CircNet

General Information

circRNA Basic Information

CircID	chr16:70258980\|70268379
Strand	-
CircType	exon
Host Gene	ENSG00000090861.15;
Algorism	find_circ;CIRI2;CIRC
Sequence	ATATGTGTTGAGACGGATTCTCCGCCGAGCTGTCCGATACGCCCATGAAAAGCTCAATGCCAGCAGGGGCTTCTTTGCTACGTTAGTGGATGTTGTCGTCCAGTCCCTGGGAGATGCATTTCCTGAGCTGAAGAAGGACCCAGACATGGTGAAGGACATCATTAATGAAGAAGAGGTGCAGTTTCTCAAGACTCTCAGCAGAGGGCGTCGCATCCTGGACAGGAAAATTCAGAGCCTGGGAGACAGCAAGACCATTCCCGGAGACACTGCTTGGCTCCTCTATGACACCTATGGGTTTCCAGTGGATCTGACTGGACTGATTGCTGAAGAGAAGGGCCTGGTGGTAGACATGGATGGCTTTGAAGAGGAGAGGAAACTGGCCCAGAAAACAGAGTTTACAGTGAAGAATGCTCAGGTCCGAGGAGGGTATGTGCTACACATTGGAACCATCTACGGTGACCTGAAAGTGGGGGATCAGGTCTGGCTGTTTATTGATGAGCCCCGACGAAGACCCATCATGAGCAACCACACAGCTACGCACATTCTGAACTTCGCCCTGCGCTCAGTGCTTGGGGAAGCTGACCAGAAAGGCTCATTGGTTGCTCCTGACCGCCTCAGATTTGACTTTACTGCCAAGGGAGCCATGTCCACCCAACAGATCAAGAAGGCTGAAGAGATTGCTAATGAGATGATTGAGGCAGCCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:70258980\|70268379	hsa-miR-24-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:70258980\|70268379
ORF Type	ORF1
Protein Length	187
Nucleotide Length	561
Protein Sequence	MVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQKTEFTVKNAQVRGGYVLHIGTIYGDLKVGDQVWLFIDEPRRRPIMSNHTATHILNFALRSVLGEADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEMIEAAK
Nucleotide Sequence	ATGGTGAAGGACATCATTAATGAAGAAGAGGTGCAGTTTCTCAAGACTCTCAGCAGAGGGCGTCGCATCCTGGACAGGAAAATTCAGAGCCTGGGAGACAGCAAGACCATTCCCGGAGACACTGCTTGGCTCCTCTATGACACCTATGGGTTTCCAGTGGATCTGACTGGACTGATTGCTGAAGAGAAGGGCCTGGTGGTAGACATGGATGGCTTTGAAGAGGAGAGGAAACTGGCCCAGAAAACAGAGTTTACAGTGAAGAATGCTCAGGTCCGAGGAGGGTATGTGCTACACATTGGAACCATCTACGGTGACCTGAAAGTGGGGGATCAGGTCTGGCTGTTTATTGATGAGCCCCGACGAAGACCCATCATGAGCAACCACACAGCTACGCACATTCTGAACTTCGCCCTGCGCTCAGTGCTTGGGGAAGCTGACCAGAAAGGCTCATTGGTTGCTCCTGACCGCCTCAGATTTGACTTTACTGCCAAGGGAGCCATGTCCACCCAACAGATCAAGAAGGCTGAAGAGATTGCTAATGAGATGATTGAGGCAGCCAAG

CircID	chr16:70258980\|70268379
ORF Type	ORF2
Protein Length	71
Nucleotide Length	213
Protein Sequence	MRRPLLRVLRNCTSSSLMMSFTMSGSFFSSGNASPRDWTTTSTNVAKKPLLALSFSWAYRTARRRIRLNTY
Nucleotide Sequence	ATGCGACGCCCTCTGCTGAGAGTCTTGAGAAACTGCACCTCTTCTTCATTAATGATGTCCTTCACCATGTCTGGGTCCTTCTTCAGCTCAGGAAATGCATCTCCCAGGGACTGGACGACAACATCCACTAACGTAGCAAAGAAGCCCCTGCTGGCATTGAGCTTTTCATGGGCGTATCGGACAGCTCGGCGGAGAATCCGTCTCAACACATAT

CircID	chr16:70258980\|70268379
ORF Type	ORF3
Protein Length	117
Nucleotide Length	351
Protein Sequence	HIPSSDLSILHCKLCFLGQFPLLFKAIHVYHQALLFSNQSSQIHWKPIGVIEEPSSVSGNGLAVSQALNFPVQDATPSAESLEKLHLFFINDVLHHVWVLLQLRKCISQGLDDNIH*
Nucleotide Sequence	CACATACCCTCCTCGGACCTGAGCATTCTTCACTGTAAACTCTGTTTTCTGGGCCAGTTTCCTCTCCTCTTCAAAGCCATCCATGTCTACCACCAGGCCCTTCTCTTCAGCAATCAGTCCAGTCAGATCCACTGGAAACCCATAGGTGTCATAGAGGAGCCAAGCAGTGTCTCCGGGAATGGTCTTGCTGTCTCCCAGGCTCTGAATTTTCCTGTCCAGGATGCGACGCCCTCTGCTGAGAGTCTTGAGAAACTGCACCTCTTCTTCATTAATGATGTCCTTCACCATGTCTGGGTCCTTCTTCAGCTCAGGAAATGCATCTCCCAGGGACTGGACGACAACATCCACTAA

CircID	chr16:70258980\|70268379
ORF Type	ORF4
Protein Length	57
Nucleotide Length	171
Protein Sequence	MAPLAVKSNLRRSGATNEPFWSASPSTERRAKFRMCVAVWLLMMGLRRGSSINSQT*
Nucleotide Sequence	ATGGCTCCCTTGGCAGTAAAGTCAAATCTGAGGCGGTCAGGAGCAACCAATGAGCCTTTCTGGTCAGCTTCCCCAAGCACTGAGCGCAGGGCGAAGTTCAGAATGTGCGTAGCTGTGTGGTTGCTCATGATGGGTCTTCGTCGGGGCTCATCAATAAACAGCCAGACCTGA

CircID	chr16:70258980\|70268379
ORF Type	ORF5
Protein Length	49
Nucleotide Length	147
Protein Sequence	MKKRCSFSRLSAEGVASWTGKFRAWETARPFPETLLGSSMTPMGFQWI*
Nucleotide Sequence	ATGAAGAAGAGGTGCAGTTTCTCAAGACTCTCAGCAGAGGGCGTCGCATCCTGGACAGGAAAATTCAGAGCCTGGGAGACAGCAAGACCATTCCCGGAGACACTGCTTGGCTCCTCTATGACACCTATGGGTTTCCAGTGGATCTGA

CircID	chr16:70258980\|70268379
ORF Type	ORF6
Protein Length	67
Nucleotide Length	201
Protein Sequence	TLFSGPVSSPLQSHPCLPPGPSLQQSVQSDPLETHRCHRGAKQCLREWSCCLPGSEFSCPGCDALC*
Nucleotide Sequence	ACTCTGTTTTCTGGGCCAGTTTCCTCTCCTCTTCAAAGCCATCCATGTCTACCACCAGGCCCTTCTCTTCAGCAATCAGTCCAGTCAGATCCACTGGAAACCCATAGGTGTCATAGAGGAGCCAAGCAGTGTCTCCGGGAATGGTCTTGCTGTCTCCCAGGCTCTGAATTTTCCTGTCCAGGATGCGACGCCCTCTGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr16:70258980\|70268379	NOP56	1	0	2
chr16:70258980\|70268379	MOV10	0	1	2
chr16:70258980\|70268379	ELAVL1	7	2	7
chr16:70258980\|70268379	DHX9	0	2	4
chr16:70258980\|70268379	SF3B4	1	2	0
chr16:70258980\|70268379	FAM120A	0	4	1
chr16:70258980\|70268379	CELF2	0	2	0
chr16:70258980\|70268379	PRPF8	0	8	1
chr16:70258980\|70268379	FBL	0	2	10
chr16:70258980\|70268379	UPF1	0	0	1
chr16:70258980\|70268379	TNRC6A	0	4	2
chr16:70258980\|70268379	CAPRIN1	0	1	0
chr16:70258980\|70268379	FMR1	0	13	23
chr16:70258980\|70268379	CPSF6	0	1	2
chr16:70258980\|70268379	TROVE2	0	1	2
chr16:70258980\|70268379	FUS	0	7	1
chr16:70258980\|70268379	GNL3	0	0	1
chr16:70258980\|70268379	DGCR8	0	2	3
chr16:70258980\|70268379	SRSF7	0	2	2
chr16:70258980\|70268379	SRSF1	0	2	8
chr16:70258980\|70268379	NOP58	4	2	12
chr16:70258980\|70268379	U2AF1	0	3	1
chr16:70258980\|70268379	U2AF2	9	10	1
chr16:70258980\|70268379	SRSF9	0	2	2
chr16:70258980\|70268379	DDX54	0	9	24
chr16:70258980\|70268379	RBM10	2	6	0
chr16:70258980\|70268379	PCBP2	0	3	0
chr16:70258980\|70268379	HNRNPM	0	1	0
chr16:70258980\|70268379	MSI2	0	3	5
chr16:70258980\|70268379	PTBP1	15	1	3
chr16:70258980\|70268379	HNRNPC	18	0	0
chr16:70258980\|70268379	TRA2A	0	4	14
chr16:70258980\|70268379	HNRNPA2B1	0	1	0
chr16:70258980\|70268379	ZNF184	0	1	4
chr16:70258980\|70268379	HNRNPA1	2	2	0
chr16:70258980\|70268379	LARP7	0	2	0
chr16:70258980\|70268379	SBDS	0	1	0
chr16:70258980\|70268379	AUH	0	2	1
chr16:70258980\|70268379	ACIN1	0	3	8
chr16:70258980\|70268379	LIN28B	0	6	0
chr16:70258980\|70268379	FXR1	0	5	4
chr16:70258980\|70268379	FXR2	0	3	7
chr16:70258980\|70268379	NUMA1	0	2	0
chr16:70258980\|70268379	SND1	0	4	1
chr16:70258980\|70268379	IGF2BP1	0	0	1
chr16:70258980\|70268379	GTF2F1	0	2	0
chr16:70258980\|70268379	IGF2BP3	0	2	2
chr16:70258980\|70268379	IGF2BP2	2	7	16
chr16:70258980\|70268379	NPM1	0	2	2
chr16:70258980\|70268379	FTO	0	1	0
chr16:70258980\|70268379	TARDBP	1	1	2
chr16:70258980\|70268379	YTHDC1	0	0	1
chr16:70258980\|70268379	TAF15	0	6	0
chr16:70258980\|70268379	AIFM1	0	0	1
chr16:70258980\|70268379	BUD13	0	2	2
chr16:70258980\|70268379	RBFOX2	0	1	0
chr16:70258980\|70268379	CNBP	0	1	2
chr16:70258980\|70268379	EIF4G2	0	0	4
chr16:70258980\|70268379	RBM47	1	0	2
chr16:70258980\|70268379	CSTF2T	0	4	5
chr16:70258980\|70268379	BCCIP	0	2	1
chr16:70258980\|70268379	YWHAG	0	2	0
chr16:70258980\|70268379	SF3A3	0	1	0
chr16:70258980\|70268379	RBM22	0	2	0
chr16:70258980\|70268379	XRN2	0	1	0
chr16:70258980\|70268379	ALKBH5	0	0	1
chr16:70258980\|70268379	AGO1	0	0	1
chr16:70258980\|70268379	EIF4A3	3	7	9
chr16:70258980\|70268379	AGO2	0	2	7

CircRNA Information