CircRNA Information

General Information
circRNA Basic Information
CircID chr16:75229390|75229690
Strand -
CircType exon
Host Gene ENSG00000050820.15;
Algorism CIRI2;
Sequence CAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATGGGAGCCAGGGAGCTGGGACCGCCGCACCCCTCCCCTGCCTCCCTCCTGGGGTCACCACCCTCAGGCGGCTGCCAGCTGGCCTAGGACGCGGCGGAACTGCTGGGTGCTGTGGCCCAGCTCCTTGACCCTCTCCACCATGTCCTGGGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATGCCGCGCAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:75229390|75229690 hsa-miR-149-5p 0 0 1
chr16:75229390|75229690 hsa-miR-149-3p 0 0 1
chr16:75229390|75229690 hsa-miR-185-5p 0 0 1
chr16:75229390|75229690 hsa-miR-185-3p 0 0 1
chr16:75229390|75229690 hsa-miR-370-5p 0 0 1
chr16:75229390|75229690 hsa-miR-370-3p 0 0 1
chr16:75229390|75229690 hsa-miR-335-5p 0 0 1
chr16:75229390|75229690 hsa-miR-335-3p 0 0 1
chr16:75229390|75229690 hsa-miR-588 0 0 1
chr16:75229390|75229690 hsa-miR-650 0 0 1
chr16:75229390|75229690 hsa-miR-660-5p 0 0 1
chr16:75229390|75229690 hsa-miR-660-3p 0 0 1
chr16:75229390|75229690 hsa-miR-675-5p 0 0 1
chr16:75229390|75229690 hsa-miR-675-3p 0 0 1
chr16:75229390|75229690 hsa-miR-708-5p 0 0 1
chr16:75229390|75229690 hsa-miR-708-3p 0 0 1
chr16:75229390|75229690 hsa-miR-665 0 1 1
chr16:75229390|75229690 hsa-miR-937-5p 0 0 1
chr16:75229390|75229690 hsa-miR-937-3p 0 0 1
chr16:75229390|75229690 hsa-miR-940 1 0 1
chr16:75229390|75229690 hsa-miR-1227-5p 0 0 1
chr16:75229390|75229690 hsa-miR-1227-3p 0 0 1
chr16:75229390|75229690 hsa-miR-1204 0 0 1
chr16:75229390|75229690 hsa-miR-1293 0 0 1
chr16:75229390|75229690 hsa-miR-1321 0 0 1
chr16:75229390|75229690 hsa-miR-1827 0 0 1
chr16:75229390|75229690 hsa-miR-885-3p 0 0 1
chr16:75229390|75229690 hsa-miR-28-5p 0 0 1
chr16:75229390|75229690 hsa-miR-1207-3p 0 0 1
chr16:75229390|75229690 hsa-miR-1207-5p 1 1 1
chr16:75229390|75229690 hsa-miR-342-5p 0 0 1
chr16:75229390|75229690 hsa-miR-220b 0 0 1
chr16:75229390|75229690 hsa-miR-608 1 0 0
chr16:75229390|75229690 hsa-miR-663a 1 0 0
chr16:75229390|75229690 hsa-miR-762 1 0 0
chr16:75229390|75229690 hsa-miR-718 0 1 0
chr16:75229390|75229690 hsa-miR-544b 0 1 0
chr16:75229390|75229690 hsa-miR-3139 0 1 0
chr16:75229390|75229690 hsa-miR-3193 0 1 0
chr16:75229390|75229690 hsa-miR-4301 0 1 0
chr16:75229390|75229690 hsa-miR-4267 0 1 0
chr16:75229390|75229690 hsa-miR-4270 0 1 0
chr16:75229390|75229690 hsa-miR-4436a 0 1 0
chr16:75229390|75229690 hsa-miR-4438 0 1 0
chr16:75229390|75229690 hsa-miR-4479 0 1 0
chr16:75229390|75229690 hsa-miR-4488 1 0 0
chr16:75229390|75229690 hsa-miR-3960 1 0 0
chr16:75229390|75229690 hsa-miR-4739 1 1 0
chr16:75229390|75229690 hsa-miR-6070 0 1 0
chr16:75229390|75229690 hsa-miR-6075 0 1 0
chr16:75229390|75229690 hsa-miR-6127 0 1 0
chr16:75229390|75229690 hsa-miR-6129 0 1 0
chr16:75229390|75229690 hsa-miR-6133 0 1 0
chr16:75229390|75229690 hsa-miR-7974 0 1 0
chr16:75229390|75229690 hsa-miR-4731-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6840-3p 0 1 0
chr16:75229390|75229690 hsa-miR-4665-3p 1 0 0
chr16:75229390|75229690 hsa-miR-4433a-3p 1 0 0
chr16:75229390|75229690 hsa-miR-6765-5p 1 0 0
chr16:75229390|75229690 hsa-miR-7106-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6825-5p 1 1 0
chr16:75229390|75229690 hsa-miR-6089 1 1 0
chr16:75229390|75229690 hsa-miR-1301-3p 1 0 0
chr16:75229390|75229690 hsa-miR-7845-5p 0 1 0
chr16:75229390|75229690 hsa-miR-6841-3p 0 1 0
chr16:75229390|75229690 hsa-miR-6742-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6798-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6782-5p 1 1 0
chr16:75229390|75229690 hsa-miR-6882-3p 0 1 0
chr16:75229390|75229690 hsa-miR-4640-5p 1 0 0
chr16:75229390|75229690 hsa-miR-652-5p 1 0 0
chr16:75229390|75229690 hsa-miR-4787-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6736-3p 0 1 0
chr16:75229390|75229690 hsa-miR-6824-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6789-5p 1 0 0
chr16:75229390|75229690 hsa-miR-1184 1 1 0
chr16:75229390|75229690 hsa-miR-3065-3p 0 1 0
chr16:75229390|75229690 hsa-miR-4707-5p 1 0 0
chr16:75229390|75229690 hsa-miR-7106-3p 0 1 0
chr16:75229390|75229690 hsa-miR-6871-3p 0 1 0
chr16:75229390|75229690 hsa-miR-6868-5p 0 1 0
chr16:75229390|75229690 hsa-miR-4746-5p 0 1 0
chr16:75229390|75229690 hsa-miR-4717-5p 0 1 0
chr16:75229390|75229690 hsa-miR-2116-3p 0 1 0
chr16:75229390|75229690 hsa-miR-431-5p 1 0 0
chr16:75229390|75229690 hsa-miR-4423-5p 0 1 0
chr16:75229390|75229690 hsa-miR-885-5p 0 1 0
chr16:75229390|75229690 hsa-miR-4763-3p 1 1 0
chr16:75229390|75229690 hsa-miR-6787-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6816-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6893-5p 0 1 0
chr16:75229390|75229690 hsa-miR-6775-5p 0 1 0
chr16:75229390|75229690 hsa-miR-6737-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6752-5p 1 1 0
chr16:75229390|75229690 hsa-miR-6754-5p 0 1 0
chr16:75229390|75229690 hsa-miR-6756-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6803-5p 1 1 0
chr16:75229390|75229690 hsa-miR-1249-5p 0 1 0
chr16:75229390|75229690 hsa-miR-6722-3p 1 1 0
chr16:75229390|75229690 hsa-miR-6779-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6797-5p 0 1 0
chr16:75229390|75229690 hsa-miR-6808-5p 0 1 0
chr16:75229390|75229690 hsa-miR-7111-5p 0 1 0
chr16:75229390|75229690 hsa-miR-3620-5p 1 0 0
chr16:75229390|75229690 hsa-miR-4728-5p 1 1 0
chr16:75229390|75229690 hsa-miR-1909-3p 1 1 0
chr16:75229390|75229690 hsa-miR-328-5p 1 1 0
chr16:75229390|75229690 hsa-miR-4649-5p 1 0 0
chr16:75229390|75229690 hsa-miR-4685-5p 1 1 0
chr16:75229390|75229690 hsa-miR-6729-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6883-5p 0 1 0
chr16:75229390|75229690 hsa-miR-3085-5p 0 1 0
chr16:75229390|75229690 hsa-miR-6785-5p 0 1 0
chr16:75229390|75229690 hsa-miR-6724-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6893-3p 0 1 0
chr16:75229390|75229690 hsa-miR-9851-5p 1 0 0
chr16:75229390|75229690 hsa-miR-6829-3p 0 1 0
chr16:75229390|75229690 hsa-miR-4756-5p 1 0 0
chr16:75229390|75229690 hsa-miR-4701-5p 0 1 0
chr16:75229390|75229690 hsa-miR-6764-5p 0 1 0
chr16:75229390|75229690 hsa-miR-7973 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr16:75229390|75229690
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MGTARQRPWWWPRCRAGGRTAGCCSGS
Nucleotide Sequence ATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATGCCGCGCAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCA

CircID chr16:75229390|75229690
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MGARELGPPHPSPASLLGSPPSGGCQLA
Nucleotide Sequence ATGGGAGCCAGGGAGCTGGGACCGCCGCACCCCTCCCCTGCCTCCCTCCTGGGGTCACCACCCTCAGGCGGCTGCCAGCTGGCCTAG

CircID chr16:75229390|75229690
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MLGAVAQLLDPLHHVLGRGRRWVLQGSGLGGGHDAAQEVAQQVAVVGH
Nucleotide Sequence CTGCTGGGTGCTGTGGCCCAGCTCCTTGACCCTCTCCACCATGTCCTGGGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATGCCGCGCAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCAC

CircID chr16:75229390|75229690
ORF Type ORF4
Protein Length 79
Nucleotide Length 240
Protein Sequence MTWEPGSWDRRTPPLPPSWGHHPQAAASWPRTRRNCWVLWPSSLTLSTMSWAAEGDGYCKAAALVVATMPRRRSHSRLL
Nucleotide Sequence TTGACATGGGAGCCAGGGAGCTGGGACCGCCGCACCCCTCCCCTGCCTCCCTCCTGGGGTCACCACCCTCAGGCGGCTGCCAGCTGGCCTAGGACGCGGCGGAACTGCTGGGTGCTGTGGCCCAGCTCCTTGACCCTCTCCACCATGTCCTGGGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATGCCGCGCAGGAGGTCGCACAGCAGGTTGCTGTAG

CircID chr16:75229390|75229690
ORF Type ORF5
Protein Length 53
Nucleotide Length 162
Protein Sequence MLCDLLRGIVATTKAAALQYPSPSAAQDMVERVKELGHSTQQFRRVLGQLAAA
Nucleotide Sequence CTGCTGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTGA

CircID chr16:75229390|75229690
ORF Type ORF6
Protein Length 31
Nucleotide Length 96
Protein Sequence MPCSTHRLPRPRTWWRGSRSWATAPSSSAAS
Nucleotide Sequence CTGCCTTGCAGTACCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCTAG

CircID chr16:75229390|75229690
ORF Type ORF7
Protein Length 41
Nucleotide Length 123
Protein Sequence MRVVTPGGRQGRGAAVPAPWLPCQESLCHRLRDRTPALRRS
Nucleotide Sequence CTGAGGGTGGTGACCCCAGGAGGGAGGCAGGGGAGGGGTGCGGCGGTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites