252586|70252854 hsa-miR-603 0 0 1
chr16:70252586|70252854 hsa-miR-604 0 0 1
chr16:70252586|70252854 hsa-miR-632 0 0 1
chr16:70252586|70252854 hsa-miR-635 0 0 1
chr16:70252586|70252854 hsa-miR-647 0 0 1
chr16:70252586|70252854 hsa-miR-1301-5p 0 0 1
chr16:70252586|70252854 hsa-miR-1301-3p 0 0 1
chr16:70252586|70252854 hsa-miR-765 0 0 1
chr16:70252586|70252854 hsa-miR-920 0 0 1
chr16:70252586|70252854 hsa-miR-1205 0 0 1
chr16:70252586|70252854 hsa-miR-1286 0 0 1
chr16:70252586|70252854 hsa-miR-1243 0 0 1
chr16:70252586|70252854 hsa-miR-548m 0 0 1
chr16:70252586|70252854 hsa-miR-1265 0 0 1
chr16:70252586|70252854 hsa-miR-1276 0 0 1
chr16:70252586|70252854 hsa-miR-1306-5p 0 0 1
chr16:70252586|70252854 hsa-miR-1306-3p 0 0 1
chr16:70252586|70252854 hsa-miR-1225-3p 0 0 1
chr16:70252586|70252854 hsa-miR-491-5p 0 0 1
chr16:70252586|70252854 hsa-miR-532-3p 0 0 1
chr16:70252586|70252854 hsa-miR-542-5p 0 0 1
chr16:70252586|70252854 hsa-miR-1184 0 0 1
chr16:70252586|70252854 hsa-miR-1207-3p 0 0 1
chr16:70252586|70252854 hsa-miR-1302 0 0 1
chr16:70252586|70252854 hsa-miR-582-3p 0 0 1
chr16:70252586|70252854 hsa-miR-206 1 0 0
chr16:70252586|70252854 hsa-miR-602 1 0 0
chr16:70252586|70252854 hsa-miR-4450 1 0 0
chr16:70252586|70252854 hsa-miR-4739 1 0 0
chr16:70252586|70252854 hsa-miR-4741 1 0 0
chr16:70252586|70252854 hsa-miR-6133 1 0 0
chr16:70252586|70252854 hsa-miR-6747-5p 1 0 0
chr16:70252586|70252854 hsa-miR-8071 1 0 0
chr16:70252586|70252854 hsa-miR-5187-5p 1 0 0
chr16:70252586|70252854 hsa-miR-6757-5p 1 0 0
chr16:70252586|70252854 hsa-miR-4722-5p 1 0 0
chr16:70252586|70252854 hsa-miR-8069 1 0 0
chr16:70252586|70252854 hsa-miR-6772-5p 1 0 0
chr16:70252586|70252854 hsa-miR-656-5p 1 0 0
chr16:70252586|70252854 hsa-miR-6786-5p 1 0 0
chr16:70252586|70252854 hsa-miR-1228-5p 1 0 0
chr16:70252586|70252854 hsa-miR-4787-5p 1 0 0
chr16:70252586|70252854 hsa-miR-149-3p 1 0 0
chr16:70252586|70252854 hsa-miR-4804-5p 1 0 0
chr16:70252586|70252854 hsa-miR-6801-5p 1 0 0
chr16:70252586|70252854 hsa-miR-668-5p 1 0 0
chr16:70252586|70252854 hsa-let-7g-3p 1 0 0
chr16:70252586|70252854 hsa-miR-4763-3p 1 0 0
chr16:70252586|70252854 hsa-miR-6778-5p 1 0 0
chr16:70252586|70252854 hsa-miR-6752-5p 1 0 0
chr16:70252586|70252854 hsa-miR-6756-5p 1 0 0
chr16:70252586|70252854 hsa-miR-7110-5p 1 0 0
chr16:70252586|70252854 hsa-miR-1249-5p 1 0 0
chr16:70252586|70252854 hsa-miR-6808-5p 1 0 0
chr16:70252586|70252854 hsa-miR-7111-5p 1 0 0
chr16:70252586|70252854 hsa-miR-4728-5p 1 0 0
chr16:70252586|70252854 hsa-miR-4649-5p 1 0 0
chr16:70252586|70252854 hsa-miR-4726-5p 1 0 0
chr16:70252586|70252854 hsa-miR-4745-5p 1 0 0
chr16:70252586|70252854 hsa-miR-6831-5p 1 0 0
chr16:70252586|70252854 hsa-miR-4747-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:70252586|70252854
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MGEGSGQLQRLLQAANVLACGLCRHILATTFTVHQ
Nucleotide Sequence CTGGGCGAAGGAAGTGGCCAGCTGCAGCGCCTCCTGCAGGCAGCCAACGTTCTTGCCTGTGGCCTGTGCAGACACATCCTTGCCACCACCTTTACCGTCCATCAA
CircID chr16:70252586|70252854
ORF Type ORF2
Protein Length 59
Nucleotide Length 177
Protein Sequence MAGRMDPVGASSFPTQFFTSPRRSWAKEVASCSASCRQPTFLPVACADTSLPPPLPSIK
Nucleotide Sequence TTGGCTGGACGGATGGATCCAGTGGGAGCCTCCTCCTTCCCCACTCAGTTCTTTACATCCCCGAGGCGCAGCTGGGCGAAGGAAGTGGCCAGCTGCAGCGCCTCCTGCAGGCAGCCAACGTTCTTGCCTGTGGCCTGTGCAGACACATCCTTGCCACCACCTTTACCGTCCATCAAG
CircID chr16:70252586|70252854
ORF Type ORF3
Protein Length 63
Nucleotide Length 189
Protein Sequence MKSSWLDGWIQWEPPPSPLSSLHPRGAAGRRKWPAAAPPAGSQRSCLWPVQTHPCHHLYRPSS
Nucleotide Sequence ATGAAGAGCTCTTGGCTGGACGGATGGATCCAGTGGGAGCCTCCTCCTTCCCCACTCAGTTCTTTACATCCCCGAGGCGCAGCTGGGCGAAGGAAGTGGCCAGCTGCAGCGCCTCCTGCAGGCAGCCAACGTTCTTGCCTGTGGCCTGTGCAGACACATCCTTGCCACCACCTTTACCGTCCATCAAGC
CircID chr16:70252586|70252854
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MCLHRPQARTLAACRRRCSWPLPSPSCASGM
Nucleotide Sequence ATGTGTCTGCACAGGCCACAGGCAAGAACGTTGGCTGCCTGCAGGAGGCGCTGCAGCTGGCCACTTCCTTCGCCCAGCTGCGCCTCGGGGATGTAA
CircID chr16:70252586|70252854
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MDPSVQPRALHLLQEHLNLGTFKEPLLTQQ
Nucleotide Sequence CTGGATCCATCCGTCCAGCCAAGAGCTCTTCATCTGCTACAAGAACATTTGAATCTTGGGACCTTTAAAGAGCCCCTCCTAACCCAGCAGTAA
CircID chr16:70252586|70252854
ORF Type ORF6
Protein Length 47
Nucleotide Length 144
Protein Sequence MPAGGAAAGHFLRPAAPRGCKELSGEGGGSHWIHPSSQELFICYKNI
Nucleotide Sequence CTGCCTGCAGGAGGCGCTGCAGCTGGCCACTTCCTTCGCCCAGCTGCGCCTCGGGGATGTAAAGAACTGAGTGGGGAAGGAGGAGGCTCCCACTGGATCCATCCGTCCAGCCAAGAGCTCTTCATCTGCTACAAGAACATTTGA
CircID chr16:70252586|70252854
ORF Type ORF7
Protein Length 43
Nucleotide Length 132
Protein Sequence LMDGKGGGKDVSAQATGKNVGCLQEALQLATSFAQLRLGDVKN
Nucleotide Sequence TTGATGGACGGTAAAGGTGGTGGCAAGGATGTGTCTGCACAGGCCACAGGCAAGAACGTTGGCTGCCTGCAGGAGGCGCTGCAGCTGGCCACTTCCTTCGCCCAGCTGCGCCTCGGGGATGTAAAGAACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab