CircRNA Information

General Information
circRNA Basic Information
CircID chr16:74452589|74452763
Strand -
CircType exon
Host Gene ENSG00000090863.10;
Algorism CIRI2;
Sequence GGCTGCCCACCCACGCCTCGGTGAAGACCACGGCCCTGGCGAGGCCCCAAGGTGCTTCTGAGAGATGAACGAGACACCTCAGTCATGGCACACTGGGTGGTGTGCTTCCCCTCCAAGTCCTGTCTTTGTTTTACACAGTCATATGAAAGACATAACCCCATTGCCCAAATCAAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:74452589|74452763 hsa-miR-412-5p 0 0 1
chr16:74452589|74452763 hsa-miR-412-3p 0 0 1
chr16:74452589|74452763 hsa-miR-511-5p 0 0 1
chr16:74452589|74452763 hsa-miR-511-3p 0 0 1
chr16:74452589|74452763 hsa-miR-432-5p 0 0 1
chr16:74452589|74452763 hsa-miR-432-3p 0 0 1
chr16:74452589|74452763 hsa-miR-648 0 1 1
chr16:74452589|74452763 hsa-miR-892a 0 0 1
chr16:74452589|74452763 hsa-miR-890 0 0 1
chr16:74452589|74452763 hsa-miR-541-5p 0 0 1
chr16:74452589|74452763 hsa-miR-541-3p 0 0 1
chr16:74452589|74452763 hsa-miR-943 0 0 1
chr16:74452589|74452763 hsa-miR-1227-5p 0 0 1
chr16:74452589|74452763 hsa-miR-1227-3p 0 0 1
chr16:74452589|74452763 hsa-miR-1293 0 0 1
chr16:74452589|74452763 hsa-miR-199a-5p 0 1 1
chr16:74452589|74452763 hsa-miR-654-5p 0 0 1
chr16:74452589|74452763 hsa-miR-654-3p 0 0 1
chr16:74452589|74452763 hsa-miR-199b-5p 0 1 1
chr16:74452589|74452763 hsa-miR-220b 0 0 1
chr16:74452589|74452763 hsa-miR-768-5p 0 0 1
chr16:74452589|74452763 hsa-miR-608 1 0 0
chr16:74452589|74452763 hsa-miR-2861 1 0 0
chr16:74452589|74452763 hsa-miR-3147 1 0 0
chr16:74452589|74452763 hsa-miR-4439 1 0 0
chr16:74452589|74452763 hsa-miR-4463 1 0 0
chr16:74452589|74452763 hsa-miR-4514 1 0 0
chr16:74452589|74452763 hsa-miR-4656 1 0 0
chr16:74452589|74452763 hsa-miR-4739 1 0 0
chr16:74452589|74452763 hsa-miR-4700-3p 1 0 0
chr16:74452589|74452763 hsa-miR-7160-5p 1 0 0
chr16:74452589|74452763 hsa-miR-6759-5p 0 1 0
chr16:74452589|74452763 hsa-miR-6748-5p 0 1 0
chr16:74452589|74452763 hsa-miR-5006-5p 1 0 0
chr16:74452589|74452763 hsa-miR-3127-5p 1 0 0
chr16:74452589|74452763 hsa-miR-6789-5p 1 0 0
chr16:74452589|74452763 hsa-miR-6828-5p 0 1 0
chr16:74452589|74452763 hsa-miR-3189-3p 0 1 0
chr16:74452589|74452763 hsa-miR-6813-3p 0 1 0
chr16:74452589|74452763 hsa-miR-1296-5p 0 1 0
chr16:74452589|74452763 hsa-miR-6857-3p 0 1 0
chr16:74452589|74452763 hsa-miR-6893-5p 1 0 0
chr16:74452589|74452763 hsa-miR-1343-5p 1 0 0
chr16:74452589|74452763 hsa-miR-6752-5p 1 0 0
chr16:74452589|74452763 hsa-miR-6808-5p 1 0 0
chr16:74452589|74452763 hsa-miR-1909-3p 1 0 0
chr16:74452589|74452763 hsa-miR-4685-5p 1 1 0
chr16:74452589|74452763 hsa-miR-365b-5p 1 1 0
chr16:74452589|74452763 hsa-miR-3085-5p 1 0 0
chr16:74452589|74452763 hsa-miR-6790-5p 1 0 0
chr16:74452589|74452763 hsa-miR-769-3p 1 0 0
chr16:74452589|74452763 hsa-miR-3130-5p 0 1 0
chr16:74452589|74452763 hsa-miR-4482-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr16:74452589|74452763
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MRDERDTSVMAHWVVCFPSKSCLCFTQSYERHNPIAQIK
Nucleotide Sequence CTGAGAGATGAACGAGACACCTCAGTCATGGCACACTGGGTGGTGTGCTTCCCCTCCAAGTCCTGTCTTTGTTTTACACAGTCATATGAAAGACATAACCCCATTGCCCAAATCAAG

CircID chr16:74452589|74452763
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MNETPQSWHTGWCASPPSPVFVLHSHMKDITPLPKSS
Nucleotide Sequence ATGAACGAGACACCTCAGTCATGGCACACTGGGTGGTGTGCTTCCCCTCCAAGTCCTGTCTTTGTTTTACACAGTCATATGAAAGACATAACCCCATTGCCCAAATCAAGC

CircID chr16:74452589|74452763
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MRCLVHLSEAPWGLARAVVFTEAWVGS
Nucleotide Sequence CTGAGGTGTCTCGTTCATCTCTCAGAAGCACCTTGGGGCCTCGCCAGGGCCGTGGTCTTCACCGAGGCGTGGGTGGGCAGC

CircID chr16:74452589|74452763
ORF Type ORF4
Protein Length 57
Nucleotide Length 171
Protein Sequence LIWAMGLCLSYDCVKQRQDLEGKHTTQCAMTEVSRSSLRSTLGPRQGRGLHRGVGGQ
Nucleotide Sequence TTGATTTGGGCAATGGGGTTATGTCTTTCATATGACTGTGTAAAACAAAGACAGGACTTGGAGGGGAAGCACACCACCCAGTGTGCCATGACTGAGGTGTCTCGTTCATCTCTCAGAAGCACCTTGGGGCCTCGCCAGGGCCGTGGTCTTCACCGAGGCGTGGGTGGGCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites