CircRNA Information

General Information
circRNA Basic Information
CircID chr16:70571798|70571980
Strand -
CircType exon
Host Gene ENSG00000189091.11;
Algorism CIRI2;
Sequence CCGCTACGCCTTCTGAGCCCTCCTTTCCCGGTGGGGCTTGCCAGAGACTGTGTGTTTTGTTTCCCCCACCACCATCACTGCCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATTATGAAAGTCAACAGCTCTTTCCCCTCAGCTCTTCTCCTGGAATGACTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:70571798|70571980 hsa-miR-31-5p 0 0 1
chr16:70571798|70571980 hsa-miR-31-3p 0 0 1
chr16:70571798|70571980 hsa-miR-34a-5p 0 0 1
chr16:70571798|70571980 hsa-miR-34a-3p 0 0 1
chr16:70571798|70571980 hsa-miR-326 0 0 1
chr16:70571798|70571980 hsa-miR-449a 0 0 1
chr16:70571798|70571980 hsa-miR-593-5p 0 0 1
chr16:70571798|70571980 hsa-miR-593-3p 0 0 1
chr16:70571798|70571980 hsa-miR-625-5p 0 0 1
chr16:70571798|70571980 hsa-miR-625-3p 0 0 1
chr16:70571798|70571980 hsa-miR-449b-5p 0 0 1
chr16:70571798|70571980 hsa-miR-449b-3p 0 0 1
chr16:70571798|70571980 hsa-miR-298 0 1 1
chr16:70571798|70571980 hsa-miR-541-5p 0 0 1
chr16:70571798|70571980 hsa-miR-541-3p 0 0 1
chr16:70571798|70571980 hsa-miR-665 1 1 1
chr16:70571798|70571980 hsa-miR-944 0 0 1
chr16:70571798|70571980 hsa-miR-1253 0 0 1
chr16:70571798|70571980 hsa-miR-1267 0 0 1
chr16:70571798|70571980 hsa-miR-1275 0 0 1
chr16:70571798|70571980 hsa-miR-1276 0 0 1
chr16:70571798|70571980 hsa-miR-423-5p 1 0 1
chr16:70571798|70571980 hsa-miR-654-5p 0 0 1
chr16:70571798|70571980 hsa-miR-876-3p 0 0 1
chr16:70571798|70571980 hsa-miR-330-5p 0 0 1
chr16:70571798|70571980 hsa-miR-34c-5p 0 0 1
chr16:70571798|70571980 hsa-miR-1280 0 0 1
chr16:70571798|70571980 hsa-miR-323-5p 0 0 1
chr16:70571798|70571980 hsa-miR-24 0 0 1
chr16:70571798|70571980 hsa-miR-608 1 0 0
chr16:70571798|70571980 hsa-miR-658 1 0 0
chr16:70571798|70571980 hsa-miR-935 0 1 0
chr16:70571798|70571980 hsa-miR-3141 1 0 0
chr16:70571798|70571980 hsa-miR-3153 0 1 0
chr16:70571798|70571980 hsa-miR-3175 1 0 0
chr16:70571798|70571980 hsa-miR-4298 1 0 0
chr16:70571798|70571980 hsa-miR-4437 0 1 0
chr16:70571798|70571980 hsa-miR-4516 0 1 0
chr16:70571798|70571980 hsa-miR-4533 1 0 0
chr16:70571798|70571980 hsa-miR-4656 1 1 0
chr16:70571798|70571980 hsa-miR-4721 1 1 0
chr16:70571798|70571980 hsa-miR-4739 1 0 0
chr16:70571798|70571980 hsa-miR-5093 1 0 0
chr16:70571798|70571980 hsa-miR-6077 0 1 0
chr16:70571798|70571980 hsa-miR-6125 0 1 0
chr16:70571798|70571980 hsa-miR-8085 1 1 0
chr16:70571798|70571980 hsa-miR-6734-5p 0 1 0
chr16:70571798|70571980 hsa-miR-6879-3p 0 1 0
chr16:70571798|70571980 hsa-miR-6880-5p 1 0 0
chr16:70571798|70571980 hsa-miR-4695-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6746-5p 0 1 0
chr16:70571798|70571980 hsa-miR-4722-5p 1 0 0
chr16:70571798|70571980 hsa-miR-505-5p 0 1 0
chr16:70571798|70571980 hsa-miR-8069 1 0 0
chr16:70571798|70571980 hsa-miR-6783-5p 0 1 0
chr16:70571798|70571980 hsa-miR-6716-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6793-5p 1 0 0
chr16:70571798|70571980 hsa-miR-5088-5p 0 1 0
chr16:70571798|70571980 hsa-miR-7109-5p 1 0 0
chr16:70571798|70571980 hsa-miR-4786-3p 0 1 0
chr16:70571798|70571980 hsa-miR-3191-5p 0 1 0
chr16:70571798|70571980 hsa-miR-4717-3p 0 1 0
chr16:70571798|70571980 hsa-miR-3160-3p 0 1 0
chr16:70571798|70571980 hsa-miR-149-3p 1 0 0
chr16:70571798|70571980 hsa-miR-660-3p 0 1 0
chr16:70571798|70571980 hsa-miR-330-3p 0 1 0
chr16:70571798|70571980 hsa-miR-744-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6865-3p 0 1 0
chr16:70571798|70571980 hsa-miR-5197-3p 0 1 0
chr16:70571798|70571980 hsa-miR-181d-3p 0 1 0
chr16:70571798|70571980 hsa-miR-942-3p 0 1 0
chr16:70571798|70571980 hsa-miR-1207-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6865-5p 0 1 0
chr16:70571798|70571980 hsa-miR-6754-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6756-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6769a-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6803-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6815-5p 0 1 0
chr16:70571798|70571980 hsa-miR-1249-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6779-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6780a-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6797-5p 1 0 0
chr16:70571798|70571980 hsa-miR-7111-5p 1 0 0
chr16:70571798|70571980 hsa-miR-4728-5p 1 0 0
chr16:70571798|70571980 hsa-miR-5196-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6780b-5p 1 0 0
chr16:70571798|70571980 hsa-miR-10396a-5p 1 0 0
chr16:70571798|70571980 hsa-miR-10526-3p 1 0 0
chr16:70571798|70571980 hsa-miR-328-5p 1 0 0
chr16:70571798|70571980 hsa-miR-4649-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6729-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6794-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6846-5p 1 1 0
chr16:70571798|70571980 hsa-miR-6848-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6858-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6883-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6887-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6885-5p 1 0 0
chr16:70571798|70571980 hsa-miR-939-5p 1 0 0
chr16:70571798|70571980 hsa-miR-30c-1-3p 1 0 0
chr16:70571798|70571980 hsa-miR-6731-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6856-5p 1 0 0
chr16:70571798|70571980 hsa-miR-4665-5p 1 1 0
chr16:70571798|70571980 hsa-miR-3173-3p 1 1 0
chr16:70571798|70571980 hsa-miR-4646-5p 1 0 0
chr16:70571798|70571980 hsa-miR-4747-5p 1 1 0
chr16:70571798|70571980 hsa-miR-6891-5p 1 0 0
chr16:70571798|70571980 hsa-miR-4716-3p 1 0 0
chr16:70571798|70571980 hsa-miR-6785-5p 1 0 0
chr16:70571798|70571980 hsa-miR-4756-5p 1 0 0
chr16:70571798|70571980 hsa-miR-6733-5p 0 1 0
chr16:70571798|70571980 hsa-miR-3064-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:70571798|70571980
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MSPPFPVGLARDCVFCFPHHHHCHLASAMWQEGDWIIKTAL
Nucleotide Sequence CTGAGCCCTCCTTTCCCGGTGGGGCTTGCCAGAGACTGTGTGTTTTGTTTCCCCCACCACCATCACTGCCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATTATGA
CircID chr16:70571798|70571980
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MPETVCFVSPTTITATWLLPCGRRVTG
Nucleotide Sequence TTGCCAGAGACTGTGTGTTTTGTTTCCCCCACCACCATCACTGCCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAA
CircID chr16:70571798|70571980
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MPHGRSQVAVMVVGETKHTVSGKPHRERRAQKA
Nucleotide Sequence CTGCCACATGGCAGAAGCCAGGTGGCAGTGATGGTGGTGGGGGAAACAAAACACACAGTCTCTGGCAAGCCCCACCGGGAAAGGAGGGCTCAGAAGGCGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab